BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0244.0023.p (185 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001242871.1| branched chain amino acid ABC transporter pe... 315 2e-84 ref|ZP_08629126.1| hypothetical protein CSIRO_2213 [Bradyrhizobi... 270 5e-71 ref|YP_782698.1| extracellular ligand-binding receptor [Rhodopse... 261 3e-68 ref|NP_947143.1| putative branched chain amino acid ABC transpor... 257 5e-67 ref|YP_001990999.1| extracellular ligand-binding receptor [Rhodo... 257 5e-67 >ref|YP_001242871.1| branched chain amino acid ABC transporter periplasmic-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ38965.1| amino acid/amide ABC transporter substrate-binding protein, HAAT family [Bradyrhizobium sp. BTAi1] Length = 407 Score = 315 bits (807), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 145/182 (79%), Positives = 171/182 (93%) Query: 1 VRLKSSNPDVIVFFTTPKFGAQAIKKLGEMNWKPVTIVSNVSASTATVMRPAGLDNAQGV 60 V++KS+NPD++V FTTPK GAQAIKKLGEM+WKP+TI+SNVSASTA VMRPAG++N+QGV Sbjct: 225 VKMKSANPDIVVLFTTPKSGAQAIKKLGEMSWKPLTIISNVSASTAAVMRPAGVENSQGV 284 Query: 61 ISAAYAKDASDPQWKDDAGMKAFDELLAKYMPDTNRVDASAMTGYNMATTMVEVLRRCGD 120 ISAAYAKDASDPQW +D G+ AF +LLAKY+P+ N VD+SA+TGYN+ATTMVEVL+RCGD Sbjct: 285 ISAAYAKDASDPQWANDPGLGAFKDLLAKYLPEINPVDSSALTGYNIATTMVEVLKRCGD 344 Query: 121 DLTRANVMKQAASLKQFAQGGLLPGVTLSTGPAAFQPIEQLQLMQFKGERWQLFGDVISG 180 +LTRANVMKQAASLKQFAQGGLLPGVTL+TGP FQPIEQLQLMQFKGERWQLFG+V++G Sbjct: 345 ELTRANVMKQAASLKQFAQGGLLPGVTLTTGPDDFQPIEQLQLMQFKGERWQLFGEVMNG 404 Query: 181 EV 182 E+ Sbjct: 405 EL 406 >ref|ZP_08629126.1| hypothetical protein CSIRO_2213 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08485.1| hypothetical protein CSIRO_2213 [Bradyrhizobiaceae bacterium SG-6C] Length = 393 Score = 270 bits (691), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 126/181 (69%), Positives = 148/181 (81%) Query: 1 VRLKSSNPDVIVFFTTPKFGAQAIKKLGEMNWKPVTIVSNVSASTATVMRPAGLDNAQGV 60 V+LK+ NPDV++ FTTPKFGAQ IKK+GE+ WKP+ I+SNVSASTATVM+PAG DNAQGV Sbjct: 207 VKLKTLNPDVLLVFTTPKFGAQTIKKVGELAWKPMLIISNVSASTATVMKPAGFDNAQGV 266 Query: 61 ISAAYAKDASDPQWKDDAGMKAFDELLAKYMPDTNRVDASAMTGYNMATTMVEVLRRCGD 120 ISAAYAKD SDPQW DD GMK + LAKY+P+ N D+SA+TGYNMA TM VL++CGD Sbjct: 267 ISAAYAKDTSDPQWNDDPGMKEYKAFLAKYVPEANVADSSALTGYNMAQTMAAVLKQCGD 326 Query: 121 DLTRANVMKQAASLKQFAQGGLLPGVTLSTGPAAFQPIEQLQLMQFKGERWQLFGDVISG 180 +LTR NVMKQAAS+ QGGLLPGV + T F PIEQLQLM+FKGERW+LFG+V G Sbjct: 327 NLTRENVMKQAASIGGIQQGGLLPGVLIKTSATDFAPIEQLQLMRFKGERWELFGEVQDG 386 Query: 181 E 181 E Sbjct: 387 E 387 >ref|YP_782698.1| extracellular ligand-binding receptor [Rhodopseudomonas palustris BisA53] gb|ABJ07718.1| Extracellular ligand-binding receptor [Rhodopseudomonas palustris BisA53] Length = 410 Score = 261 bits (667), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 118/185 (63%), Positives = 149/185 (80%) Query: 1 VRLKSSNPDVIVFFTTPKFGAQAIKKLGEMNWKPVTIVSNVSASTATVMRPAGLDNAQGV 60 V++KS PDV+V F TPKF AQ IKK+ E+ WKP+TIV NVSAST +VM+PAG +NAQG+ Sbjct: 224 VKMKSLEPDVVVIFATPKFAAQTIKKIAELAWKPLTIVPNVSASTGSVMKPAGFENAQGI 283 Query: 61 ISAAYAKDASDPQWKDDAGMKAFDELLAKYMPDTNRVDASAMTGYNMATTMVEVLRRCGD 120 +SA+YAKDA+D QW +D GMKA+ + LAKY P+ +R D+S MTGYN+A TM +L++CGD Sbjct: 284 VSASYAKDATDKQWDNDPGMKAYHDFLAKYAPEISRADSSFMTGYNIAETMAILLKQCGD 343 Query: 121 DLTRANVMKQAASLKQFAQGGLLPGVTLSTGPAAFQPIEQLQLMQFKGERWQLFGDVISG 180 DL+R NVMKQAA+LK Q GLLPG+T+ST F PIEQLQLM+F+GE W+LFGDVI G Sbjct: 344 DLSRENVMKQAANLKGIPQSGLLPGITISTSATDFSPIEQLQLMRFEGENWKLFGDVIDG 403 Query: 181 EVGGN 185 EVG + Sbjct: 404 EVGAS 408 >ref|NP_947143.1| putative branched chain amino acid ABC transporter periplasmic binding protein [Rhodopseudomonas palustris CGA009] emb|CAE27239.1| putative periplasmic binding protein for ABC transporter for branched chain amino acids [Rhodopseudomonas palustris CGA009] Length = 411 Score = 257 bits (657), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 116/182 (63%), Positives = 149/182 (81%) Query: 1 VRLKSSNPDVIVFFTTPKFGAQAIKKLGEMNWKPVTIVSNVSASTATVMRPAGLDNAQGV 60 V++K++NPDV+V F TPKF AQ IKK+ E+ WKP+ IV NVSAST +VM+PAG +NAQG+ Sbjct: 224 VKIKAANPDVLVIFATPKFAAQTIKKVAELAWKPMMIVPNVSASTGSVMKPAGFENAQGI 283 Query: 61 ISAAYAKDASDPQWKDDAGMKAFDELLAKYMPDTNRVDASAMTGYNMATTMVEVLRRCGD 120 +SAAYAKDA+D QW++D GMKA+ E +AKY PD +R D+S TGYN+A T+ ++++CGD Sbjct: 284 VSAAYAKDATDKQWENDPGMKAYYEFMAKYAPDASRADSSFTTGYNIAETVAVLIKQCGD 343 Query: 121 DLTRANVMKQAASLKQFAQGGLLPGVTLSTGPAAFQPIEQLQLMQFKGERWQLFGDVISG 180 DL+R NVMKQAA+LK GGLLPGVTL+T P F PIEQLQ+M+F+GE W+LFGDVI G Sbjct: 344 DLSRENVMKQAANLKGVQLGGLLPGVTLNTSPTDFAPIEQLQMMRFEGENWKLFGDVIEG 403 Query: 181 EV 182 EV Sbjct: 404 EV 405 >ref|YP_001990999.1| extracellular ligand-binding receptor [Rhodopseudomonas palustris TIE-1] gb|ACF00524.1| Extracellular ligand-binding receptor [Rhodopseudomonas palustris TIE-1] Length = 411 Score = 257 bits (657), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 116/182 (63%), Positives = 149/182 (81%) Query: 1 VRLKSSNPDVIVFFTTPKFGAQAIKKLGEMNWKPVTIVSNVSASTATVMRPAGLDNAQGV 60 V++K++NPDV+V F TPKF AQ IKK+ E+ WKP+ IV NVSAST +VM+PAG +NAQG+ Sbjct: 224 VKIKAANPDVLVIFATPKFAAQTIKKVAELAWKPMMIVPNVSASTGSVMKPAGFENAQGI 283 Query: 61 ISAAYAKDASDPQWKDDAGMKAFDELLAKYMPDTNRVDASAMTGYNMATTMVEVLRRCGD 120 +SAAYAKDA+D QW++D GMKA+ E +AKY PD +R D+S TGYN+A T+ ++++CGD Sbjct: 284 VSAAYAKDATDKQWENDPGMKAYYEFMAKYAPDASRADSSFTTGYNIAETVAVLIKQCGD 343 Query: 121 DLTRANVMKQAASLKQFAQGGLLPGVTLSTGPAAFQPIEQLQLMQFKGERWQLFGDVISG 180 DL+R NVMKQAA+LK GGLLPGVTL+T P F PIEQLQ+M+F+GE W+LFGDVI G Sbjct: 344 DLSRENVMKQAANLKGVQLGGLLPGVTLNTSPTDFAPIEQLQMMRFEGENWKLFGDVIEG 403 Query: 181 EV 182 EV Sbjct: 404 EV 405