BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0246.0006.p (892 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771453.1| hypothetical protein blr4813 [Bradyrhizobium ja... 958 0.0 ref|YP_001240427.1| diguanylate cyclase/phosphodiesterase [Brady... 943 0.0 ref|NP_946130.1| diguanylate cyclase/phosphodiesterase [Rhodopse... 914 0.0 ref|YP_001989878.1| PAS/PAC sensor-containing diguanylate cyclas... 914 0.0 ref|YP_488238.1| diguanylate cyclase/phosphodiesterase [Rhodopse... 913 0.0 >ref|NP_771453.1| hypothetical protein blr4813 [Bradyrhizobium japonicum USDA 110] dbj|BAC50078.1| blr4813 [Bradyrhizobium japonicum USDA 110] Length = 917 Score = 958 bits (2476), Expect = 0.0, Method: Compositional matrix adjust. Identities = 481/878 (54%), Positives = 620/878 (70%), Gaps = 11/878 (1%) Query: 17 RMGAIQWLVLSAALLVLAITLGTGYLALQFRERALEMSERELNNTALLLSRHFDQQLTDL 76 R G I+WLV+ LL+ AI +G +A FRERAL S REL NT L+L+ HFDQQL D Sbjct: 23 RSGPIRWLVVGGTLLIAAIAVGAVLMAQNFRERALRNSGRELENTVLMLAHHFDQQLQDF 82 Query: 77 QHVHDDIVNYLRAEQVETADQFEKNMSLLSAHEMLRTRLAALPHVGGLNLFNAKGWLINS 136 + D V+++R + +A+ + K +S H +LR+++ ALP++GG+N+ +A+G LINS Sbjct: 83 AVIQKDFVDHVRTIGIASAEDYRKRLSGQDIHRLLRSKIEALPYMGGVNVIDAEGNLINS 142 Query: 137 SEMWPVPDISVADRRYFREFTSGRPTSPVIVEPAMSKVTGNWTTIFARKITGRNGEIIGF 196 S WP P ++VADR YFR F V++EP S+++G WT + RKI G NGE +G Sbjct: 143 STAWPAPKVNVADRAYFRAFRYAPDAPDVLIEPVHSRISGAWTILIVRKIVGPNGEFMGV 202 Query: 197 ASRGVEPSHFEDFVASLALSGDTVISMIHRDGTIIARYPQDAAVIGRNIINLPVFQKVIS 256 RG+EP++FE F S+ L ISM+HRDGT++ARYP ++GRN N P Q+ + Sbjct: 203 VGRGIEPANFEKFFESVVLGEGATISMLHRDGTLLARYPHSGELMGRNFRNGPFSQQRVF 262 Query: 257 FGGNTSGRFVG-ASGEENVGAVRSLSHFPILILATTKTSSALEDWRTQTKLQFCAAVLAV 315 + +GRFV GE+ + A +L HFPIL++ATT ++AL DWR Q + A + Sbjct: 263 GLDHFAGRFVSPVDGEDRLIASHALPHFPILMMATTTRAAALTDWREQIGILISVAASSA 322 Query: 316 LIISFAVFLIVRQLQRQHDAASRRLSEKSQHLDTAINTMTQGLLLFDASARLVICNQQYI 375 L I+ + IVR+L QH + RL+ + Q LD A+N MTQGLLLFDA RLV+CNQ+YI Sbjct: 323 LAIAGVLIAIVRKLLEQHRLSRERLTLEKQRLDRAVNNMTQGLLLFDAEQRLVVCNQRYI 382 Query: 376 DMFGLSPDVARPGCHLRDLILHRQAIGSFVGDVDEYCARFTNPRGD-EVRDSVIM-TPDG 433 +M+GLSP+V +PG D+I HR A GSF GDVD Y AR GD R+S+++ T DG Sbjct: 383 EMYGLSPEVVKPGSSFHDIIAHRSATGSFTGDVDGYVARVL---GDIHARNSMVVDTADG 439 Query: 434 RSIRLIYKRAPDGGWATTLEDVTDGRRAQARIEYLAHYDALTNLPNRTLFQRHAEGLLLE 493 RSI ++ + DGGW T ED+T+ RR + RI +LAHYDALT+LPNR +F H L Sbjct: 440 RSIHILNEPLADGGWVATHEDITERRRIEERITHLAHYDALTDLPNRAMFHEHLRQELAA 499 Query: 494 AATRE-FAIHYIDIDEFKRINDTLGHLIGDEFLRRVAEKLRQSVGSNDFIARLGGDEFAI 552 E A+HYIDIDEFK +ND LGHL+GDE L+ VA L + G DF+ARLGGDEFAI Sbjct: 500 ITDGEAIAVHYIDIDEFKGVNDALGHLVGDELLKSVATSLSRCAGPADFVARLGGDEFAI 559 Query: 553 VQHDITSDDDVGDLVARIYQSLRTPFDCLGHHLSSDASIGIAIAPRHGSDLFRLLKCADL 612 VQ +TS D V DLVAR++Q++R PFDC+GHHL++DASIGIA+AP HG+ L ++LK ADL Sbjct: 560 VQGAVTSPDQVNDLVARVFQAIRAPFDCMGHHLTTDASIGIALAPGHGTVLDQILKNADL 619 Query: 613 AMYAAKAAGRRTHRFFDPAMEAQANLRRALEADLRTALA----EGGFELHYQPLVDLRSD 668 AMYAAK+AGRRT+RFF+P M+A+ RR LE DLR A+A EGG E++YQP + L+ D Sbjct: 620 AMYAAKSAGRRTYRFFEPEMDAKVRERRQLEIDLRHAIAQGGLEGGLEVYYQPCLGLKDD 679 Query: 669 EVTGCEALLRWRHPMRGMISPAEFIPVAEETGLIEEIGQWVLHTACTEAAAWPAHVRVAV 728 +TGCEAL+RWRHP RGM+SPAEFIP+AE+TGLI EIG+WVL TAC +AA+WP +R+AV Sbjct: 680 RITGCEALVRWRHPERGMVSPAEFIPIAEDTGLINEIGEWVLATACRDAASWPDDIRLAV 739 Query: 729 NVSPIQFKSETLALKVAHALAESGLDPRRLELEITEAVLIADDDAALVTLGQLRALGVHI 788 NVSP+QFKS TLALK+ ALA S RLELEITEAVLI DDD AL L QLRA+GV I Sbjct: 740 NVSPVQFKSGTLALKIMAALAASNFPASRLELEITEAVLIRDDDTALAILHQLRAIGVRI 799 Query: 789 ALDDFGTGYSSLQYLQRFPFDKIKIDRSFVKEVTRNSGSASIIRAVVSIAADRNMITTAE 848 ALDDFGTGYSSL YL RFPFDKIKIDR FV ++ GSASI++AVV++AA R M TTAE Sbjct: 800 ALDDFGTGYSSLSYLHRFPFDKIKIDRCFVNDIAGPDGSASIVQAVVNLAAARRMTTTAE 859 Query: 849 GVETDQQRDTVQMLGCTQMQGYLFSRPVPARDLRTLLA 886 GVET++Q+ ++ LGC++MQGYLFS PA + L A Sbjct: 860 GVETEEQQRLLRTLGCSEMQGYLFSAAKPADKVLELFA 897 >ref|YP_001240427.1| diguanylate cyclase/phosphodiesterase [Bradyrhizobium sp. BTAi1] gb|ABQ36521.1| diguanylate cyclase/phosphodiesterase [Bradyrhizobium sp. BTAi1] Length = 907 Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust. Identities = 471/876 (53%), Positives = 633/876 (72%), Gaps = 6/876 (0%) Query: 15 ASRMGAIQWLVLSAALLVLAITLGTGYLALQFRERALEMSERELNNTALLLSRHFDQQLT 74 A G I+WL+ L+ AI +G +A FRERAL + REL NT LLL+RHFDQQ+ Sbjct: 15 ADHGGPIRWLIGGGLTLIAAIAIGATIMADSFRERALNSATRELENTVLLLARHFDQQME 74 Query: 75 DLQHVHDDIVNYLRAEQVETADQFEKNMSLLSAHEMLRTRLAALPHVGGLNLFNAKGWLI 134 DL + D+ +Y+R ++TA +F + M + ML+++L+A+ +VGG+++F+++G LI Sbjct: 75 DLGAIQRDLADYVRQRHIDTAARFREQMGSAPVNAMLQSKLSAVSYVGGVSIFDSEGNLI 134 Query: 135 NSSEMWPVPDISVADRRYFREFTSGRPTSP-VIVEPAMSKVTGNWTTIFARKITGRNGEI 193 NS+ WPVP I+VADR YF+ P SP +++EP +S+VTG + A K+T NGE Sbjct: 135 NSATSWPVPAINVADRGYFQRLKFD-PASPQLLIEPVVSRVTGTHVAVIALKLTAPNGEF 193 Query: 194 IGFASRGVEPSHFEDFVASLALSGDTVISMIHRDGTIIARYPQDAAVIGRNIINLPVFQK 253 +G +R +EP + E F AS+AL + ISM+HRDGT++AR+P+ ++ +N + P+F++ Sbjct: 194 LGVIARSLEPVNVERFFASVALGPEAAISMMHRDGTLLARHPRHEGMLNQNYKDAPIFRQ 253 Query: 254 VISFGGNTSGRFVGASGEEN-VGAVRSLSHFPILILATTKTSSALEDWRTQTKLQFCAAV 312 +++ GNT+G F E+ +GA L+ +P+++ ATT S+AL DWR Q + V Sbjct: 254 ILAGDGNTTGIFSSPVDREHRIGASHRLTSYPLIVTATTTVSAALADWREQMRFLIGVGV 313 Query: 313 LAVLIISFAVFLIVRQLQRQHDAASRRLSEKSQHLDTAINTMTQGLLLFDASARLVICNQ 372 +VL+I+ ++++VR+L H+A+++RL+ + + LD A+N MTQGLL+FDAS RLVI NQ Sbjct: 314 TSVLLIAGMLYVVVRRLISDHEASNQRLTLEKERLDKAVNNMTQGLLMFDASERLVISNQ 373 Query: 373 QYIDMFGLSPDVARPGCHLRDLILHRQAIGSFVGDVDEYCARFTNPRGDEVRDSVIMTPD 432 +YI+M+GLS DV +PGC R+LI HR+A GSF+GD EY A G + + +I TPD Sbjct: 374 RYIEMYGLSADVVKPGCTFRELIAHRKATGSFIGDEAEYVATILRDIGRK-KSHLIETPD 432 Query: 433 GRSIRLIYKRAPDGGWATTLEDVTDGRRAQARIEYLAHYDALTNLPNRTLF-QRHAEGLL 491 GRSI ++ + DGGW T ED+T+ R+A+ RI +LAHYDALT LPNRTLF +R + L+ Sbjct: 433 GRSIEIVNEPLADGGWLATHEDITERRKAEQRITHLAHYDALTELPNRTLFHERLKQELI 492 Query: 492 LEAATREFAIHYIDIDEFKRINDTLGHLIGDEFLRRVAEKLRQSVGSNDFIARLGGDEFA 551 +A + A+HYIDIDEFK +ND+LGHLIGDE L+ VA L VG F+ARLGGDEFA Sbjct: 493 HVSAGQRLALHYIDIDEFKGVNDSLGHLIGDELLKSVAASLSTCVGEAGFVARLGGDEFA 552 Query: 552 IVQHDITSDDDVGDLVARIYQSLRTPFDCLGHHLSSDASIGIAIAPRHGSDLFRLLKCAD 611 +VQ I + DV L+ I ++R P DCLGH L++DASIG+A+ P HG++L +++K AD Sbjct: 553 VVQTGIRNRGDVEQLIEDILAAIRAPRDCLGHQLTADASIGVALIPEHGTELDQIMKNAD 612 Query: 612 LAMYAAKAAGRRTHRFFDPAMEAQANLRRALEADLRTALAEGGFELHYQPLVDLRSDEVT 671 LAMYAAK AGRRT RFF+P M+AQ R LE DLR A+ + E++YQP V L+ D + Sbjct: 613 LAMYAAKGAGRRTWRFFEPEMDAQVKARHQLEVDLRQAMVDDQLEVYYQPCVSLQDDRIV 672 Query: 672 GCEALLRWRHPMRGMISPAEFIPVAEETGLIEEIGQWVLHTACTEAAAWPAHVRVAVNVS 731 GCEAL+RW+HP+RG +SPAEFIP+AE+TGLI ++G+ VLH AC EAA WP +R+AVNVS Sbjct: 673 GCEALVRWKHPVRGNVSPAEFIPIAEDTGLINQLGERVLHLACAEAATWPDDIRLAVNVS 732 Query: 732 PIQFKSETLALKVAHALAESGLDPRRLELEITEAVLIADDDAALVTLGQLRALGVHIALD 791 P+QFKS TLALKVAHALA SGL P RLELEITEAVLI DDD AL TL QLRALGV IALD Sbjct: 733 PVQFKSGTLALKVAHALATSGLSPHRLELEITEAVLIRDDD-ALDTLHQLRALGVRIALD 791 Query: 792 DFGTGYSSLQYLQRFPFDKIKIDRSFVKEVTRNSGSASIIRAVVSIAADRNMITTAEGVE 851 DFGTGYSSL YLQR PFDKIKIDR FVK++T + GSASI++AVV+IAA R M TTAEGVE Sbjct: 792 DFGTGYSSLSYLQRIPFDKIKIDRCFVKDITESEGSASIVQAVVNIAAIRKMSTTAEGVE 851 Query: 852 TDQQRDTVQMLGCTQMQGYLFSRPVPARDLRTLLAA 887 T+ QR ++ LGC++MQGYLFS P PA D+R+L A Sbjct: 852 TEAQRQVLKRLGCSEMQGYLFSPPKPAADVRSLFKA 887 >ref|NP_946130.1| diguanylate cyclase/phosphodiesterase [Rhodopseudomonas palustris CGA009] emb|CAE26221.1| putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain [Rhodopseudomonas palustris CGA009] Length = 904 Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust. Identities = 460/882 (52%), Positives = 609/882 (69%), Gaps = 8/882 (0%) Query: 8 SIKGALRASRMGAIQWLVLSAALLVLAITLGTGYLALQFRERALEMSERELNNTALLLSR 67 S+ G LR + I WL+LS ALL+ I + T F+E+AL EREL+NTALLL+ Sbjct: 22 SVAGMLR---LRPILWLILSGALLIAGIAVTTTLTVSNFKEKALRNGERELSNTALLLAL 78 Query: 68 HFDQQLTDLQHVHDDIVNYLRAEQVETADQFEKNMSLLSAHEMLRTRLAALPHVGGLNLF 127 H+D+++ D + +DIV R Q +A+ F M+ L+ H+ LR+R + L +F Sbjct: 79 HYDREIDDFLAMQNDIVTTARQMQQPSAEAFGGTMATLAMHQTLRSRARGANEITALKIF 138 Query: 128 NAKGWLINSSEMWPVPDISVADRRYFREFTSGRPTSPVIVEPAMSKVTGNWTTIFARKIT 187 +A G LIN+S++WPVP +S+AD+RYF + SG V V + + G W+ + A+++T Sbjct: 139 DAGGTLINTSDVWPVPVLSIADQRYFLDHKSGMAQR-VTVALEQNALAGGWSIVLAQRLT 197 Query: 188 GRNGEIIGFASRGVEPSHFEDFVASLALSGDTVISMIHRDGTIIARYPQDAAVIGRNIIN 247 +GE +G +R + P+HF+ F++ ++L G++ +SM H DGT++ R+P +IGRN + Sbjct: 198 AADGEFLGVVTRAITPAHFDRFLSQVSLVGESAVSMHHSDGTLLTRHPYAEGMIGRNFRD 257 Query: 248 LPVFQKVISFGGNTSGRFVGA-SGEENVGAVRSLSHFPILILATTKTSSALEDWRTQTKL 306 P+ Q+ + F +T+ R G++ + A +L+ PI+++ TT T AL WRTQTKL Sbjct: 258 GPLQQQAM-FDDDTTARLTSPIDGQDRLVASHALTELPIVMVVTTTTEDALASWRTQTKL 316 Query: 307 QFCAAVLAVLIISFAVFLIVRQLQRQHDAASRRLSEKSQHLDTAINTMTQGLLLFDASAR 366 A ++ L+++ + LI+ Q+ + H A R+L Q LDTAIN M+QGLLLFDA AR Sbjct: 317 MVSVAAVSALVVTVILLLIIHQIGKHHRATQRKLQLDKQRLDTAINNMSQGLLLFDAQAR 376 Query: 367 LVICNQQYIDMFGLSPDVARPGCHLRDLILHRQAIGSFVGDVDEYCARFTNPRGDEVRDS 426 LVICNQ+Y++M+GLSPDV +PGC LRD++ HR++ GS G+VD+ + R R S Sbjct: 377 LVICNQRYMEMYGLSPDVVKPGCSLRDVLEHRKSTGSLGGNVDKITTDLID-RLSSQRVS 435 Query: 427 VIMTPDGRSIRLIYKRAPDGGWATTLEDVTDGRRAQARIEYLAHYDALTNLPNRTLFQRH 486 I + RSI P GGW T ED T+ +R RI YLAH+D+LT+LPNRT+F++ Sbjct: 436 EIHSIHDRSIEFSSVPVPGGGWVITHEDATERKRYDERISYLAHFDSLTDLPNRTMFRQR 495 Query: 487 AEGLLLEAA-TREFAIHYIDIDEFKRINDTLGHLIGDEFLRRVAEKLRQSVGSNDFIARL 545 E L A+ FA+ YIDIDEFK INDTLGH +GDE L++VA +LR V DF+ARL Sbjct: 496 LENELQRASRGAPFALLYIDIDEFKSINDTLGHPVGDELLKQVAVRLRDCVRETDFVARL 555 Query: 546 GGDEFAIVQHDITSDDDVGDLVARIYQSLRTPFDCLGHHLSSDASIGIAIAPRHGSDLFR 605 GGDEFAI+Q ++ D+ LV RIY+S+R P+ CLGH LS+DASIGIAIAPR G+DL + Sbjct: 556 GGDEFAIIQIGVSGADEATALVDRIYESIRLPYQCLGHQLSTDASIGIAIAPRDGADLDQ 615 Query: 606 LLKCADLAMYAAKAAGRRTHRFFDPAMEAQANLRRALEADLRTALAEGGFELHYQPLVDL 665 L+K ADLAMY+AKA GRRT RFF+P M+A A RR LE DLR A+ + GFE+HYQP VDL Sbjct: 616 LVKNADLAMYSAKAEGRRTFRFFEPEMDAVAKTRRQLEFDLRQAIGDRGFEVHYQPQVDL 675 Query: 666 RSDEVTGCEALLRWRHPMRGMISPAEFIPVAEETGLIEEIGQWVLHTACTEAAAWPAHVR 725 S +TGCEALLRWRHP RGMISPAEFIP+AE+TGLI EIG W L TAC+EAA W A + Sbjct: 676 SSGAITGCEALLRWRHPTRGMISPAEFIPIAEDTGLINEIGAWTLATACSEAATWDADIT 735 Query: 726 VAVNVSPIQFKSETLALKVAHALAESGLDPRRLELEITEAVLIADDDAALVTLGQLRALG 785 +AVN+SP+QF+ +LAL VA L +GL RLELE+TEAVLI DDDAAL TL QLRALG Sbjct: 736 LAVNISPVQFRQPSLALLVASVLGAAGLPAERLELEVTEAVLIHDDDAALSTLTQLRALG 795 Query: 786 VHIALDDFGTGYSSLQYLQRFPFDKIKIDRSFVKEVTRNSGSASIIRAVVSIAADRNMIT 845 V I+LDDFGTGYSSL YLQRFPFDKIKIDRSF+ + GS +I++AVV+IAA R M T Sbjct: 796 VRISLDDFGTGYSSLSYLQRFPFDKIKIDRSFIDGIDTTEGSTAIVQAVVNIAAARRMTT 855 Query: 846 TAEGVETDQQRDTVQMLGCTQMQGYLFSRPVPARDLRTLLAA 887 TAEGVET +QR+ + LGCTQMQG+LFS VPA R LL + Sbjct: 856 TAEGVETARQREILSTLGCTQMQGWLFSPAVPAAAFRKLLTS 897 >ref|YP_001989878.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase [Rhodopseudomonas palustris TIE-1] gb|ACE99402.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) [Rhodopseudomonas palustris TIE-1] Length = 879 Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust. Identities = 457/873 (52%), Positives = 606/873 (69%), Gaps = 5/873 (0%) Query: 17 RMGAIQWLVLSAALLVLAITLGTGYLALQFRERALEMSERELNNTALLLSRHFDQQLTDL 76 R+ I WL+LS ALL+ I + T F+E+AL EREL+NTALLL+ H+D+++ D Sbjct: 3 RLRPILWLILSGALLIAGIAVTTTLTVSNFKEKALRNGERELSNTALLLALHYDREIDDF 62 Query: 77 QHVHDDIVNYLRAEQVETADQFEKNMSLLSAHEMLRTRLAALPHVGGLNLFNAKGWLINS 136 + +DIV R Q +A+ F M+ L+ H+ LR+R + L +F+A G LIN+ Sbjct: 63 LAMQNDIVTTARQMQQPSAEAFGGTMATLAMHQTLRSRARGANEITALKIFDAGGTLINT 122 Query: 137 SEMWPVPDISVADRRYFREFTSGRPTSPVIVEPAMSKVTGNWTTIFARKITGRNGEIIGF 196 S++WPVP +S+AD+RYF + SG V V + + G W+ + A+++T +GE +G Sbjct: 123 SDVWPVPVLSIADQRYFLDHKSG-IAQRVTVALEQNALAGGWSIVLAQRLTAADGEFLGV 181 Query: 197 ASRGVEPSHFEDFVASLALSGDTVISMIHRDGTIIARYPQDAAVIGRNIINLPVFQKVIS 256 +R + P+HF+ F++ ++L G++ +SM H DGT++ R+P +IGRN + P+ Q+ + Sbjct: 182 VTRAITPAHFDRFLSQVSLVGESAVSMHHSDGTLLTRHPYAEGMIGRNFRDGPLQQQAM- 240 Query: 257 FGGNTSGRFVGA-SGEENVGAVRSLSHFPILILATTKTSSALEDWRTQTKLQFCAAVLAV 315 F +T+ R G++ + A +L+ PI+++ TT T AL WRTQTKL A ++ Sbjct: 241 FDDDTTARLTSPIDGQDRLVASHALTELPIVMVVTTTTEDALASWRTQTKLMVSVAAVSA 300 Query: 316 LIISFAVFLIVRQLQRQHDAASRRLSEKSQHLDTAINTMTQGLLLFDASARLVICNQQYI 375 L+++ + LI+ Q+ + H A R+L Q LDTAIN M+QGLLLFDA ARLVICNQ+Y+ Sbjct: 301 LVVTVILLLIIHQIGKHHRATQRKLQLDKQRLDTAINNMSQGLLLFDAQARLVICNQRYM 360 Query: 376 DMFGLSPDVARPGCHLRDLILHRQAIGSFVGDVDEYCARFTNPRGDEVRDSVIMTPDGRS 435 +M+GLSPDV +PGC LRD++ HR++ GS G+VD+ + R R S I + RS Sbjct: 361 EMYGLSPDVVKPGCSLRDVLEHRKSTGSLGGNVDKITTDLID-RLSSQRVSEIHSIHDRS 419 Query: 436 IRLIYKRAPDGGWATTLEDVTDGRRAQARIEYLAHYDALTNLPNRTLFQRHAEGLLLEAA 495 I P GGW T ED T+ +R RI YLAH+D+LT+LPNRT+F++ E L A+ Sbjct: 420 IEFSSVPVPGGGWVITHEDATERKRYDERISYLAHFDSLTDLPNRTMFRQRLENELQRAS 479 Query: 496 T-REFAIHYIDIDEFKRINDTLGHLIGDEFLRRVAEKLRQSVGSNDFIARLGGDEFAIVQ 554 FA+ YIDIDEFK INDTLGH +GDE L++VA +LR V DF+ARLGGDEFAI+Q Sbjct: 480 RGAPFALLYIDIDEFKSINDTLGHPVGDELLKQVAVRLRDCVRETDFVARLGGDEFAIIQ 539 Query: 555 HDITSDDDVGDLVARIYQSLRTPFDCLGHHLSSDASIGIAIAPRHGSDLFRLLKCADLAM 614 ++ D+ LV RIY+S+R P+ CLGH LS+DASIGIAIAPR G+DL +L+K ADLAM Sbjct: 540 IGVSGADEATALVDRIYESIRLPYQCLGHQLSTDASIGIAIAPRDGADLDQLVKNADLAM 599 Query: 615 YAAKAAGRRTHRFFDPAMEAQANLRRALEADLRTALAEGGFELHYQPLVDLRSDEVTGCE 674 Y+AKA GRRT RFF+P M+A A RR LE DLR A+ + GFE+HYQP VDL S +TGCE Sbjct: 600 YSAKAEGRRTFRFFEPEMDAVAKTRRQLEFDLRQAIGDRGFEVHYQPQVDLSSGAITGCE 659 Query: 675 ALLRWRHPMRGMISPAEFIPVAEETGLIEEIGQWVLHTACTEAAAWPAHVRVAVNVSPIQ 734 ALLRWRHP RGMISPAEFIP+AE+TGLI EIG W L TAC+EAA W A + +AVN+SP+Q Sbjct: 660 ALLRWRHPTRGMISPAEFIPIAEDTGLINEIGAWTLATACSEAATWDADITLAVNISPVQ 719 Query: 735 FKSETLALKVAHALAESGLDPRRLELEITEAVLIADDDAALVTLGQLRALGVHIALDDFG 794 F+ +LAL VA L +GL RLELE+TEAVLI DDDAAL TL QLRALGV I+LDDFG Sbjct: 720 FRQPSLALLVASVLGAAGLPAERLELEVTEAVLIHDDDAALSTLTQLRALGVRISLDDFG 779 Query: 795 TGYSSLQYLQRFPFDKIKIDRSFVKEVTRNSGSASIIRAVVSIAADRNMITTAEGVETDQ 854 TGYSSL YLQRFPFDKIKIDRSF+ + GS +I++AVV+IAA R M TTAEGVET + Sbjct: 780 TGYSSLSYLQRFPFDKIKIDRSFIDGIDTTEGSTAIVQAVVNIAAARRMTTTAEGVETAR 839 Query: 855 QRDTVQMLGCTQMQGYLFSRPVPARDLRTLLAA 887 QR+ + LGCTQMQG+LFS VPA R LL++ Sbjct: 840 QREILSTLGCTQMQGWLFSPAVPAAAFRKLLSS 872 >ref|YP_488238.1| diguanylate cyclase/phosphodiesterase [Rhodopseudomonas palustris HaA2] gb|ABD09327.1| diguanylate cyclase/phosphodiesterase [Rhodopseudomonas palustris HaA2] Length = 904 Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust. Identities = 455/864 (52%), Positives = 595/864 (68%), Gaps = 15/864 (1%) Query: 30 LLVLAITLGTGYLALQFRERALEMSERELNNTALLLSRHFDQQLTDLQHVHDDIVNYLRA 89 LL+ AI + T + FR +AL+ SEREL NTA+LL+ H++++L + + ++V +R Sbjct: 41 LLISAIAIVTTMIVGDFRTKALQNSERELANTAMLLAHHYNRELEEFLAIQTEVVALVRQ 100 Query: 90 EQVETADQFEKNMSLLSAHEMLRTRLAALPHVGGLNLFNAKGWLINSSEMWPVPDISVAD 149 Q+++AD F M+ L H+MLR + P + GL +FN +G LIN+S WPVP++S+A+ Sbjct: 101 AQLDSADAFSGQMATLDTHQMLRAKAGTAPELSGLAIFNDRGNLINNSSHWPVPELSIAE 160 Query: 150 RRYFREFTSGRPTSP-VIVEPAMSKVTGNWTTIFARKITGRNGEIIGFASRGVEPSHFED 208 YF+ +G +P VE + + G W + A+++ GE +G SR + P+HFE Sbjct: 161 HSYFQAHKAG--IAPRTTVELVQNTLAGGWAIVLAQRLDNSRGEFVGVVSRSLTPAHFEY 218 Query: 209 FVASLALSGDTVISMIHRDGTIIARYPQDAAVIGRN-----IINLPVFQKVISFGGNTSG 263 F+AS++L GD+ IS+ H +G ++ARYP IG N + L +F+ ++ + Sbjct: 219 FLASVSLGGDSAISLHHSNGVLMARYPHAEDSIGLNLRSDEVARLGLFESNVTMPVTSP- 277 Query: 264 RFVGASGEENVGAVRSLSHFPILILATTKTSSALEDWRTQTKLQFCAAVLAVLIISFAVF 323 G E + + SL+ PI+++ T T AL WR QT+L AA ++ L++S + Sbjct: 278 ----VDGRERLVSSYSLASLPIVVVTATTTDEALAAWRKQTRLLISAATVSALVVSVILL 333 Query: 324 LIVRQLQRQHDAASRRLSEKSQHLDTAINTMTQGLLLFDASARLVICNQQYIDMFGLSPD 383 LI+RQL +QH A RL+ Q L+TAIN M+QGLLLFDA+ RLV+CNQ+YI M+GLSP+ Sbjct: 334 LIIRQLGKQHQATQARLALDKQRLNTAINNMSQGLLLFDAAQRLVVCNQRYIQMYGLSPE 393 Query: 384 VARPGCHLRDLILHRQAIGSFVGDVDEYCARFTNPRGDEVRDSVIMTPDGRSIRLIYKRA 443 + +PGC RD+I HR A GSF GDVDEYC R E + S + RSI++ Sbjct: 394 IVKPGCSFRDIIAHRHARGSFKGDVDEYCGRIVQAVIVE-KTSAVHGSHDRSIQISSVPV 452 Query: 444 PDGGWATTLEDVTDGRRAQARIEYLAHYDALTNLPNRTLFQRHAEGLLLEA-ATREFAIH 502 P GGW T ED+T+ R +I YLAHYD+LT+LPNR+LF++ E L + + Sbjct: 453 PGGGWVATHEDITERIRDSEKIAYLAHYDSLTDLPNRSLFRQRLERELHPGRGSAACTLL 512 Query: 503 YIDIDEFKRINDTLGHLIGDEFLRRVAEKLRQSVGSNDFIARLGGDEFAIVQHDITSDDD 562 YIDIDEFK INDTLGH IGDE L++VA +LR+ VG++DF+ARLGGDEFA++ D Sbjct: 513 YIDIDEFKSINDTLGHPIGDELLKQVAVRLRECVGASDFVARLGGDEFAVIATSAADSDQ 572 Query: 563 VGDLVARIYQSLRTPFDCLGHHLSSDASIGIAIAPRHGSDLFRLLKCADLAMYAAKAAGR 622 L RI Q++R P+ CLGHHLS+DASIGIAIAP G D+ +L+K ADLAMY+AKA GR Sbjct: 573 ATALAERILQTIRAPYHCLGHHLSTDASIGIAIAPGDGEDIDQLIKNADLAMYSAKAGGR 632 Query: 623 RTHRFFDPAMEAQANLRRALEADLRTALAEGGFELHYQPLVDLRSDEVTGCEALLRWRHP 682 RT RFF+PAM+A A RR LE DLRTA+A+GGFE+HYQP+VDLRSDE+TGCEALLRWRHP Sbjct: 633 RTFRFFEPAMDAIARARRELEFDLRTAIADGGFEIHYQPIVDLRSDEITGCEALLRWRHP 692 Query: 683 MRGMISPAEFIPVAEETGLIEEIGQWVLHTACTEAAAWPAHVRVAVNVSPIQFKSETLAL 742 RGMISPAEFIPVAE+TGLI EIG W L AC EA W ++ +AVN+SP+QF+ TLAL Sbjct: 693 TRGMISPAEFIPVAEDTGLINEIGGWTLAAACAEAVQWEQNITLAVNISPVQFRQPTLAL 752 Query: 743 KVAHALAESGLDPRRLELEITEAVLIADDDAALVTLGQLRALGVHIALDDFGTGYSSLQY 802 VA L +GL +RLELE+TEAVLI DDDAAL TL LRALGV I+LDDFGTGYSSL Y Sbjct: 753 LVASVLGSTGLPAQRLELEVTEAVLIHDDDAALTTLNLLRALGVRISLDDFGTGYSSLSY 812 Query: 803 LQRFPFDKIKIDRSFVKEVTRNSGSASIIRAVVSIAADRNMITTAEGVETDQQRDTVQML 862 LQRFPFDKIKIDR+FV+ + GS +II AVV+IAA R+M TTAEGVET +QRD ++ L Sbjct: 813 LQRFPFDKIKIDRAFVENIDTTEGSTAIIEAVVNIAASRSMTTTAEGVETVRQRDILRGL 872 Query: 863 GCTQMQGYLFSRPVPARDLRTLLA 886 GCTQMQG+LFS VPA R LLA Sbjct: 873 GCTQMQGWLFSPAVPAAKFRMLLA 896