BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0244.0017.p         (143 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774471.1| transcriptional regulator [Bradyrhizobium japon...   238   2e-61
ref|YP_001242873.1| MarR family transcriptional regulator [Brady...   236   1e-60
ref|YP_487176.1| MarR family transcriptional regulator [Rhodopse...   233   5e-60
ref|YP_001203124.1| MarR family transcriptional regulator [Brady...   231   2e-59
ref|NP_947139.1| MarR family transcriptional regulator [Rhodopse...   227   5e-58

>ref|NP_774471.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53096.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA
           110]
          Length = 177

 Score =  238 bits (608), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 117/142 (82%), Positives = 130/142 (91%)

Query: 2   LQLGELSGLLGYSLKRAQLRVFEDFLRCVAPLQLTPAQFSVLLLLDKNPGRNQTEIANTL 61
           LQLGELS  LGY LKRAQL+VFE+FLRC+A LQLTPAQFSVLLL++KNPGRNQTEIA+TL
Sbjct: 36  LQLGELSEQLGYVLKRAQLKVFENFLRCMASLQLTPAQFSVLLLVEKNPGRNQTEIASTL 95

Query: 62  GILRPNFVAMLDALESRDLCARMRSTNDRRSHILVLTDKGRAVLARAKKLVANKHEARLI 121
           GILRPNFVAMLD LESRDLCAR+RSTNDRRSHILVLTDKG+AVL RAKKLVA KHEARL 
Sbjct: 96  GILRPNFVAMLDNLESRDLCARIRSTNDRRSHILVLTDKGKAVLTRAKKLVATKHEARLN 155

Query: 122 EVLGPANHAALLEMLAKLAQEF 143
           ++LG AN  AL+EML+K+A EF
Sbjct: 156 DLLGQANREALIEMLSKIANEF 177


>ref|YP_001242873.1| MarR family transcriptional regulator [Bradyrhizobium sp. BTAi1]
 gb|ABQ38967.1| transcriptional regulator, MarR family [Bradyrhizobium sp. BTAi1]
          Length = 170

 Score =  236 bits (602), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 115/142 (80%), Positives = 128/142 (90%)

Query: 2   LQLGELSGLLGYSLKRAQLRVFEDFLRCVAPLQLTPAQFSVLLLLDKNPGRNQTEIANTL 61
           +QLGELS LLGY LKRAQL+VFEDFLRCVAPLQLTPAQFSVLLLLD NPGRNQTEIANTL
Sbjct: 29  VQLGELSDLLGYVLKRAQLKVFEDFLRCVAPLQLTPAQFSVLLLLDGNPGRNQTEIANTL 88

Query: 62  GILRPNFVAMLDALESRDLCARMRSTNDRRSHILVLTDKGRAVLARAKKLVANKHEARLI 121
           GILRPNFV++LD+LESRDLC+R+RS NDRRSHIL+LTDKGR+VLARAKKLV  KHEARL 
Sbjct: 89  GILRPNFVSLLDSLESRDLCSRVRSANDRRSHILMLTDKGRSVLARAKKLVVTKHEARLN 148

Query: 122 EVLGPANHAALLEMLAKLAQEF 143
           E+LGP     LL ML K+A++F
Sbjct: 149 ELLGPDGRETLLAMLTKIAEDF 170


>ref|YP_487176.1| MarR family transcriptional regulator [Rhodopseudomonas palustris
           HaA2]
 gb|ABD08265.1| transcriptional regulator, MarR family [Rhodopseudomonas palustris
           HaA2]
          Length = 171

 Score =  233 bits (595), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 117/142 (82%), Positives = 126/142 (88%)

Query: 2   LQLGELSGLLGYSLKRAQLRVFEDFLRCVAPLQLTPAQFSVLLLLDKNPGRNQTEIANTL 61
           L +GELS LLGY+LKRAQLRVFEDFL+CVAP+QLTPAQFSVLLLLD NPGRNQTEIANTL
Sbjct: 30  LAMGELSELLGYALKRAQLRVFEDFLQCVAPVQLTPAQFSVLLLLDNNPGRNQTEIANTL 89

Query: 62  GILRPNFVAMLDALESRDLCARMRSTNDRRSHILVLTDKGRAVLARAKKLVANKHEARLI 121
           GILRPNFVAMLDALESR LC R RS NDRRSHIL+LTDKGRA LARAKKLVA +HE RL 
Sbjct: 90  GILRPNFVAMLDALESRGLCQRTRSPNDRRSHILILTDKGRATLARAKKLVATRHEERLS 149

Query: 122 EVLGPANHAALLEMLAKLAQEF 143
           E+LG  N AALL ML K+A+EF
Sbjct: 150 ELLGDDNRAALLAMLGKIAREF 171


>ref|YP_001203124.1| MarR family transcriptional regulator [Bradyrhizobium sp. ORS 278]
 emb|CAL74887.1| putative transcriptional regulator, MarR family [Bradyrhizobium sp.
           ORS 278]
          Length = 168

 Score =  231 bits (590), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 113/142 (79%), Positives = 126/142 (88%)

Query: 2   LQLGELSGLLGYSLKRAQLRVFEDFLRCVAPLQLTPAQFSVLLLLDKNPGRNQTEIANTL 61
           +QLGELS LLGY LKRAQL+VFEDFLRCVAPLQLTPAQFSVLLLLD NPGRNQTEIANTL
Sbjct: 27  VQLGELSDLLGYVLKRAQLKVFEDFLRCVAPLQLTPAQFSVLLLLDANPGRNQTEIANTL 86

Query: 62  GILRPNFVAMLDALESRDLCARMRSTNDRRSHILVLTDKGRAVLARAKKLVANKHEARLI 121
           GILRPNFV++LD+LE RDLC R+RS NDRRSHIL+LT+KG+ VLARAKKLV +KHEARL 
Sbjct: 87  GILRPNFVSLLDSLEGRDLCIRVRSANDRRSHILLLTEKGKGVLARAKKLVMSKHEARLN 146

Query: 122 EVLGPANHAALLEMLAKLAQEF 143
           E+LGP     LL ML K+A+EF
Sbjct: 147 ELLGPDGRETLLAMLTKIAEEF 168


>ref|NP_947139.1| MarR family transcriptional regulator [Rhodopseudomonas palustris
           CGA009]
 emb|CAE27235.1| transcriptional regulator, MarR family [Rhodopseudomonas palustris
           CGA009]
          Length = 183

 Score =  227 bits (578), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 113/142 (79%), Positives = 123/142 (86%)

Query: 2   LQLGELSGLLGYSLKRAQLRVFEDFLRCVAPLQLTPAQFSVLLLLDKNPGRNQTEIANTL 61
           L++GELS LLGY+LKRAQLRVFEDFL CVAP+QLTPAQFSVLLLLD NPGRNQTEIA TL
Sbjct: 42  LKMGELSELLGYALKRAQLRVFEDFLHCVAPVQLTPAQFSVLLLLDANPGRNQTEIATTL 101

Query: 62  GILRPNFVAMLDALESRDLCARMRSTNDRRSHILVLTDKGRAVLARAKKLVANKHEARLI 121
           GILRPNFVAMLDALE R LC R RS +DRRSHIL+LTDKGRA LARAKKLVA +HE RL 
Sbjct: 102 GILRPNFVAMLDALEGRGLCVRTRSPSDRRSHILMLTDKGRATLARAKKLVATRHEDRLT 161

Query: 122 EVLGPANHAALLEMLAKLAQEF 143
           E+LG  N  ALL MLA +A+EF
Sbjct: 162 ELLGRDNRDALLSMLATIAREF 183