BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0243.0078.p (196 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769498.1| sulfopyruvate decarboxylase [Bradyrhizobium jap... 301 3e-80 ref|YP_001203572.1| putative sulfopyruvate decarboxylase subunit... 199 2e-49 ref|YP_002501851.1| thiamine pyrophosphate protein domain-contai... 193 1e-47 ref|YP_004611353.1| thiamine pyrophosphate protein domain-contai... 186 2e-45 ref|YP_001766658.1| thiamine pyrophosphate binding domain-contai... 186 2e-45 >ref|NP_769498.1| sulfopyruvate decarboxylase [Bradyrhizobium japonicum USDA 110] dbj|BAC48123.1| blr2858 [Bradyrhizobium japonicum USDA 110] Length = 196 Score = 301 bits (771), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 156/196 (79%), Positives = 172/196 (87%) Query: 1 MSKANLLDRRAVVAELLKDRKGAFAVGGLGASTYDIAAAGDHDRNFYLWGGMGGAVMIGL 60 MSKANLLDRR VV+ LL DRK A+GGLGAST DI AAGDH RNFYLWGGMGGA MIGL Sbjct: 1 MSKANLLDRRQVVSTLLADRKDVVAIGGLGASTNDICAAGDHARNFYLWGGMGGAAMIGL 60 Query: 61 GLALAQPTLPVVVITGDGEMLMGMGSLATVGLQQPKNLSIIVLDNEAYGETGGQASHTGG 120 GLALAQP LPV+VITGDGEMLMGMGSLAT+GLQ+P NLSI+VLDNEAYGETGGQ SHT Sbjct: 61 GLALAQPKLPVLVITGDGEMLMGMGSLATIGLQKPSNLSIVVLDNEAYGETGGQTSHTSA 120 Query: 121 TADLVGVAKACGIGDSRAISTMAEVEAFASSLQDVTAGPRFASAKIDGANLERVLSSRDG 180 ADLVGVA+ACGIGD+RAISTMAEVEAFA ++ DV+AGPRFA+ KID A+LER+L SRDG Sbjct: 121 AADLVGVARACGIGDARAISTMAEVEAFAKAVHDVSAGPRFANVKIDSASLERILPSRDG 180 Query: 181 TYLVNRIRGSIGHTPI 196 TY+VNRIRG +G PI Sbjct: 181 TYIVNRIRGDLGFQPI 196 >ref|YP_001203572.1| putative sulfopyruvate decarboxylase subunit beta [Bradyrhizobium sp. ORS 278] emb|CAL75335.1| Putative sulfopyruvate decarboxylase beta subunit [Bradyrhizobium sp. ORS 278] Length = 199 Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 104/186 (55%), Positives = 126/186 (67%), Gaps = 1/186 (0%) Query: 7 LDRRAVVAELLKDRKGAFAVGGLGASTYDIAAAGDHDRNFYLWGGMGGAVMIGLGLALAQ 66 LDRR V LL+DR + GLG+S+YD+ AAGDHD NFYLWG MGGA MIGLGLALAQ Sbjct: 11 LDRRIAVKALLQDRGDLLVISGLGSSSYDVFAAGDHDANFYLWGAMGGAAMIGLGLALAQ 70 Query: 67 PTLPVVVITGDGEMLMGMGSLATVGLQQPKNLSIIVLDNEAYGETGGQASHTGGTADLVG 126 P+ PV VITGDGE LMG+GSLAT +QP+NLSI+VLDN +GETG Q SH+G A L Sbjct: 71 PSRPVAVITGDGEQLMGLGSLATAAAKQPRNLSIVVLDNAHFGETGMQMSHSGLGARLEL 130 Query: 127 VAKACGIGDSRAISTMAEVEAFASSLQDVTAGPRFASAKIDGANLERVLSSRDGTYLVNR 186 +A G I A + AF L+D+ AGP FA I +++R L +RDG +L NR Sbjct: 131 IAGGAGFPSVTTIEDAAALAAFRPKLRDL-AGPHFARVAIATDHVDRALPARDGVFLKNR 189 Query: 187 IRGSIG 192 RG +G Sbjct: 190 FRGHLG 195 >ref|YP_002501851.1| thiamine pyrophosphate protein domain-containing protein [Methylobacterium nodulans ORS 2060] gb|ACL61548.1| thiamine pyrophosphate protein domain protein TPP-binding [Methylobacterium nodulans ORS 2060] Length = 198 Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 100/190 (52%), Positives = 126/190 (66%), Gaps = 1/190 (0%) Query: 7 LDRRAVVAELLKDRKGAFAVGGLGASTYDIAAAGDHDRNFYLWGGMGGAVMIGLGLALAQ 66 LDRR VVA LL DR V GLG+++YD+ AAGDHD N+YLW MG A M+GLGL A+ Sbjct: 10 LDRRDVVARLLADRTDLLVVTGLGSASYDVMAAGDHDGNYYLWAAMGSAAMVGLGLTTAK 69 Query: 67 PTLPVVVITGDGEMLMGMGSLATVGLQQPKNLSIIVLDNEAYGETGGQASHTGGTADLVG 126 P PV+V+TGDGEMLMG GSLAT+ +++P NL+I VLDN +GETG Q SH G L Sbjct: 70 PDRPVLVVTGDGEMLMGFGSLATIAVRKPANLTIAVLDNGHFGETGMQQSHAGRGIGLDR 129 Query: 127 VAKACGIGDSRAISTMAEVEAFASSLQDVTAGPRFASAKIDGANLERVLSSRDGTYLVNR 186 VA ACG + ++ MA ++A + L+ AG A+ KI N RVL RDG+Y+ NR Sbjct: 130 VAAACGFPWTAEVTDMAGIDALRTRLR-ADAGLGLATVKIKPENPPRVLPPRDGSYIKNR 188 Query: 187 IRGSIGHTPI 196 R +GH PI Sbjct: 189 FRAHLGHAPI 198 >ref|YP_004611353.1| thiamine pyrophosphate protein domain-containing protein [Mesorhizobium opportunistum WSM2075] gb|AEH87259.1| thiamine pyrophosphate protein domain protein TPP-binding protein [Mesorhizobium opportunistum WSM2075] Length = 195 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 94/186 (50%), Positives = 116/186 (62%) Query: 7 LDRRAVVAELLKDRKGAFAVGGLGASTYDIAAAGDHDRNFYLWGGMGGAVMIGLGLALAQ 66 LDRR V +LL R GA V GLG+ TYD+ AAGD + N+YLWG MGGA +IGLGLA AQ Sbjct: 6 LDRRVAVKKLLDARDGALVVTGLGSPTYDVHAAGDRNDNYYLWGAMGGAALIGLGLAQAQ 65 Query: 67 PTLPVVVITGDGEMLMGMGSLATVGLQQPKNLSIIVLDNEAYGETGGQASHTGGTADLVG 126 P V+VITGDGE LM GSLAT+ + +P NL +IVLDN+ +GETG Q+SHTG Sbjct: 66 PDKRVMVITGDGEQLMAFGSLATISVARPSNLDLIVLDNQHFGETGMQSSHTGRGIGFDK 125 Query: 127 VAKACGIGDSRAISTMAEVEAFASSLQDVTAGPRFASAKIDGANLERVLSSRDGTYLVNR 186 VA ACG + + ++ EV+ L+ GPR KI NL R L RD + NR Sbjct: 126 VAAACGFSKTAELRSLEEVDTLCEELRRPAEGPRLFVLKITAENLPRSLPPRDAVEVKNR 185 Query: 187 IRGSIG 192 R +G Sbjct: 186 FRAHLG 191 >ref|YP_001766658.1| thiamine pyrophosphate binding domain-containing protein [Methylobacterium radiotolerans JCM 2831] gb|ACB27856.1| thiamine pyrophosphate protein domain protein TPP-binding [Methylobacterium radiotolerans JCM 2831] Length = 198 Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 98/187 (52%), Positives = 123/187 (65%), Gaps = 1/187 (0%) Query: 7 LDRRAVVAELLKDRKGAFAVGGLGASTYDIAAAGDHDRNFYLWGGMGGAVMIGLGLALAQ 66 L+RR VA LL R + GLG+ +YD+ AAGDH N+YLW MG A +GLGLA+AQ Sbjct: 10 LERREAVARLLAGRDDLLVITGLGSPSYDVMAAGDHPGNYYLWAAMGSAATVGLGLAVAQ 69 Query: 67 PTLPVVVITGDGEMLMGMGSLATVGLQQPKNLSIIVLDNEAYGETGGQASHTGGTADLVG 126 P PV+VITGDGEMLMG+G LAT+ LQ+P NL++ VLDN YGETG QASH G L G Sbjct: 70 PARPVLVITGDGEMLMGLGGLATIALQRPPNLTVAVLDNGHYGETGMQASHAGRGLALEG 129 Query: 127 VAKACGIGDSRAISTMAEVEAFASSLQDVTAGPRFASAKIDGANLERVLSSRDGTYLVNR 186 VA+ACG SRAI+ A ++ + AG FA+ KI N RVL RDG ++ NR Sbjct: 130 VAEACGFPWSRAIADSAGLDTLRDRVA-ARAGLTFAAIKIRPENPPRVLPPRDGVHVKNR 188 Query: 187 IRGSIGH 193 R ++G+ Sbjct: 189 FRAALGY 195