BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0244.0020.p (437 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08628753.1| hypothetical protein CSIRO_1837 [Bradyrhizobi... 422 e-116 ref|YP_004012807.1| hypothetical protein Rvan_2493 [Rhodomicrobi... 411 e-112 ref|YP_004011326.1| hypothetical protein Rvan_0951 [Rhodomicrobi... 404 e-110 ref|YP_576335.1| hypothetical protein Nham_1027 [Nitrobacter ham... 402 e-110 ref|ZP_01046408.1| hypothetical protein NB311A_12899 [Nitrobacte... 401 e-109 >ref|ZP_08628753.1| hypothetical protein CSIRO_1837 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08558.1| hypothetical protein CSIRO_1837 [Bradyrhizobiaceae bacterium SG-6C] Length = 391 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 203/374 (54%), Positives = 258/374 (68%), Gaps = 4/374 (1%) Query: 51 IVRSDLEHCPRWQFAFASERKDHRYYELVEDTLHPEVDYRYFLIKDAVDQVCAVQPFFLM 110 + R++L C W+ FASERKDHRYYE++EDTL DYRYF I+DA Q+ AVQPFFL+ Sbjct: 21 VSRAELSSCEVWRTMFASERKDHRYYEIIEDTLREGFDYRYFAIRDANGQIRAVQPFFLL 80 Query: 111 DLDMLAGASPRFGVLIDAIRRMWPGLMRARALMVGCVAGEGHLD-GNEACHRGCAELLAS 169 D D+L G + L+ IRR +P ++ R LMVGC AGEGHL G+ A++L+ Sbjct: 81 DQDVLEGMGSEWR-LVWLIRRRYPRFLKLRTLMVGCTAGEGHLAVGDGVSVESVADVLSR 139 Query: 170 TIAIHARRLGARLIVLKEFPARYRPILDCLIAHGFTRIPSLPMTRLCIDYANFDDYMNHA 229 I A++LGA LIVLKEFP YR C + GF R PS+PMT+L I+Y NFD ++ A Sbjct: 140 DIGKLAKQLGAHLIVLKEFPVGYREAFACFLQRGFGRAPSMPMTKLNIEYENFDRFIEKA 199 Query: 230 LNSATRKKLRKKFEATARASPSVEMNVVNDATPVIAQIYPLYFQVYQRSKLHFEKLTEQY 289 L+ RK +R+ +A+A + M V +D ++ +IYPLY QVY+RSK FEKLT+ Y Sbjct: 200 LSGKARKNVRRNLQASA--GEDIRMTVTDDTANLVDEIYPLYLQVYERSKFRFEKLTKDY 257 Query: 290 FCDLGRRMGDKVRFFLWRQNERIVAFAACMVHGDAIYAEYIGLDYDVALDLHLYHYVFRD 349 F ++G +M DKVR F W + +VAF CMV GD ++EY+G DY VAL+LHLY V RD Sbjct: 258 FREVGTQMKDKVRVFTWHRGNTLVAFNICMVQGDQFFSEYVGFDYSVALNLHLYFCVVRD 317 Query: 350 MVSWAIANGYKWFRSSGLNYDPKLHLRHLLDPIDLYVRHTSAPVNSVLKRILPVLEPTRY 409 ++WAIA GYKWFRSSGLNYDPKLHLRH LDP+DLYVRH S N VLKR+LP L P RY Sbjct: 318 TINWAIAGGYKWFRSSGLNYDPKLHLRHQLDPVDLYVRHVSPVANMVLKRVLPWLSPVRY 377 Query: 410 DQTLAKFRNYQELW 423 D+TL KF NY+E+W Sbjct: 378 DETLKKFPNYREMW 391 >ref|YP_004012807.1| hypothetical protein Rvan_2493 [Rhodomicrobium vannielii ATCC 17100] gb|ADP71708.1| hypothetical protein Rvan_2493 [Rhodomicrobium vannielii ATCC 17100] Length = 430 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 211/426 (49%), Positives = 278/426 (65%), Gaps = 25/426 (5%) Query: 4 RRDKCCPRAGIR---GEREIVPEAATAHLTSQIGDLTGREPMQCPPHLQVIVRSDLEHCP 60 RRD P +G+ R+ PEA T+ + P + V +++E Sbjct: 25 RRD--APESGVLYRVPSRDYAPEARTS---------------RGPDSVSVATYAEIEASG 67 Query: 61 RWQFAFASERKDHRYYELVEDTLHPEVDYRYFLIKDAVDQVCAVQPFFLMDLDMLAGASP 120 W AF+ + KD RYY +V++TLHPE YRYF+++D + A+QPFF++D D+LAGAS Sbjct: 68 GWDTAFSGQYKDGRYYRIVQETLHPEHSYRYFVLRDQAGRQKAIQPFFVLDQDILAGASG 127 Query: 121 RFGVLIDAIRRMWPGLMRARALMVGCVAGEGHLDGNEACH--RGCAELLASTIAIHARRL 178 +D +R +P + R LMVGC+AGEGHLD +A + C+ LLA A++ Sbjct: 128 TIKAAVDTVRHRFPKFLTLRTLMVGCIAGEGHLDNRDAFADPKTCS-LLAQATLDEAKKE 186 Query: 179 GARLIVLKEFPARYRPILDCLIAHGFTRIPSLPMTRLCIDYANFDDYMNHALNSATRKKL 238 A LIV KEFP+ YR +L L GF +PSLPM L + +FD YM +L+ ATRK L Sbjct: 187 RAGLIVFKEFPSAYREVLGHLKDDGFICLPSLPMASLSTAHKDFDAYMAASLSRATRKDL 246 Query: 239 RKKFEATARASPSVEMNVVNDATPVIAQIYPLYFQVYQRSKLHFEKLTEQYFCDLGRRMG 298 R+KF+A S + M+VV D TP++ +IYPLY VY RSKLHFEKLT+ Y C LG+RM Sbjct: 247 RRKFKAAQ--SAGLTMSVVEDVTPIVDEIYPLYLNVYNRSKLHFEKLTKDYLCALGQRMP 304 Query: 299 DKVRFFLWRQNERIVAFAACMVHGDAIYAEYIGLDYDVALDLHLYHYVFRDMVSWAIANG 358 D+ RFF+WR+ +RIVAF CMVH DAIY +YIGLDY+VALDLHLYHY RD++SWA+ANG Sbjct: 305 DRTRFFVWRRGDRIVAFNLCMVHNDAIYDQYIGLDYEVALDLHLYHYTIRDIMSWAMANG 364 Query: 359 YKWFRSSGLNYDPKLHLRHLLDPIDLYVRHTSAPVNSVLKRILPVLEPTRYDQTLAKFRN 418 Y+ + S+GLNYDPK HLR LDP+DLY RH S +N+ +K +LP LEPT+YD L KF N Sbjct: 365 YQRYVSNGLNYDPKHHLRMQLDPLDLYARHRSPVINAAMKVVLPYLEPTKYDPHLKKFAN 424 Query: 419 YQELWA 424 Y +L A Sbjct: 425 YSDLRA 430 >ref|YP_004011326.1| hypothetical protein Rvan_0951 [Rhodomicrobium vannielii ATCC 17100] gb|ADP70227.1| protein of unknown function DUF482 [Rhodomicrobium vannielii ATCC 17100] Length = 409 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 196/377 (51%), Positives = 257/377 (68%), Gaps = 3/377 (0%) Query: 48 LQVIVRSDLEHCPRWQFAFASERKDHRYYELVEDTLHPEVDYRYFLIKDAVDQVCAVQPF 107 + V+ R L P W AFA RKD RYYE+VEDT+ PE YRYF + D + AVQPF Sbjct: 29 VSVVERRSLVGMPAWSNAFAHLRKDSRYYEIVEDTVCPEFRYRYFALTDRFGRAMAVQPF 88 Query: 108 FLMDLDMLAGASPRFGVLIDAIRRMWPGLMRARALMVGCVAGEGHLDGNEACHRG-CAEL 166 F++D D++AG+ R +D +RR+WP + R LM+GC AGEGHL + R AE+ Sbjct: 89 FVLDQDLVAGSGQRLKGFVDRVRRVWPRFLTMRTLMMGCAAGEGHLAAKDQATRAREAEV 148 Query: 167 LASTIAIHARRLGARLIVLKEFPARYRPILDCLIAHGFTRIPSLPMTRLCID-YANFDDY 225 L++ I AR A LIVLKEFPA YR L GFT IPS+PMTRL I Y +FDDY Sbjct: 149 LSADIVRLARAEKASLIVLKEFPAEYREALSAFREKGFTAIPSMPMTRLDISTYKSFDDY 208 Query: 226 MNHALNSATRKKLRKKFEATARASPSVEMNVVNDATPVIAQIYPLYFQVYQRSKLHFEKL 285 +N A+ S R + RKKF+A +++P +E+ V ++A + QI+ LY QVY++S + FEKL Sbjct: 209 LNKAIKSKRRTEFRKKFKAAEQSAP-IELEVRHNAGDALDQIFALYEQVYEKSDMKFEKL 267 Query: 286 TEQYFCDLGRRMGDKVRFFLWRQNERIVAFAACMVHGDAIYAEYIGLDYDVALDLHLYHY 345 T+ YF +LGRRM DK RFF+WRQ R++AF+ C++ GD +Y EY+GLDY +AL LHLY Y Sbjct: 268 TKAYFAELGRRMPDKARFFIWRQEGRVIAFSLCLIEGDKLYGEYLGLDYTIALQLHLYFY 327 Query: 346 VFRDMVSWAIANGYKWFRSSGLNYDPKLHLRHLLDPIDLYVRHTSAPVNSVLKRILPVLE 405 V RD +SWAI NG+K S+ L Y PKL +RH L P+DLYVRHTS N++L+R+LP LE Sbjct: 328 VMRDTISWAIENGFKEIVSTSLGYGPKLQMRHELRPLDLYVRHTSPIANAILRRVLPYLE 387 Query: 406 PTRYDQTLAKFRNYQEL 422 PTR ++TL KF NY +L Sbjct: 388 PTRGEETLQKFPNYADL 404 >ref|YP_576335.1| hypothetical protein Nham_1027 [Nitrobacter hamburgensis X14] gb|ABE61875.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 387 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 205/383 (53%), Positives = 252/383 (65%), Gaps = 5/383 (1%) Query: 44 CPPHLQV--IVRSDLEHCPRWQFAFASERKDHRYYELVEDTLHPEVDYRYFLIKDAVDQV 101 P L V I R +L C W+ AFA RKDHRYYE++ DT+ +Y YF I+DA +V Sbjct: 7 APDSLSVAPISRDELRTCEAWRTAFADRRKDHRYYEIIADTIRDRFEYGYFAIRDASGRV 66 Query: 102 CAVQPFFLMDLDMLAGASPRFGVLIDAIRRMWPGLMRARALMVGCVAGEGHLDGN-EACH 160 AVQP+FL+D D+L G L+ +IRR +P ++ R LM+GC AGEGHL + Sbjct: 67 LAVQPYFLLDQDVLEGVKLDGWSLVASIRRRYPRFLKLRTLMLGCTAGEGHLATSAHLSS 126 Query: 161 RGCAELLASTIAIHARRLGARLIVLKEFPARYRPILDCLIAHGFTRIPSLPMTRLCIDYA 220 A LA I AR LGA++IVLKEFP R L C GF R PS+PMT L IDY Sbjct: 127 TAIAMALAQGIVAQARALGAQMIVLKEFPRGDRRDLACFEREGFGRAPSMPMTILDIDYD 186 Query: 221 NFDDYMNHALNSATRKKLRKKFEATARASPSVEMNVVNDATPVIAQIYPLYFQVYQRSKL 280 +FDDYM AL++ TR+ LRKKF T + + M V ++A I ++YPLY Q Y+ S Sbjct: 187 SFDDYMQKALSAKTRRHLRKKFLGTE--NSGLAMTVADNAASFIDELYPLYLQTYEHSNF 244 Query: 281 HFEKLTEQYFCDLGRRMGDKVRFFLWRQNERIVAFAACMVHGDAIYAEYIGLDYDVALDL 340 HFEKLT YF LG M DK RFF+W + ++AFA CMV GD I+AEYIGLDYD A DL Sbjct: 245 HFEKLTRDYFRRLGCEMSDKTRFFIWDRGNTLMAFALCMVEGDDIFAEYIGLDYDFAFDL 304 Query: 341 HLYHYVFRDMVSWAIANGYKWFRSSGLNYDPKLHLRHLLDPIDLYVRHTSAPVNSVLKRI 400 HLYHY+ RDM+SWA+A+GYK FRSSGLNYDPKLHLRH LDPIDLYVR S N +L+ + Sbjct: 305 HLYHYITRDMISWAMAHGYKRFRSSGLNYDPKLHLRHRLDPIDLYVRLVSPFANRILRLV 364 Query: 401 LPVLEPTRYDQTLAKFRNYQELW 423 LP + P RYD TL KF +Y E+W Sbjct: 365 LPWIVPVRYDATLRKFSDYHEMW 387 >ref|ZP_01046408.1| hypothetical protein NB311A_12899 [Nitrobacter sp. Nb-311A] gb|EAQ35722.1| hypothetical protein NB311A_12899 [Nitrobacter sp. Nb-311A] Length = 387 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 203/383 (53%), Positives = 253/383 (66%), Gaps = 5/383 (1%) Query: 44 CPPHLQV--IVRSDLEHCPRWQFAFASERKDHRYYELVEDTLHPEVDYRYFLIKDAVDQV 101 P L + I R +L C W+ AFA +RKDHRYYE++ DT+ +Y YF I+DA +V Sbjct: 7 APESLSIAPISRDELRTCEAWRIAFAGQRKDHRYYEIIADTIRDHFEYGYFAIRDASGRV 66 Query: 102 CAVQPFFLMDLDMLAGASPRFGVLIDAIRRMWPGLMRARALMVGCVAGEGHLDGNEACHR 161 AVQP+FL+D D+L G L+ IRR +P ++ R LM+GC AGEGHL + Sbjct: 67 LAVQPYFLLDQDVLEGIKLDRLSLVARIRRRYPRFLKLRTLMLGCTAGEGHLAASAYLSS 126 Query: 162 GC-AELLASTIAIHARRLGARLIVLKEFPARYRPILDCLIAHGFTRIPSLPMTRLCIDYA 220 A+ LA I A LGAR+IVLKEF R L C GF R PS+PMT L IDY Sbjct: 127 ATVAKTLAQGIVAQANALGARMIVLKEFSRGDRRDLACFEREGFARAPSMPMTTLDIDYD 186 Query: 221 NFDDYMNHALNSATRKKLRKKFEATARASPSVEMNVVNDATPVIAQIYPLYFQVYQRSKL 280 NFD+Y AL++ TR+ LRKKF AT ++M V +A I +IYPLY Q Y+RS Sbjct: 187 NFDEYTQKALSAKTRRDLRKKFRATK--GSRLQMTVTENAANFIDEIYPLYLQSYERSNF 244 Query: 281 HFEKLTEQYFCDLGRRMGDKVRFFLWRQNERIVAFAACMVHGDAIYAEYIGLDYDVALDL 340 HFEKLT+ YF LG M DK RFF+W + ++AFA CMV GD I+AEYIGLDY ALDL Sbjct: 245 HFEKLTKDYFRRLGCEMSDKTRFFIWYRGNTLMAFALCMVEGDEIFAEYIGLDYHFALDL 304 Query: 341 HLYHYVFRDMVSWAIANGYKWFRSSGLNYDPKLHLRHLLDPIDLYVRHTSAPVNSVLKRI 400 HLYHYV RD++SWA+A+GYK FRSSGLNYDPKLHL H LDPIDLYVRH S N +++ + Sbjct: 305 HLYHYVSRDVISWAMAHGYKRFRSSGLNYDPKLHLGHRLDPIDLYVRHVSPVANWIMRLV 364 Query: 401 LPVLEPTRYDQTLAKFRNYQELW 423 LP + P RYD TL KF +Y+++W Sbjct: 365 LPWIVPVRYDATLRKFASYRQIW 387