BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0244.0007.p (217 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768865.1| amino acid ABC transporter permease protein [Br... 385 e-105 ref|YP_002497668.1| polar amino acid ABC transporter inner membr... 361 5e-98 ref|YP_001770403.1| polar amino acid ABC transporter inner membr... 350 8e-95 gb|EGP44673.1| putative inner membrane component of binding-prot... 349 2e-94 gb|EFV83948.1| hypothetical protein HMPREF0005_01969 [Achromobac... 347 5e-94 >ref|NP_768865.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] dbj|BAC47490.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 217 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 189/217 (87%), Positives = 205/217 (94%) Query: 1 MQKFFHDAVEFVPILLQGVWLTIVVTVGSLLLSTVLGLVWALMRVSGIRVLVGFSAALIN 60 M+ F+HDA EF PIL+ GV LTIVVT+GSLLLSTVLGL+WA+MRVSGI+VL SA+LIN Sbjct: 1 MKGFWHDAAEFFPILMSGVALTIVVTIGSLLLSTVLGLIWAMMRVSGIKVLSMLSASLIN 60 Query: 61 VIRGIPIIVLLFYIYFVMPDFGIALSALQAAIIGLGIAYSAYQAENFRAGIEAIDKGQIE 120 VIRGIPIIVLLFY+YFVMPD G+ LSALQAAI+GLGIAYSAYQAENFRAGIEAIDKGQIE Sbjct: 61 VIRGIPIIVLLFYLYFVMPDLGVTLSALQAAILGLGIAYSAYQAENFRAGIEAIDKGQIE 120 Query: 121 AAQTIGMGWWLTMRRVVLPQAVRIILPPYGNIMIMMLKDSSQASTITVAELALQGKLIAS 180 AAQ+IGMGWWLTMRRVVLPQAVRI+LPPYGN+MIMMLKDSSQASTITVAELALQGKLIAS Sbjct: 121 AAQSIGMGWWLTMRRVVLPQAVRIVLPPYGNVMIMMLKDSSQASTITVAELALQGKLIAS 180 Query: 181 STFKNTSVFTLVALMYLTMSIPLILLVRHFENKANRK 217 STFKNTSVFTLVALMYLTMSIPLILLVRHFE +A +K Sbjct: 181 STFKNTSVFTLVALMYLTMSIPLILLVRHFEKRAGKK 217 >ref|YP_002497668.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gb|ACL57365.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 217 Score = 361 bits (926), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 177/216 (81%), Positives = 197/216 (91%) Query: 1 MQKFFHDAVEFVPILLQGVWLTIVVTVGSLLLSTVLGLVWALMRVSGIRVLVGFSAALIN 60 M+ F DA EFVPILLQGV LTI++TVGSL++ST LGLVWA+MRVSGI +L G SA IN Sbjct: 1 MESFLADAREFVPILLQGVQLTILITVGSLVVSTALGLVWAMMRVSGIPLLSGLSATFIN 60 Query: 61 VIRGIPIIVLLFYIYFVMPDFGIALSALQAAIIGLGIAYSAYQAENFRAGIEAIDKGQIE 120 VIRGIPIIV LFYIYFV+PDFGIAL+A+QA ++GLG+AYSAYQAENFRA IEAIDKGQIE Sbjct: 61 VIRGIPIIVQLFYIYFVLPDFGIALTAVQAGVLGLGLAYSAYQAENFRAAIEAIDKGQIE 120 Query: 121 AAQTIGMGWWLTMRRVVLPQAVRIILPPYGNIMIMMLKDSSQASTITVAELALQGKLIAS 180 AAQTIGMGW LTMRRVVLPQA+RI LPPYGN+MIMMLKDSSQASTITVAELALQGKLIAS Sbjct: 121 AAQTIGMGWGLTMRRVVLPQALRIALPPYGNVMIMMLKDSSQASTITVAELALQGKLIAS 180 Query: 181 STFKNTSVFTLVALMYLTMSIPLILLVRHFENKANR 216 +TFKNTSVFTLVALMYLT+S+PLIL+VRHFE + R Sbjct: 181 ATFKNTSVFTLVALMYLTLSLPLILIVRHFEKRTGR 216 >ref|YP_001770403.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gb|ACA17969.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 217 Score = 350 bits (898), Expect = 8e-95, Method: Compositional matrix adjust. Identities = 173/217 (79%), Positives = 194/217 (89%) Query: 1 MQKFFHDAVEFVPILLQGVWLTIVVTVGSLLLSTVLGLVWALMRVSGIRVLVGFSAALIN 60 M F DA EFVPILLQGV LTI++T+GSL++STVLGLVWA+MRVSG+R L SA IN Sbjct: 1 MDSFLADAREFVPILLQGVQLTILITLGSLVVSTVLGLVWAMMRVSGVRSLAFASALFIN 60 Query: 61 VIRGIPIIVLLFYIYFVMPDFGIALSALQAAIIGLGIAYSAYQAENFRAGIEAIDKGQIE 120 VIRGIPIIV LFYIYFV+PDFGIAL+A+QA ++GLG+AYSAY AENFRA IEAID GQIE Sbjct: 61 VIRGIPIIVQLFYIYFVLPDFGIALTAVQAGVLGLGLAYSAYHAENFRAAIEAIDGGQIE 120 Query: 121 AAQTIGMGWWLTMRRVVLPQAVRIILPPYGNIMIMMLKDSSQASTITVAELALQGKLIAS 180 AAQTIGMGW LTMRRVVLPQA+RI LPPYGN+MIMMLKDSSQASTITVAELALQGKLIAS Sbjct: 121 AAQTIGMGWGLTMRRVVLPQALRIALPPYGNVMIMMLKDSSQASTITVAELALQGKLIAS 180 Query: 181 STFKNTSVFTLVALMYLTMSIPLILLVRHFENKANRK 217 +TFKNTSVFTLVALMYL +S+PLIL+VRH E +A R+ Sbjct: 181 ATFKNTSVFTLVALMYLALSLPLILIVRHTEKRAGRR 217 >gb|EGP44673.1| putative inner membrane component of binding-protein-dependent transport system [Achromobacter xylosoxidans AXX-A] Length = 217 Score = 349 bits (896), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 171/217 (78%), Positives = 194/217 (89%) Query: 1 MQKFFHDAVEFVPILLQGVWLTIVVTVGSLLLSTVLGLVWALMRVSGIRVLVGFSAALIN 60 M +FF DA E++PILLQG LTI+VT+GSL+LST+LGLVWALMRVSG + L FSA +IN Sbjct: 1 MTEFFKDAAEYLPILLQGAKLTILVTLGSLVLSTLLGLVWALMRVSGNKYLSKFSAGVIN 60 Query: 61 VIRGIPIIVLLFYIYFVMPDFGIALSALQAAIIGLGIAYSAYQAENFRAGIEAIDKGQIE 120 ++RGIPIIVLLFYIYFVMPD GIAL+A+QAAIIGLGIAYSAYQAENFRAGIEAID+GQIE Sbjct: 61 LLRGIPIIVLLFYIYFVMPDMGIALTAVQAAIIGLGIAYSAYQAENFRAGIEAIDRGQIE 120 Query: 121 AAQTIGMGWWLTMRRVVLPQAVRIILPPYGNIMIMMLKDSSQASTITVAELALQGKLIAS 180 AA +GM W +TMRRVVLPQAV+I+LPPYGNIMIMMLKDSSQASTITVAELALQGKLIA Sbjct: 121 AAMAMGMSWSMTMRRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVAELALQGKLIAV 180 Query: 181 STFKNTSVFTLVALMYLTMSIPLILLVRHFENKANRK 217 STFKN +VF+LVALMYL M +PLILLVRH E ++ K Sbjct: 181 STFKNATVFSLVALMYLVMCVPLILLVRHLEKRSAAK 217 >gb|EFV83948.1| hypothetical protein HMPREF0005_01969 [Achromobacter xylosoxidans C54] Length = 217 Score = 347 bits (891), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 170/217 (78%), Positives = 194/217 (89%) Query: 1 MQKFFHDAVEFVPILLQGVWLTIVVTVGSLLLSTVLGLVWALMRVSGIRVLVGFSAALIN 60 M +FF DA E++PILL+G LTI+VT+GSL+LST+LGLVWALMRVSG + L FSA +IN Sbjct: 1 MTEFFKDAAEYLPILLEGAKLTILVTLGSLVLSTLLGLVWALMRVSGNKYLSRFSAGVIN 60 Query: 61 VIRGIPIIVLLFYIYFVMPDFGIALSALQAAIIGLGIAYSAYQAENFRAGIEAIDKGQIE 120 ++RGIPIIVLLFYIYFVMPD GIAL+A+QAAIIGLGIAYSAYQAENFRAGIEAID+GQIE Sbjct: 61 LLRGIPIIVLLFYIYFVMPDMGIALTAVQAAIIGLGIAYSAYQAENFRAGIEAIDRGQIE 120 Query: 121 AAQTIGMGWWLTMRRVVLPQAVRIILPPYGNIMIMMLKDSSQASTITVAELALQGKLIAS 180 AA +GM W +TMRRVVLPQAV+I+LPPYGNIMIMMLKDSSQASTITVAELALQGKLIA Sbjct: 121 AAMAMGMSWSMTMRRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVAELALQGKLIAV 180 Query: 181 STFKNTSVFTLVALMYLTMSIPLILLVRHFENKANRK 217 STFKN +VF+LVALMYL M +PLILLVRH E ++ K Sbjct: 181 STFKNATVFSLVALMYLVMCVPLILLVRHLEKRSAAK 217