BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0243.0071.p (498 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769508.1| ABC transporter substrate-binding protein [Brad... 899 0.0 ref|YP_001204563.1| putative ABC transporter substrate-binding p... 797 0.0 ref|YP_001238884.1| putative ABC transporter substrate-binding p... 792 0.0 ref|YP_001523693.1| ABC transporter substrate-binding protein [A... 571 e-160 ref|YP_004369070.1| ABC transporter periplasmic protein [Marinit... 545 e-153 >ref|NP_769508.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC48133.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 510 Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/498 (86%), Positives = 465/498 (93%) Query: 1 LAVLMAALVTWCGTSARAETTLRIGLAEDPDILDPSIGRTYVGRIVFSAFCDKLFDIDEK 60 L +L +AL+T +A+A+TTLRIG+AEDPDILDPSIGRTYVGRIVFSAFCDKLFDIDEK Sbjct: 13 LTILASALLTSLVGTAQAQTTLRIGIAEDPDILDPSIGRTYVGRIVFSAFCDKLFDIDEK 72 Query: 61 LNIVPQLALSYENSADGKEMTIKLRPGVKFHDGEPFDAEAAKFSLERHLTLPTSFRKPEL 120 LNIVPQLALS+E SADGKEMTIKLRPGVKFHDGEP DAEAAKFS+ERH+TLP SFRK EL Sbjct: 73 LNIVPQLALSHETSADGKEMTIKLRPGVKFHDGEPLDAEAAKFSIERHMTLPASFRKSEL 132 Query: 121 AALDHVDVVDPLTIKLVLKTPYSPLIAQLTDRAGMMVSPKAVKEAGDKFGLHPVCAGPYK 180 A++DHV+VVDPLTIKLVLKTPYSPLIAQLTDR+GMMVSPKA KEAGDKFGLHPVCAGPYK Sbjct: 133 ASVDHVEVVDPLTIKLVLKTPYSPLIAQLTDRSGMMVSPKAAKEAGDKFGLHPVCAGPYK 192 Query: 181 FVERVQQDRMVFEKFGDYWNKDNVFIDRIVFLPIVDATVRLANLKSGGLDLIERVLATDI 240 FVERVQQDRMVFEKF DYWNKDN+ IDR+VFLPIVDATVRLANLKSGGLDLIERVLATDI Sbjct: 193 FVERVQQDRMVFEKFADYWNKDNIHIDRVVFLPIVDATVRLANLKSGGLDLIERVLATDI 252 Query: 241 KDVRADKRLVLSTAPELGYLGLTINIGNDKSKGPLSQSEKVRQALDLSIDREALNQVVFN 300 KDVRAD +LVLSTAPELGY GLTINIGNDK+KGPLSQS KVRQAL LSIDREA+NQVVFN Sbjct: 253 KDVRADPKLVLSTAPELGYQGLTINIGNDKTKGPLSQSAKVRQALSLSIDREAINQVVFN 312 Query: 301 GEFTPGNQWVSPTHPYYQKAFPVRGRDIAKAKALLKEAGVTLPVAIDYMVPKGAENEAVA 360 GEFTPGNQWVSPTHPYYQKAFP+ GRDIAKAKALLKEAGV+LPV +DYMVPKG E EAVA Sbjct: 313 GEFTPGNQWVSPTHPYYQKAFPIPGRDIAKAKALLKEAGVSLPVTVDYMVPKGTEYEAVA 372 Query: 361 QVVQSMAAEAGFDIKIRVVEFATTFKQAQAGEFQVFQINWSGRIDPDGNSYVFLHTKAPQ 420 QVVQSMAAEAGFDIK+RVVEFATTFKQAQAGEFQVFQINWSGRIDPDGNSY+F+ +KAPQ Sbjct: 373 QVVQSMAAEAGFDIKVRVVEFATTFKQAQAGEFQVFQINWSGRIDPDGNSYIFMRSKAPQ 432 Query: 421 NDGGYSNAEADKLMEDARLINDPVQRKAIYEKMTRIVLNDEPIIYIYHRTLLIAHSTKVE 480 NDG YSN EADKLME+ R ++ +RKAIY K+T+I+L+D PIIYIYHRTLLIAH+ K+E Sbjct: 433 NDGVYSNPEADKLMEEGRATSNVEERKAIYAKLTKILLDDLPIIYIYHRTLLIAHTKKLE 492 Query: 481 GYRQMPDGLVRVVGLKLK 498 GYRQMPDGLVRVVGLK K Sbjct: 493 GYRQMPDGLVRVVGLKFK 510 >ref|YP_001204563.1| putative ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL76326.1| putative ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS 278] Length = 490 Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust. Identities = 375/487 (77%), Positives = 433/487 (88%) Query: 12 CGTSARAETTLRIGLAEDPDILDPSIGRTYVGRIVFSAFCDKLFDIDEKLNIVPQLALSY 71 CGT+A+A+TTLRIGLAED DILDP++ RTYVGRIVF+A CDKLFDIDEKLNIVPQLALS+ Sbjct: 4 CGTAAQAQTTLRIGLAEDADILDPTMARTYVGRIVFAAVCDKLFDIDEKLNIVPQLALSH 63 Query: 72 ENSADGKEMTIKLRPGVKFHDGEPFDAEAAKFSLERHLTLPTSFRKPELAALDHVDVVDP 131 E SADGKE+TI+LRPGVKFHDGEPFDAEAAKFSL+RHL++P SFRKPE+A+LDHVDVVDP Sbjct: 64 ETSADGKEVTIRLRPGVKFHDGEPFDAEAAKFSLDRHLSMPGSFRKPEIASLDHVDVVDP 123 Query: 132 LTIKLVLKTPYSPLIAQLTDRAGMMVSPKAVKEAGDKFGLHPVCAGPYKFVERVQQDRMV 191 LTIKLVLKTP+SPL+AQLTDRAGMMVSPKA KEAGDKFGL PVCAGPYKFVERVQQDR+V Sbjct: 124 LTIKLVLKTPFSPLLAQLTDRAGMMVSPKAAKEAGDKFGLRPVCAGPYKFVERVQQDRIV 183 Query: 192 FEKFGDYWNKDNVFIDRIVFLPIVDATVRLANLKSGGLDLIERVLATDIKDVRADKRLVL 251 FEKF DYWNKDNVFID+IV+ PIVDATVRLANLKSG LD+IER+LATDIKDV +DKRL L Sbjct: 184 FEKFADYWNKDNVFIDKIVYQPIVDATVRLANLKSGSLDMIERLLATDIKDVTSDKRLKL 243 Query: 252 STAPELGYLGLTINIGNDKSKGPLSQSEKVRQALDLSIDREALNQVVFNGEFTPGNQWVS 311 STA LGY GLT+NIG DK+KGPLSQS KVRQALDLSIDREALNQVVFNGEF PGNQ+V+ Sbjct: 244 STATSLGYRGLTLNIGKDKTKGPLSQSAKVRQALDLSIDREALNQVVFNGEFKPGNQFVN 303 Query: 312 PTHPYYQKAFPVRGRDIAKAKALLKEAGVTLPVAIDYMVPKGAENEAVAQVVQSMAAEAG 371 P +PYYQ AFPVRGRD+ KAKALLKEAGV PV +D+MVPK +E+EA AQV+Q+MAAEAG Sbjct: 304 PENPYYQSAFPVRGRDVEKAKALLKEAGVAPPVTVDFMVPKESESEAAAQVLQAMAAEAG 363 Query: 372 FDIKIRVVEFATTFKQAQAGEFQVFQINWSGRIDPDGNSYVFLHTKAPQNDGGYSNAEAD 431 FD+KIR+ EFAT+ KQA+AGE+Q + + WSGR DPDGN+Y LH+ A N +SNA AD Sbjct: 364 FDLKIRITEFATSLKQAEAGEYQAYMLEWSGRSDPDGNTYNHLHSGAALNYSAWSNAAAD 423 Query: 432 KLMEDARLINDPVQRKAIYEKMTRIVLNDEPIIYIYHRTLLIAHSTKVEGYRQMPDGLVR 491 K +EDARL++D +RKAIYE++ + DEPI+Y+YHR L A +TK+EG++ MPDGL+R Sbjct: 424 KALEDARLVSDIAKRKAIYERLVKEQQADEPILYLYHRKFLFAQTTKLEGFKPMPDGLLR 483 Query: 492 VVGLKLK 498 VVGLKLK Sbjct: 484 VVGLKLK 490 >ref|YP_001238884.1| putative ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ34978.1| putative ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] Length = 490 Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/487 (76%), Positives = 431/487 (88%) Query: 12 CGTSARAETTLRIGLAEDPDILDPSIGRTYVGRIVFSAFCDKLFDIDEKLNIVPQLALSY 71 CG +A+A+TTLRIGLAED DILDP++ RTYVGRIVF+A CDKLFDIDEKLNIVPQLALS+ Sbjct: 4 CGATAQAQTTLRIGLAEDADILDPTMARTYVGRIVFAAVCDKLFDIDEKLNIVPQLALSH 63 Query: 72 ENSADGKEMTIKLRPGVKFHDGEPFDAEAAKFSLERHLTLPTSFRKPELAALDHVDVVDP 131 E SADGK++TIKLRPGVKFHDGEPFDAEAAKFSL+RHL++P SFRKPE+A+LDHV+VVDP Sbjct: 64 ETSADGKDVTIKLRPGVKFHDGEPFDAEAAKFSLDRHLSMPGSFRKPEIASLDHVEVVDP 123 Query: 132 LTIKLVLKTPYSPLIAQLTDRAGMMVSPKAVKEAGDKFGLHPVCAGPYKFVERVQQDRMV 191 LTIKLVLKTP+SPL+AQLTDRAGMMVSPKA KEAGDKFGL PVCAGPYKFVERVQQDR+V Sbjct: 124 LTIKLVLKTPFSPLLAQLTDRAGMMVSPKAAKEAGDKFGLRPVCAGPYKFVERVQQDRIV 183 Query: 192 FEKFGDYWNKDNVFIDRIVFLPIVDATVRLANLKSGGLDLIERVLATDIKDVRADKRLVL 251 FEKF DYWNKDNVFID+IV+ PIVDATVRLANLKSG LD+IER+LATDIKDV +DKRL L Sbjct: 184 FEKFADYWNKDNVFIDKIVYQPIVDATVRLANLKSGSLDMIERLLATDIKDVTSDKRLKL 243 Query: 252 STAPELGYLGLTINIGNDKSKGPLSQSEKVRQALDLSIDREALNQVVFNGEFTPGNQWVS 311 STA LGY GLTINIG DKSKG LSQS KVRQALDL+IDREALNQV+FNGEF PGNQ+V+ Sbjct: 244 STATSLGYRGLTINIGKDKSKGALSQSAKVRQALDLAIDREALNQVIFNGEFKPGNQFVN 303 Query: 312 PTHPYYQKAFPVRGRDIAKAKALLKEAGVTLPVAIDYMVPKGAENEAVAQVVQSMAAEAG 371 P +PYYQ AFPVRGRD+ KAKALLKEAGVT PVA+D+MV K +E+EA AQV+Q+MAAEAG Sbjct: 304 PENPYYQTAFPVRGRDVEKAKALLKEAGVTPPVAVDFMVSKESESEAAAQVLQAMAAEAG 363 Query: 372 FDIKIRVVEFATTFKQAQAGEFQVFQINWSGRIDPDGNSYVFLHTKAPQNDGGYSNAEAD 431 FD+KIR+ EFAT+ KQA+AGE+Q F + WSGR DPDGN++ LH+ A N +SNA AD Sbjct: 364 FDLKIRITEFATSLKQAEAGEYQAFMLEWSGRSDPDGNAFNHLHSGAALNYSAWSNAAAD 423 Query: 432 KLMEDARLINDPVQRKAIYEKMTRIVLNDEPIIYIYHRTLLIAHSTKVEGYRQMPDGLVR 491 K +EDARL++D +RKAIYE + R DEPI+Y+YHR L A +T++EG++ MPDGL+R Sbjct: 424 KALEDARLVSDMAKRKAIYETLVREQQADEPILYLYHRKFLFAQTTRLEGFKPMPDGLLR 483 Query: 492 VVGLKLK 498 VVGLKLK Sbjct: 484 VVGLKLK 490 >ref|YP_001523693.1| ABC transporter substrate-binding protein [Azorhizobium caulinodans ORS 571] dbj|BAF86775.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] Length = 543 Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust. Identities = 283/495 (57%), Positives = 356/495 (71%), Gaps = 4/495 (0%) Query: 3 VLMAALVTWCGTSARAETTLRIGLAEDPDILDPSIGRTYVGRIVFSAFCDKLFDIDEKLN 62 VL L T S A+T LR GL EDPD LDP++ RT+ GR+VF+A CDKL DID KLN Sbjct: 52 VLSTGLATGLAASVEAQT-LRFGLMEDPDALDPTLARTFSGRMVFAALCDKLVDIDAKLN 110 Query: 63 IVPQLALSYENSADGKEMTIKLRPGVKFHDGEPFDAEAAKFSLERHLTLPTSFRKPELAA 122 I+PQLA + S D K +T+K+R GV F DGE DAEA KF+LERHL + S R+ E+AA Sbjct: 111 IIPQLATEWSWSPDQKTLTMKIRDGVLFQDGEKLDAEAVKFNLERHLKMQGSQRRGEIAA 170 Query: 123 LDHVDVVDPLTIKLVLKTPYSPLIAQLTDRAGMMVSPKAVKEAGDKFGLHPVCAGPYKFV 182 +D V+VVDPLT+K+ LKTP++PL+AQ TDRAGMMVSPKA + GDKF PVCAGP+KFV Sbjct: 171 IDSVEVVDPLTVKINLKTPFAPLLAQFTDRAGMMVSPKAAQALGDKFASAPVCAGPFKFV 230 Query: 183 ERVQQDRMVFEKFGDYWNKDNVFIDRIVFLPIVDATVRLANLKSGGLDLIERVLATDIKD 242 ERV QDR+V EKF +YWNKDN+F+ RI F I D TVRL NL+SG LDL+ER+ TD+ Sbjct: 231 ERVAQDRIVVEKFDNYWNKDNIFLKRIEFKVIPDTTVRLTNLRSGQLDLLERLAPTDLPQ 290 Query: 243 VRADKRLVLSTAPELGYLGLTINIGNDKSKGPLSQSEKVRQALDLSIDREALNQVVFNGE 302 V++D +L + A ELGY L +N+ D GPL+++ KVR+AL+LSIDR+A+NQVVFNGE Sbjct: 291 VQSDSKLKIGMAYELGYQTLLLNLSKD---GPLAKNAKVREALELSIDRDAINQVVFNGE 347 Query: 303 FTPGNQWVSPTHPYYQKAFPVRGRDIAKAKALLKEAGVTLPVAIDYMVPKGAENEAVAQV 362 F PGNQWV+P +P Y AFP+ RD+AKAKALLKEAGVT P+ +++ V ++ AQV Sbjct: 348 FLPGNQWVNPKNPNYVSAFPIPKRDVAKAKALLKEAGVTTPLVVNFTVFSDNLSQQSAQV 407 Query: 363 VQSMAAEAGFDIKIRVVEFATTFKQAQAGEFQVFQINWSGRIDPDGNSYVFLHTKAPQND 422 +Q+MA EAGFD+KI+ +F T A G + + NWSGR DPDGN+Y FL TKAP N Sbjct: 408 IQAMAKEAGFDLKIQATDFGTALNLADQGNYDLMLYNWSGRPDPDGNTYNFLATKAPLNY 467 Query: 423 GGYSNAEADKLMEDARLINDPVQRKAIYEKMTRIVLNDEPIIYIYHRTLLIAHSTKVEGY 482 YSN +AD + R NDP RKA ++ + VL D P+IY+YHR LL A+STK+ G+ Sbjct: 468 PRYSNEKADAAFQAERQNNDPEVRKAAWKDLATQVLADRPLIYLYHRKLLWAYSTKLTGF 527 Query: 483 RQMPDGLVRVVGLKL 497 PDGLVR GLKL Sbjct: 528 GDYPDGLVRFTGLKL 542 >ref|YP_004369070.1| ABC transporter periplasmic protein [Marinithermus hydrothermalis DSM 14884] gb|AEB12960.1| ABC-type transporter, periplasmic subunit [Marinithermus hydrothermalis DSM 14884] Length = 498 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 273/493 (55%), Positives = 346/493 (70%), Gaps = 3/493 (0%) Query: 7 ALVTWCGTSARAETTLRIGLAEDPDILDPSIGRTYVGRIVFSAFCDKLFDIDEKLNIVPQ 66 A V GT A A+T LRIGL DPD+LDP +GRT+VGRIVF++ CDKLFDI L IVPQ Sbjct: 8 AAVLALGTWASAQT-LRIGLVSDPDVLDPDLGRTFVGRIVFASLCDKLFDITPDLEIVPQ 66 Query: 67 LALSYENSADGKEMTIKLRPGVKFHDGEPFDAEAAKFSLERHLTLPTSFRKPELAALDHV 126 LA Y S DG+ +T+ LR GV FHDGEPF+AEA KF++ER LTLP S R+ E+ ++ V Sbjct: 67 LATGYTWSEDGRTLTLTLRQGVTFHDGEPFNAEAVKFNIERSLTLPGSNRRSEIEPIERV 126 Query: 127 DVVDPLTIKLVLKTPYSPLIAQLTDRAGMMVSPKAVKEAGDKFGLHPVCAGPYKFVERVQ 186 +VVD T+++ LKTP+SPLIAQ DRAGMMVSPKA +E G+ FG PVC+GP+KFVERV Sbjct: 127 EVVDAYTVRIHLKTPFSPLIAQFADRAGMMVSPKAARELGENFGRAPVCSGPFKFVERVA 186 Query: 187 QDRMVFEKFGDYWNKDNVFIDRIVFLPIVDATVRLANLKSGGLDLIERVLATDIKDVRAD 246 QDR+V EKF DYWNKD + DR+VFLPI DA+VRLANL+SG LDLIERV TD+ VR D Sbjct: 187 QDRIVLEKFEDYWNKDQIHFDRVVFLPIPDASVRLANLQSGDLDLIERVAPTDLNTVRDD 246 Query: 247 KRLVLSTAPELGYLGLTINIGNDKSKG-PLSQSEKVRQALDLSIDREALNQVVFNGEFTP 305 RL L+ A LGY GLTIN+ N + + PL++ +VR+AL+L++DREA+NQVVFNGEF P Sbjct: 247 PRLELAAAVGLGYQGLTINLANPEPRDTPLAKDPRVREALELALDREAINQVVFNGEFVP 306 Query: 306 GNQWVSPTHPYYQKAFPVRGRDIAKAKALLKEAGVTLPVAIDYMVPKGAENEAVAQVVQS 365 GNQ V PT P+Y + P+ RD+A+A+ LLK AG VA MV ++ + QV+QS Sbjct: 307 GNQPVPPTSPWYIEELPMPKRDVARARELLKAAGYDR-VAFTLMVVNNPQSIQLGQVIQS 365 Query: 366 MAAEAGFDIKIRVVEFATTFKQAQAGEFQVFQINWSGRIDPDGNSYVFLHTKAPQNDGGY 425 MA EAGFDI++ VEFAT +AGE+ FQI WSGRIDPDGN ++F N+ GY Sbjct: 366 MAKEAGFDIQLNAVEFATALDLQEAGEYDAFQIGWSGRIDPDGNIFIFHTCDGALNETGY 425 Query: 426 SNAEADKLMEDARLINDPVQRKAIYEKMTRIVLNDEPIIYIYHRTLLIAHSTKVEGYRQM 485 + E D+L+ AR + +R +Y + L D IIY+YH + +EG+R Sbjct: 426 CDPEVDRLLNAARSASSFEERHELYRQAAERYLPDRHIIYLYHPKWFWGYRADLEGFRPF 485 Query: 486 PDGLVRVVGLKLK 498 PDG++R GLKLK Sbjct: 486 PDGIIRPEGLKLK 498