BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0243.0068.p (266 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769510.1| ABC transporter ATP-binding protein [Bradyrhizo... 461 e-128 gb|ADO77591.1| oligopeptide/dipeptide ABC transporter, ATPase su... 324 1e-86 ref|YP_076653.1| oligopeptide ABC transporter ATP-binding protei... 322 3e-86 emb|CCC58087.1| oligopeptide transport ATP-binding protein OppD ... 322 4e-86 ref|YP_001757018.1| oligopeptide/dipeptide ABC transporter ATPas... 321 6e-86 >ref|NP_769510.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC48135.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 329 Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust. Identities = 228/245 (93%), Positives = 236/245 (96%) Query: 1 MTHAVDSVDLSVANGATLGLVGESGCGKSVTSLAIMGLLPKQSAAVSGAIRFDGFDLLDV 60 +THAVDSVDLSVANGATLGLVGESGCGKSVTSLAIMGLLPKQS +SGAIRFDGFDLL Sbjct: 23 VTHAVDSVDLSVANGATLGLVGESGCGKSVTSLAIMGLLPKQSTEISGAIRFDGFDLLKT 82 Query: 61 PDATLRDLRGNRLAMIFQEPMTSLNPSFTIGDQITETILRHRGGSRRAARERAIELLRRV 120 PD TLRDLRGNRLAMIFQEPMTSLNPSFTIGDQI ETILRHRGGSRR+ARERAIELLRRV Sbjct: 83 PDQTLRDLRGNRLAMIFQEPMTSLNPSFTIGDQIIETILRHRGGSRRSARERAIELLRRV 142 Query: 121 HIPSPEKRIDEFPHKLSGGMRQRVMIAMALACDPQLLIADEPTTALDVTLQAQILDLMRE 180 HIPSPE+R+DE+PHKLSGGMRQRVMIAMALACDP+LLIADEPTTALDVTLQAQIL+LMRE Sbjct: 143 HIPSPERRVDEYPHKLSGGMRQRVMIAMALACDPRLLIADEPTTALDVTLQAQILELMRE 202 Query: 181 LKAASGAAIILITHDLGVVGEVCDEVAVMYAGEIVERAPVDELFANPQHPYTVGLLGSIP 240 LKAASGAAIILITHDLGVV EVCDEVAVMYAGEIVERAPVDELFA PQHPYTVGLLGSIP Sbjct: 203 LKAASGAAIILITHDLGVVAEVCDEVAVMYAGEIVERAPVDELFAAPQHPYTVGLLGSIP 262 Query: 241 RLDRR 245 RLD R Sbjct: 263 RLDHR 267 >gb|ADO77591.1| oligopeptide/dipeptide ABC transporter, ATPase subunit [Halanaerobium praevalens DSM 2228] Length = 343 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 150/245 (61%), Positives = 196/245 (80%), Gaps = 1/245 (0%) Query: 1 MTHAVDSVDLSVANGATLGLVGESGCGKSVTSLAIMGLLPKQSAAVSGA-IRFDGFDLLD 59 + AVD VD + G TLG+VGESGCGKSVTSL+IM L+ ++G I+F G DL Sbjct: 22 VVKAVDGVDYEIYPGETLGIVGESGCGKSVTSLSIMRLVESPPGEIAGGEIKFKGKDLTK 81 Query: 60 VPDATLRDLRGNRLAMIFQEPMTSLNPSFTIGDQITETILRHRGGSRRAARERAIELLRR 119 + + +R +RGN ++MIFQEPMTSLNP +T+GDQI E I+ H+ +R+ A+++AI++L++ Sbjct: 82 ISEKEMRQIRGNDISMIFQEPMTSLNPVYTVGDQIMEAIMLHKKVNRKEAKKQAIDMLQK 141 Query: 120 VHIPSPEKRIDEFPHKLSGGMRQRVMIAMALACDPQLLIADEPTTALDVTLQAQILDLMR 179 V IP PE+R+DE+PH+LSGGMRQRVMIAMAL+CDPQLLIADEPTTALDVT+QAQIL+LM Sbjct: 142 VGIPLPEQRVDEYPHQLSGGMRQRVMIAMALSCDPQLLIADEPTTALDVTIQAQILELMN 201 Query: 180 ELKAASGAAIILITHDLGVVGEVCDEVAVMYAGEIVERAPVDELFANPQHPYTVGLLGSI 239 LK + G +I++ITHDLGV+ EV D VAVMYAG++VE VD LFA+P+HPYT GL+ SI Sbjct: 202 SLKKSYGMSIMMITHDLGVIAEVSDRVAVMYAGKVVEYTDVDTLFADPKHPYTWGLMNSI 261 Query: 240 PRLDR 244 P+LD+ Sbjct: 262 PKLDK 266 >ref|YP_076653.1| oligopeptide ABC transporter ATP-binding protein [Symbiobacterium thermophilum IAM 14863] dbj|BAD41809.1| oligopeptide ABC transporter ATP-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 339 Score = 322 bits (825), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 159/248 (64%), Positives = 193/248 (77%), Gaps = 1/248 (0%) Query: 1 MTHAVDSVDLSVANGATLGLVGESGCGKSVTSLAIMGLLPKQSAA-VSGAIRFDGFDLLD 59 + AVD VDL + G TLG+VGESGCGKSVTSL+IM L+P V G I F+G DLL Sbjct: 29 VVKAVDGVDLYINRGETLGVVGESGCGKSVTSLSIMRLIPNPPGKIVGGEILFEGEDLLK 88 Query: 60 VPDATLRDLRGNRLAMIFQEPMTSLNPSFTIGDQITETILRHRGGSRRAARERAIELLRR 119 +A +R +RGN ++MIFQEPMTSLNP +TIGDQI E I H+G S + A E+AIE+LR Sbjct: 89 KSEAEMRKIRGNEISMIFQEPMTSLNPVYTIGDQIAEAIELHQGLSHKEAIEKAIEMLRL 148 Query: 120 VHIPSPEKRIDEFPHKLSGGMRQRVMIAMALACDPQLLIADEPTTALDVTLQAQILDLMR 179 V IP PE+R+ E+PH+LSGGMRQRVMIAMAL+C+P+LLIADEPTTALDVT+QAQIL+LM+ Sbjct: 149 VGIPLPEQRVKEYPHQLSGGMRQRVMIAMALSCNPKLLIADEPTTALDVTIQAQILELMK 208 Query: 180 ELKAASGAAIILITHDLGVVGEVCDEVAVMYAGEIVERAPVDELFANPQHPYTVGLLGSI 239 +LK G AI+LITHDLGVV E+C+ V VMYAG++VE A LF NP HPYT GLL SI Sbjct: 209 KLKKELGMAIMLITHDLGVVAEMCERVVVMYAGKVVEEADAVALFQNPLHPYTEGLLKSI 268 Query: 240 PRLDRRLS 247 PRLD+ + Sbjct: 269 PRLDQEVE 276 >emb|CCC58087.1| oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) [Caloramator australicus RC3] Length = 330 Score = 322 bits (825), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 148/244 (60%), Positives = 193/244 (79%), Gaps = 2/244 (0%) Query: 4 AVDSVDLSVANGATLGLVGESGCGKSVTSLAIMGLLPKQSAAV--SGAIRFDGFDLLDVP 61 AVD VD + G TLG+VGESGCGKS+TS++IM L+P + I FDG +LL++P Sbjct: 23 AVDGVDFYIKPGETLGVVGESGCGKSITSMSIMRLIPNPPGKIMEGSEIWFDGVNLLNLP 82 Query: 62 DATLRDLRGNRLAMIFQEPMTSLNPSFTIGDQITETILRHRGGSRRAARERAIELLRRVH 121 + +R +RGN+++MIFQEPMTSLNP + +GDQI+E ++ H+ S++ A E+AIE+L+ V+ Sbjct: 83 EKEMRSIRGNKISMIFQEPMTSLNPVYKVGDQISEALILHQKMSKKDAWEKAIEMLKLVN 142 Query: 122 IPSPEKRIDEFPHKLSGGMRQRVMIAMALACDPQLLIADEPTTALDVTLQAQILDLMREL 181 IPSPEK ++EFPH LSGGMRQRVMIAMALAC+P+LLIADEPTTALDVT+QAQILDLM EL Sbjct: 143 IPSPEKVVNEFPHTLSGGMRQRVMIAMALACNPKLLIADEPTTALDVTVQAQILDLMNEL 202 Query: 182 KAASGAAIILITHDLGVVGEVCDEVAVMYAGEIVERAPVDELFANPQHPYTVGLLGSIPR 241 K AA+++ITH+LGVV E C+ V VMYAG++VE V+E+F NP HPYT GLL SIP Sbjct: 203 KKKVNAAVMMITHNLGVVAETCNRVVVMYAGQVVEEGGVEEIFENPLHPYTKGLLNSIPD 262 Query: 242 LDRR 245 ++ + Sbjct: 263 VNGK 266 >ref|YP_001757018.1| oligopeptide/dipeptide ABC transporter ATPase [Methylobacterium radiotolerans JCM 2831] gb|ACB26335.1| oligopeptide/dipeptide ABC transporter, ATPase subunit [Methylobacterium radiotolerans JCM 2831] Length = 336 Score = 321 bits (823), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 154/242 (63%), Positives = 197/242 (81%) Query: 1 MTHAVDSVDLSVANGATLGLVGESGCGKSVTSLAIMGLLPKQSAAVSGAIRFDGFDLLDV 60 + AVD V ++ +G TL +VGESGCGKSVTS++I+ LLP+ A ++GAI+F+G +LLD+ Sbjct: 26 VNRAVDGVSFAIQSGETLAIVGESGCGKSVTSMSILRLLPEPPARIAGAIKFEGRNLLDL 85 Query: 61 PDATLRDLRGNRLAMIFQEPMTSLNPSFTIGDQITETILRHRGGSRRAARERAIELLRRV 120 P++ +R +RGN +++IFQEPMTSLNP T+G QI ET+ H+G RR A ERA+E+L V Sbjct: 86 PNSAMRKIRGNDISVIFQEPMTSLNPVLTVGRQIGETLRLHQGLGRREAEERAVEMLTLV 145 Query: 121 HIPSPEKRIDEFPHKLSGGMRQRVMIAMALACDPQLLIADEPTTALDVTLQAQILDLMRE 180 IP P +R+ E+PH+LSGGMRQRVMIA+ALAC P+LLIADEPTTALDVT+QAQILDLMR+ Sbjct: 146 GIPEPRRRVREYPHQLSGGMRQRVMIAIALACSPKLLIADEPTTALDVTIQAQILDLMRD 205 Query: 181 LKAASGAAIILITHDLGVVGEVCDEVAVMYAGEIVERAPVDELFANPQHPYTVGLLGSIP 240 LKA GAAI+LITHDLGVV EV D V VMYAG VE APV +LF +P+HPYT GL+G++P Sbjct: 206 LKARVGAAIMLITHDLGVVAEVADRVVVMYAGRKVEEAPVRDLFRSPRHPYTRGLMGAVP 265 Query: 241 RL 242 +L Sbjct: 266 KL 267