BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0245.0003.p (718 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769694.1| methylmalonyl-CoA mutase [Bradyrhizobium japoni... 1379 0.0 ref|YP_531638.1| methylmalonyl-CoA mutase [Rhodopseudomonas palu... 1360 0.0 ref|ZP_08629239.1| methylmalonyl-CoA mutase [Bradyrhizobiaceae b... 1345 0.0 ref|YP_001991037.1| methylmalonyl-CoA mutase [Rhodopseudomonas p... 1341 0.0 ref|YP_001204732.1| methylmalonyl-CoA mutase [Bradyrhizobium sp.... 1340 0.0 >ref|NP_769694.1| methylmalonyl-CoA mutase [Bradyrhizobium japonicum USDA 110] dbj|BAC48319.1| methylmalonyl-CoA mutase [Bradyrhizobium japonicum USDA 110] Length = 718 Score = 1379 bits (3570), Expect = 0.0, Method: Compositional matrix adjust. Identities = 669/718 (93%), Positives = 691/718 (96%) Query: 1 MTRIPDFADVAFQPVATTAPAASAEPWLTPEGIPVKSVYGEADLEGIDFLETWPGIAPYL 60 M+RIP+FADVAF+ T APA SAEPWLTPEGI VK YGEADL G+DFLET+PGIAPYL Sbjct: 1 MSRIPNFADVAFERATTAAPAGSAEPWLTPEGILVKPAYGEADLAGLDFLETYPGIAPYL 60 Query: 61 RGPYPTMYVNQPWTIRQYAGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPR 120 RGPYPTMYVNQPWT+RQYAGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPR Sbjct: 61 RGPYPTMYVNQPWTVRQYAGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPR 120 Query: 121 VSGDVGMAGVAIDSIYDMRTLFAGIPLDQMSVSMTMNGAVLPILALFVAAAEEQGVPPEK 180 V GDVGMAGVAIDSIYDMRTLFAGIPLDQMSVSMTMNGAVLPILALFVAAA EQGVPPEK Sbjct: 121 VGGDVGMAGVAIDSIYDMRTLFAGIPLDQMSVSMTMNGAVLPILALFVAAAGEQGVPPEK 180 Query: 181 LSGTIQNDILKEFMVRNTYIYPPAPSMRIISDIFAYTSQRMPKYNSISISGYHMQEAGAT 240 LSGTIQNDILKEFMVRNTYIYPPAPSMRIISDIFAYTS +MPKYNSISISGYHMQEAGAT Sbjct: 181 LSGTIQNDILKEFMVRNTYIYPPAPSMRIISDIFAYTSTKMPKYNSISISGYHMQEAGAT 240 Query: 241 QDLELAYTLADGVEYLRAGLAAGLDVDRFAPRLSFFWAIGMNFFMEVAKMRAARLLWAKL 300 QDLELAYTLADGVEYLRAGLAAGLDVDRFAPRLSFFWAIGMNFFMEVAKMRAARLLWAKL Sbjct: 241 QDLELAYTLADGVEYLRAGLAAGLDVDRFAPRLSFFWAIGMNFFMEVAKMRAARLLWAKL 300 Query: 301 LKQFNPKDPRSLSLRTHCQTSGWSLTAQDVFNNVMRTTIEAMAATQGHTQSLHTNALDEA 360 LK FNPKDPRSLSLRTHCQTSGWSLTAQDVFNNVMRTT+EAMAATQGHTQSLHTNALDEA Sbjct: 301 LKPFNPKDPRSLSLRTHCQTSGWSLTAQDVFNNVMRTTVEAMAATQGHTQSLHTNALDEA 360 Query: 361 LALPTDFSARIARNTQLFLQQESGTNRIIDPWGGSYYVERLTRDLAQKAWGHIQEVEALG 420 LALPTDFSARIARNTQLFLQQESGT RIIDPWGGSYYVERLTRDLA KAW HIQEVE LG Sbjct: 361 LALPTDFSARIARNTQLFLQQESGTTRIIDPWGGSYYVERLTRDLAAKAWSHIQEVEELG 420 Query: 421 GMAKAIEAGVPKLRIEEASAKTQARIDAGRQAVIGVNKFKPENEKAIDVLKVENSTVRRL 480 GMAKAIEAGVPKLRIEEASAKTQARIDAG+QAVIGVNK+KP +E ID+LKV+N+ VRRL Sbjct: 421 GMAKAIEAGVPKLRIEEASAKTQARIDAGKQAVIGVNKYKPTDEAPIDILKVDNTNVRRL 480 Query: 481 QIDKLARLKKERNQKDVDAALAALTRSAGEGNGNLLALAIDAARAKATVGEISDAMEKVF 540 QIDKL RLK ERNQKDVDAALAALTRSAGEGNGNLLALAIDAARAKATVGEISDAMEKVF Sbjct: 481 QIDKLTRLKSERNQKDVDAALAALTRSAGEGNGNLLALAIDAARAKATVGEISDAMEKVF 540 Query: 541 GRHRAEIKSITGVYKREAAAMSNKVEKVQALIDAFEEAEGRRPRILVAKIGQDGHDRGQK 600 GRHRAEIKSITGVYKREA++M N+VEKVQALIDAFEEAEGRRPRILVAKIGQDGHDRGQK Sbjct: 541 GRHRAEIKSITGVYKREASSMGNRVEKVQALIDAFEEAEGRRPRILVAKIGQDGHDRGQK 600 Query: 601 VIASAFADVGFDVDIGPLFATADEAARQAVENDVHILGVSSLAAAHLTAVPELKAALKKH 660 VIASAFAD+GFDVDIGPLFATADEAARQAVENDVHILGVSSLAAAHLTAVPELKAALKK Sbjct: 601 VIASAFADIGFDVDIGPLFATADEAARQAVENDVHILGVSSLAAAHLTAVPELKAALKKQ 660 Query: 661 GREDIMIIIGGVVPPQDYDALYAAGAEAIFPPGTVISDAAEELIHKLNARLGHSAAAE 718 GR+DIMII+GGVVPPQDY+ALYAAGAEAIFPPGTVI+DAAEELI KLNARLGHS AAE Sbjct: 661 GRDDIMIIVGGVVPPQDYEALYAAGAEAIFPPGTVIADAAEELIRKLNARLGHSEAAE 718 >ref|YP_531638.1| methylmalonyl-CoA mutase [Rhodopseudomonas palustris BisB18] gb|ABD87319.1| methylmalonyl-CoA mutase [Rhodopseudomonas palustris BisB18] Length = 718 Score = 1360 bits (3521), Expect = 0.0, Method: Compositional matrix adjust. Identities = 658/718 (91%), Positives = 690/718 (96%) Query: 1 MTRIPDFADVAFQPVATTAPAASAEPWLTPEGIPVKSVYGEADLEGIDFLETWPGIAPYL 60 M++IP+FADVAFQ A AEPWLTPEGI VK Y EADL+GIDFL+T+PGIAP+L Sbjct: 1 MSQIPNFADVAFQSAAVAPAGGHAEPWLTPEGILVKPGYSEADLKGIDFLDTYPGIAPFL 60 Query: 61 RGPYPTMYVNQPWTIRQYAGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPR 120 RGPYPTMYVNQPWTIRQYAGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPR Sbjct: 61 RGPYPTMYVNQPWTIRQYAGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPR 120 Query: 121 VSGDVGMAGVAIDSIYDMRTLFAGIPLDQMSVSMTMNGAVLPILALFVAAAEEQGVPPEK 180 VSGDVGMAGVAIDSIYDMRTLFAGIPLDQMSVSMTMNGAVLPILALFVAAAEEQGVPPEK Sbjct: 121 VSGDVGMAGVAIDSIYDMRTLFAGIPLDQMSVSMTMNGAVLPILALFVAAAEEQGVPPEK 180 Query: 181 LSGTIQNDILKEFMVRNTYIYPPAPSMRIISDIFAYTSQRMPKYNSISISGYHMQEAGAT 240 LSGTIQNDILKEFMVRNTYIYPPAPSMRIISDIFAYTS +MPKYNSISISGYHMQEAGAT Sbjct: 181 LSGTIQNDILKEFMVRNTYIYPPAPSMRIISDIFAYTSAKMPKYNSISISGYHMQEAGAT 240 Query: 241 QDLELAYTLADGVEYLRAGLAAGLDVDRFAPRLSFFWAIGMNFFMEVAKMRAARLLWAKL 300 QDLELAYTLADGVEYLRAG+AAGLDVDRFAPRLSFFWAIGMNFFMEVAKMRAARLLWAKL Sbjct: 241 QDLELAYTLADGVEYLRAGIAAGLDVDRFAPRLSFFWAIGMNFFMEVAKMRAARLLWAKL 300 Query: 301 LKQFNPKDPRSLSLRTHCQTSGWSLTAQDVFNNVMRTTIEAMAATQGHTQSLHTNALDEA 360 LKQFNP++P+SLSLRTHCQTSGWSLTAQDV+NNVMRTTIEAMAATQGHTQSLHTNALDEA Sbjct: 301 LKQFNPQNPKSLSLRTHCQTSGWSLTAQDVYNNVMRTTIEAMAATQGHTQSLHTNALDEA 360 Query: 361 LALPTDFSARIARNTQLFLQQESGTNRIIDPWGGSYYVERLTRDLAQKAWGHIQEVEALG 420 LALPTDFSARIARNTQLFLQQESGTNRIIDPWGGSYYVERLTRDLA KAWGHIQEVE+LG Sbjct: 361 LALPTDFSARIARNTQLFLQQESGTNRIIDPWGGSYYVERLTRDLAAKAWGHIQEVESLG 420 Query: 421 GMAKAIEAGVPKLRIEEASAKTQARIDAGRQAVIGVNKFKPENEKAIDVLKVENSTVRRL 480 GMAKAIEAGVPKLRIEEASAKTQARIDAGRQAVIGVNK+KP +E AIDVLKV+NSTVRRL Sbjct: 421 GMAKAIEAGVPKLRIEEASAKTQARIDAGRQAVIGVNKYKPVDEAAIDVLKVDNSTVRRL 480 Query: 481 QIDKLARLKKERNQKDVDAALAALTRSAGEGNGNLLALAIDAARAKATVGEISDAMEKVF 540 QIDKL RL+ ERNQ DVDAAL ALTRSA EGNGNLLALAIDAAR KATVGEISDA+EKVF Sbjct: 481 QIDKLKRLRGERNQADVDAALNALTRSASEGNGNLLALAIDAARVKATVGEISDALEKVF 540 Query: 541 GRHRAEIKSITGVYKREAAAMSNKVEKVQALIDAFEEAEGRRPRILVAKIGQDGHDRGQK 600 GRHRAEI+SITGVYKREAA MSN+VEK++ALIDAFE+AEGRRPRILVAKIGQDGHDRGQK Sbjct: 541 GRHRAEIRSITGVYKREAATMSNRVEKLKALIDAFEDAEGRRPRILVAKIGQDGHDRGQK 600 Query: 601 VIASAFADVGFDVDIGPLFATADEAARQAVENDVHILGVSSLAAAHLTAVPELKAALKKH 660 VIASAFAD+GFDVDIGPLFATA+EAA+QAVENDVHILGVSSLAAAHLTAVPELKAALKK Sbjct: 601 VIASAFADIGFDVDIGPLFATAEEAAKQAVENDVHILGVSSLAAAHLTAVPELKAALKKQ 660 Query: 661 GREDIMIIIGGVVPPQDYDALYAAGAEAIFPPGTVISDAAEELIHKLNARLGHSAAAE 718 GR+DIM+IIGGV+PPQDYD LY AGAEAIFPPGTVI+DAAEELIHKLNARLGH+ AAE Sbjct: 661 GRDDIMVIIGGVMPPQDYDTLYKAGAEAIFPPGTVIADAAEELIHKLNARLGHAEAAE 718 >ref|ZP_08629239.1| methylmalonyl-CoA mutase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07732.1| methylmalonyl-CoA mutase [Bradyrhizobiaceae bacterium SG-6C] Length = 719 Score = 1345 bits (3481), Expect = 0.0, Method: Compositional matrix adjust. Identities = 645/717 (89%), Positives = 685/717 (95%) Query: 1 MTRIPDFADVAFQPVATTAPAASAEPWLTPEGIPVKSVYGEADLEGIDFLETWPGIAPYL 60 MTRIP+FADVAF+P A A +SA+PWLTPEG+ VK Y EADL GIDFL+TWPGIAP+L Sbjct: 1 MTRIPNFADVAFEPAAVKASESSAQPWLTPEGLLVKPSYSEADLNGIDFLDTWPGIAPFL 60 Query: 61 RGPYPTMYVNQPWTIRQYAGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPR 120 RGPYPTMYVNQPWT+RQYAGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPR Sbjct: 61 RGPYPTMYVNQPWTVRQYAGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPR 120 Query: 121 VSGDVGMAGVAIDSIYDMRTLFAGIPLDQMSVSMTMNGAVLPILALFVAAAEEQGVPPEK 180 VSGDVGMAGVAIDSIYDMRTLFAGIPLDQMSVSMTMNGAVLPILALFV AAEEQGVPPEK Sbjct: 121 VSGDVGMAGVAIDSIYDMRTLFAGIPLDQMSVSMTMNGAVLPILALFVVAAEEQGVPPEK 180 Query: 181 LSGTIQNDILKEFMVRNTYIYPPAPSMRIISDIFAYTSQRMPKYNSISISGYHMQEAGAT 240 LSGTIQNDILKEFMVRNTYIYPP PSMRIISDIFAYTSQ+MPK+NSISISGYHMQEAGAT Sbjct: 181 LSGTIQNDILKEFMVRNTYIYPPTPSMRIISDIFAYTSQKMPKFNSISISGYHMQEAGAT 240 Query: 241 QDLELAYTLADGVEYLRAGLAAGLDVDRFAPRLSFFWAIGMNFFMEVAKMRAARLLWAKL 300 QDLELAYTLADGVEY+RAG+AAGLD+D+FAPRLSFFWAIGMNFFMEVAKMRAARLLWAKL Sbjct: 241 QDLELAYTLADGVEYVRAGMAAGLDIDKFAPRLSFFWAIGMNFFMEVAKMRAARLLWAKL 300 Query: 301 LKQFNPKDPRSLSLRTHCQTSGWSLTAQDVFNNVMRTTIEAMAATQGHTQSLHTNALDEA 360 +K FNPKD RSLSLRTH QTSGWSLTAQDVFNNV+RT +EAMAATQGHTQSLHTNALDEA Sbjct: 301 MKPFNPKDARSLSLRTHSQTSGWSLTAQDVFNNVVRTNVEAMAATQGHTQSLHTNALDEA 360 Query: 361 LALPTDFSARIARNTQLFLQQESGTNRIIDPWGGSYYVERLTRDLAQKAWGHIQEVEALG 420 LALPTDFSARIARNTQLFLQQESGT RI+DPWGGS+YVERLT DLA KAW HI+EVE LG Sbjct: 361 LALPTDFSARIARNTQLFLQQESGTTRIVDPWGGSFYVERLTHDLAAKAWAHIEEVEELG 420 Query: 421 GMAKAIEAGVPKLRIEEASAKTQARIDAGRQAVIGVNKFKPENEKAIDVLKVENSTVRRL 480 GMAKAIEAGVPKLRIEEASAKTQARIDAG+Q+VIGVNK++PENE AIDVLKVENSTVRRL Sbjct: 421 GMAKAIEAGVPKLRIEEASAKTQARIDAGKQSVIGVNKYRPENEAAIDVLKVENSTVRRL 480 Query: 481 QIDKLARLKKERNQKDVDAALAALTRSAGEGNGNLLALAIDAARAKATVGEISDAMEKVF 540 QIDKL+RL+ ER Q +VDAALAALTRSA EGNGNLLALAIDAARAKATVGEISDAMEKVF Sbjct: 481 QIDKLSRLRSERKQAEVDAALAALTRSANEGNGNLLALAIDAARAKATVGEISDAMEKVF 540 Query: 541 GRHRAEIKSITGVYKREAAAMSNKVEKVQALIDAFEEAEGRRPRILVAKIGQDGHDRGQK 600 GRHRAEIKSITGVYKREAA MS++VEK+ ALIDAFE+AEGRRPRILVAKIGQDGHDRGQK Sbjct: 541 GRHRAEIKSITGVYKREAATMSDRVEKLAALIDAFEDAEGRRPRILVAKIGQDGHDRGQK 600 Query: 601 VIASAFADVGFDVDIGPLFATADEAARQAVENDVHILGVSSLAAAHLTAVPELKAALKKH 660 VIASAFADVGFDVDIGPLFATADEAARQAVENDVH+LG+SSLAAAHLTAVPELK ALKK Sbjct: 601 VIASAFADVGFDVDIGPLFATADEAARQAVENDVHMLGLSSLAAAHLTAVPELKEALKKR 660 Query: 661 GREDIMIIIGGVVPPQDYDALYAAGAEAIFPPGTVISDAAEELIHKLNARLGHSAAA 717 GREDIMII+GGV+PPQDYDALY +GAEAIFPPGTVI+DAAEELI+KLN RLGH++AA Sbjct: 661 GREDIMIIVGGVIPPQDYDALYKSGAEAIFPPGTVIADAAEELINKLNVRLGHASAA 717 >ref|YP_001991037.1| methylmalonyl-CoA mutase [Rhodopseudomonas palustris TIE-1] gb|ACF00562.1| methylmalonyl-CoA mutase, large subunit [Rhodopseudomonas palustris TIE-1] Length = 719 Score = 1341 bits (3471), Expect = 0.0, Method: Compositional matrix adjust. Identities = 645/717 (89%), Positives = 683/717 (95%) Query: 1 MTRIPDFADVAFQPVATTAPAASAEPWLTPEGIPVKSVYGEADLEGIDFLETWPGIAPYL 60 M++IP+FA++AFQP A APA A+PWLTPEGI VK Y EAD+ GIDFL+TWPG+AP+L Sbjct: 1 MSKIPNFAEIAFQPTAAPAPAGEAQPWLTPEGILVKPGYSEADVAGIDFLDTWPGVAPFL 60 Query: 61 RGPYPTMYVNQPWTIRQYAGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPR 120 RGPYPTMYVNQPWTIRQYAGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPR Sbjct: 61 RGPYPTMYVNQPWTIRQYAGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPR 120 Query: 121 VSGDVGMAGVAIDSIYDMRTLFAGIPLDQMSVSMTMNGAVLPILALFVAAAEEQGVPPEK 180 V+GDVGMAGVAIDSIYDMRTLFAGIPLDQMSVSMTMNGAVLPILAL+VAAAEEQGV PEK Sbjct: 121 VAGDVGMAGVAIDSIYDMRTLFAGIPLDQMSVSMTMNGAVLPILALYVAAAEEQGVSPEK 180 Query: 181 LSGTIQNDILKEFMVRNTYIYPPAPSMRIISDIFAYTSQRMPKYNSISISGYHMQEAGAT 240 LSGTIQNDILKEFMVRNTYIYPP PSMRIISDIFAYTSQ+MPK+NSISISGYHMQEAGAT Sbjct: 181 LSGTIQNDILKEFMVRNTYIYPPVPSMRIISDIFAYTSQKMPKFNSISISGYHMQEAGAT 240 Query: 241 QDLELAYTLADGVEYLRAGLAAGLDVDRFAPRLSFFWAIGMNFFMEVAKMRAARLLWAKL 300 QDLELAYTLADGVEY+RAG+AAGLDVD+FAPRLSFFWAIGMNFFMEVAKMRAARLLWAKL Sbjct: 241 QDLELAYTLADGVEYVRAGIAAGLDVDKFAPRLSFFWAIGMNFFMEVAKMRAARLLWAKL 300 Query: 301 LKQFNPKDPRSLSLRTHCQTSGWSLTAQDVFNNVMRTTIEAMAATQGHTQSLHTNALDEA 360 L QF+PK +SLSLRTHCQTSGWSLTAQDVFNNV RTTIEAMAATQGHTQSLHTNALDEA Sbjct: 301 LTQFDPKQQKSLSLRTHCQTSGWSLTAQDVFNNVSRTTIEAMAATQGHTQSLHTNALDEA 360 Query: 361 LALPTDFSARIARNTQLFLQQESGTNRIIDPWGGSYYVERLTRDLAQKAWGHIQEVEALG 420 LALPTDFSARIARNTQLFLQQESGT RIIDPWGGSYYVERLT D+A KAW HIQEVEALG Sbjct: 361 LALPTDFSARIARNTQLFLQQESGTTRIIDPWGGSYYVERLTHDIAVKAWAHIQEVEALG 420 Query: 421 GMAKAIEAGVPKLRIEEASAKTQARIDAGRQAVIGVNKFKPENEKAIDVLKVENSTVRRL 480 GMAKAIEAGVPKLRIEEA+AKTQARID GRQ+VIGVNK+KP +E IDVLKV+NSTVRRL Sbjct: 421 GMAKAIEAGVPKLRIEEAAAKTQARIDTGRQSVIGVNKYKPTDETPIDVLKVDNSTVRRL 480 Query: 481 QIDKLARLKKERNQKDVDAALAALTRSAGEGNGNLLALAIDAARAKATVGEISDAMEKVF 540 QIDKL RLKKER Q DVDAAL ALTRSA EGNGNLLALAIDAAR KATVGEISDA+EKV+ Sbjct: 481 QIDKLGRLKKERVQADVDAALLALTRSASEGNGNLLALAIDAARKKATVGEISDALEKVY 540 Query: 541 GRHRAEIKSITGVYKREAAAMSNKVEKVQALIDAFEEAEGRRPRILVAKIGQDGHDRGQK 600 GRHRAEIKSITGVYKRE A+M++++EKVQALIDAFE+AEGRRPRILVAKIGQDGHDRGQK Sbjct: 541 GRHRAEIKSITGVYKREVASMADRMEKVQALIDAFEDAEGRRPRILVAKIGQDGHDRGQK 600 Query: 601 VIASAFADVGFDVDIGPLFATADEAARQAVENDVHILGVSSLAAAHLTAVPELKAALKKH 660 VIASAFAD+GFDVDIGPLFATA+EAARQAVENDVHILGVSSLAAAHLTAVPELKAALKK Sbjct: 601 VIASAFADIGFDVDIGPLFATAEEAARQAVENDVHILGVSSLAAAHLTAVPELKAALKKQ 660 Query: 661 GREDIMIIIGGVVPPQDYDALYAAGAEAIFPPGTVISDAAEELIHKLNARLGHSAAA 717 GREDIMIIIGGVVPPQDYDALY +GAEAIFPPGTVI+DAAEELIHKLNARLGHS+ A Sbjct: 661 GREDIMIIIGGVVPPQDYDALYKSGAEAIFPPGTVIADAAEELIHKLNARLGHSSQA 717 >ref|YP_001204732.1| methylmalonyl-CoA mutase [Bradyrhizobium sp. ORS 278] emb|CAL76495.1| Methylmalonyl-CoA mutase large subunit (MCM-alpha) [Bradyrhizobium sp. ORS 278] Length = 718 Score = 1340 bits (3467), Expect = 0.0, Method: Compositional matrix adjust. Identities = 658/718 (91%), Positives = 688/718 (95%) Query: 1 MTRIPDFADVAFQPVATTAPAASAEPWLTPEGIPVKSVYGEADLEGIDFLETWPGIAPYL 60 MTRIP+FAD+AF+P A APA +AEPWLTPEGIPVK YGEADL GIDFLETWPG APYL Sbjct: 1 MTRIPNFADIAFEPTAAPAPAGAAEPWLTPEGIPVKPAYGEADLAGIDFLETWPGTAPYL 60 Query: 61 RGPYPTMYVNQPWTIRQYAGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPR 120 RGPYPTMYVNQPWT+RQYAGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPR Sbjct: 61 RGPYPTMYVNQPWTVRQYAGFSTAEDSNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPR 120 Query: 121 VSGDVGMAGVAIDSIYDMRTLFAGIPLDQMSVSMTMNGAVLPILALFVAAAEEQGVPPEK 180 V GDVGMAGVAIDSIYDMRTLFAGIPLDQMSVSMTMNGAVLPILALFV AAEEQGVPPEK Sbjct: 121 VGGDVGMAGVAIDSIYDMRTLFAGIPLDQMSVSMTMNGAVLPILALFVVAAEEQGVPPEK 180 Query: 181 LSGTIQNDILKEFMVRNTYIYPPAPSMRIISDIFAYTSQRMPKYNSISISGYHMQEAGAT 240 LSGTIQNDILKEFMVRNTYIYPPAPSMRIISDIFA+TSQRMPK+NSISISGYHMQEAGAT Sbjct: 181 LSGTIQNDILKEFMVRNTYIYPPAPSMRIISDIFAFTSQRMPKFNSISISGYHMQEAGAT 240 Query: 241 QDLELAYTLADGVEYLRAGLAAGLDVDRFAPRLSFFWAIGMNFFMEVAKMRAARLLWAKL 300 QDLELAYTLADGVEYLRAG+AAGLDVDRFAPRLSFFWAIGMNFFMEVAK+RAARLLWAKL Sbjct: 241 QDLELAYTLADGVEYLRAGIAAGLDVDRFAPRLSFFWAIGMNFFMEVAKLRAARLLWAKL 300 Query: 301 LKQFNPKDPRSLSLRTHCQTSGWSLTAQDVFNNVMRTTIEAMAATQGHTQSLHTNALDEA 360 LK FNPKDPRSLSLRTH QTSGWSLTAQDV+NNV+RT +EAMAATQGHTQSLHTNALDEA Sbjct: 301 LKPFNPKDPRSLSLRTHSQTSGWSLTAQDVYNNVVRTAVEAMAATQGHTQSLHTNALDEA 360 Query: 361 LALPTDFSARIARNTQLFLQQESGTNRIIDPWGGSYYVERLTRDLAQKAWGHIQEVEALG 420 LALPTDFSARIARNTQLFLQQESGT RIIDPWGGSYYVERLTRDLA KAWGHIQE+E LG Sbjct: 361 LALPTDFSARIARNTQLFLQQESGTTRIIDPWGGSYYVERLTRDLAAKAWGHIQEIEELG 420 Query: 421 GMAKAIEAGVPKLRIEEASAKTQARIDAGRQAVIGVNKFKPENEKAIDVLKVENSTVRRL 480 GMAKAIEAGVPKLRIEEASAKTQARID GRQ+VIGVNK+KP +E +DVLKV+NSTVRRL Sbjct: 421 GMAKAIEAGVPKLRIEEASAKTQARIDTGRQSVIGVNKYKPTDEPPLDVLKVDNSTVRRL 480 Query: 481 QIDKLARLKKERNQKDVDAALAALTRSAGEGNGNLLALAIDAARAKATVGEISDAMEKVF 540 QIDKL+RLK ER Q +VDAALAALTRSAG+GNGNLLALAI+AARAKATVGEISDA+EKVF Sbjct: 481 QIDKLSRLKSERKQAEVDAALAALTRSAGDGNGNLLALAIEAARAKATVGEISDALEKVF 540 Query: 541 GRHRAEIKSITGVYKREAAAMSNKVEKVQALIDAFEEAEGRRPRILVAKIGQDGHDRGQK 600 GRHRAEIKSITGVYKRE AAMS K EK+Q LI++FEEAEGRRPRILVAKIGQDGHDRGQK Sbjct: 541 GRHRAEIKSITGVYKREIAAMSGKAEKLQTLIESFEEAEGRRPRILVAKIGQDGHDRGQK 600 Query: 601 VIASAFADVGFDVDIGPLFATADEAARQAVENDVHILGVSSLAAAHLTAVPELKAALKKH 660 VIASAFAD+GFDVDIGPLFATADEAARQAVENDVHILGVSSLAAAHLTAVPELKAALKK Sbjct: 601 VIASAFADIGFDVDIGPLFATADEAARQAVENDVHILGVSSLAAAHLTAVPELKAALKKQ 660 Query: 661 GREDIMIIIGGVVPPQDYDALYAAGAEAIFPPGTVISDAAEELIHKLNARLGHSAAAE 718 GREDIMII+GGVVPPQDYDALY +GAEAIFPPGTVI+DAAEELIHKLNARLGHS AAE Sbjct: 661 GREDIMIIVGGVVPPQDYDALYKSGAEAIFPPGTVIADAAEELIHKLNARLGHSEAAE 718