BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0245.0018.p         (143 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001204720.1| hypothetical protein BRADO2667 [Bradyrhizobi...   179   2e-43
ref|YP_001239036.1| hypothetical protein BBta_3008 [Bradyrhizobi...   174   3e-42
ref|NP_769679.1| hypothetical protein blr3039 [Bradyrhizobium ja...   144   4e-33
ref|YP_569047.1| hypothetical protein RPD_1911 [Rhodopseudomonas...   141   3e-32
ref|YP_487160.1| hypothetical protein RPB_3554 [Rhodopseudomonas...   140   9e-32

>ref|YP_001204720.1| hypothetical protein BRADO2667 [Bradyrhizobium sp. ORS 278]
 emb|CAL76483.1| conserved hypothetical protein; putative membrane protein
           [Bradyrhizobium sp. ORS 278]
          Length = 214

 Score =  179 bits (453), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 87/137 (63%), Positives = 106/137 (77%)

Query: 1   MDTDQLIRTLAADNAYRARPVGLALMLALLAAAPVSLLIFFAELGVRPDVMSAMRNPFFD 60
           MDTDQLIR+LAADNA RA+PVG+ L LAL+AA PVS  +    LG+RPD+  A+RNPFFD
Sbjct: 3   MDTDQLIRSLAADNAQRAQPVGIVLALALMAATPVSTAMLLVGLGIRPDIWLAVRNPFFD 62

Query: 61  LKFAVTLALAASAIAVSLHLSRPEASLRGFGWWLLIPAGILVAAISGEMMMPQRTPMMTR 120
           LKF VT ALA  A+ +SLHLSRPEASL G+ W L+ P  +LV  I+ EMM+PQR PMM R
Sbjct: 63  LKFVVTAALAIPALIISLHLSRPEASLHGWSWLLIAPVLVLVGGIAAEMMLPQRAPMMAR 122

Query: 121 LIGKNSMACMTAIPAMS 137
           ++G NSM CM+AIP +S
Sbjct: 123 MVGHNSMLCMSAIPVLS 139


>ref|YP_001239036.1| hypothetical protein BBta_3008 [Bradyrhizobium sp. BTAi1]
 gb|ABQ35130.1| putative membrane protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 212

 Score =  174 bits (442), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 86/134 (64%), Positives = 103/134 (76%)

Query: 1   MDTDQLIRTLAADNAYRARPVGLALMLALLAAAPVSLLIFFAELGVRPDVMSAMRNPFFD 60
           MDTDQLIR+LAADNA RA+PVG+ L LAL+AA PVS  +    LG+RPD+  A+RNPFFD
Sbjct: 1   MDTDQLIRSLAADNAQRAQPVGIVLALALMAATPVSTAMLLIGLGIRPDIWLAVRNPFFD 60

Query: 61  LKFAVTLALAASAIAVSLHLSRPEASLRGFGWWLLIPAGILVAAISGEMMMPQRTPMMTR 120
           LKF VT ALA  A+ +SLHLSRPEASL G+ W L+ P  +LV  I  EMM+PQR PMM R
Sbjct: 61  LKFVVTTALAIPALIISLHLSRPEASLHGWSWLLIAPVLVLVGGIVAEMMVPQRAPMMAR 120

Query: 121 LIGKNSMACMTAIP 134
           L+G NSM C++AIP
Sbjct: 121 LVGHNSMLCVSAIP 134


>ref|NP_769679.1| hypothetical protein blr3039 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC48304.1| blr3039 [Bradyrhizobium japonicum USDA 110]
          Length = 212

 Score =  144 bits (363), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/137 (69%), Positives = 107/137 (78%)

Query: 1   MDTDQLIRTLAADNAYRARPVGLALMLALLAAAPVSLLIFFAELGVRPDVMSAMRNPFFD 60
           MDTDQLIR+LAADNA+R   VG  L +ALL AAP+S+LIF   LGVRPDVMSAM NPFFD
Sbjct: 1   MDTDQLIRSLAADNAHRTPRVGAVLTMALLVAAPLSILIFATFLGVRPDVMSAMHNPFFD 60

Query: 61  LKFAVTLALAASAIAVSLHLSRPEASLRGFGWWLLIPAGILVAAISGEMMMPQRTPMMTR 120
           +KFAVTL+LA  AI VSLHLSRPEA LRG+GW LL+P G+L  AI GE MM    PM  R
Sbjct: 61  MKFAVTLSLAIPAIIVSLHLSRPEALLRGWGWLLLLPVGLLAVAIGGETMMAPAMPMSMR 120

Query: 121 LIGKNSMACMTAIPAMS 137
           L+GKNS  C+ AIPAMS
Sbjct: 121 LMGKNSRVCLLAIPAMS 137


>ref|YP_569047.1| hypothetical protein RPD_1911 [Rhodopseudomonas palustris BisB5]
 gb|ABE39146.1| protein of unknown function DUF1109 [Rhodopseudomonas palustris
           BisB5]
          Length = 212

 Score =  141 bits (356), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/137 (61%), Positives = 99/137 (72%)

Query: 1   MDTDQLIRTLAADNAYRARPVGLALMLALLAAAPVSLLIFFAELGVRPDVMSAMRNPFFD 60
           MDTDQ I TLA D   R RPVG AL  +LL A PVS  +  + LG+RPD+ +A+ NPFFD
Sbjct: 1   MDTDQFINTLAVDVGQRERPVGQALAASLLVALPVSAAMLLSTLGLRPDIANAVANPFFD 60

Query: 61  LKFAVTLALAASAIAVSLHLSRPEASLRGFGWWLLIPAGILVAAISGEMMMPQRTPMMTR 120
           LKF VTLALA SAI V+LHLSRPEA+ RG+   LL P  IL  AI GE M+PQR+ MMTR
Sbjct: 61  LKFVVTLALALSAIIVALHLSRPEATARGWRLLLLAPLAILGLAIGGEAMLPQRSSMMTR 120

Query: 121 LIGKNSMACMTAIPAMS 137
           L+G NSM C+ AIP +S
Sbjct: 121 LVGHNSMLCLGAIPVLS 137


>ref|YP_487160.1| hypothetical protein RPB_3554 [Rhodopseudomonas palustris HaA2]
 gb|ABD08249.1| Protein of unknown function DUF1109 [Rhodopseudomonas palustris
           HaA2]
          Length = 212

 Score =  140 bits (352), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 82/137 (59%), Positives = 97/137 (70%)

Query: 1   MDTDQLIRTLAADNAYRARPVGLALMLALLAAAPVSLLIFFAELGVRPDVMSAMRNPFFD 60
           MDTD  I+TLAAD   R RPVG  L  ALL A PVS  +  + LG+RPD+ +A+ NPFFD
Sbjct: 1   MDTDHFIKTLAADVPQRGRPVGQVLAAALLVALPVSAAMLLSTLGLRPDIATAIGNPFFD 60

Query: 61  LKFAVTLALAASAIAVSLHLSRPEASLRGFGWWLLIPAGILVAAISGEMMMPQRTPMMTR 120
           LKF VTLAL  SAI V+LHLSRPEA+ R +   LL P  IL  AI GE M+P RT MMTR
Sbjct: 61  LKFVVTLALVLSAITVALHLSRPEATARRWNLLLLAPLAILGLAIGGEAMLPHRTSMMTR 120

Query: 121 LIGKNSMACMTAIPAMS 137
           L+G N+M C+TAIP +S
Sbjct: 121 LVGHNAMQCLTAIPVVS 137