BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0243.0065.p (330 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769513.1| ABC transporter ATP-binding protein [Bradyrhizo... 592 e-167 ref|YP_001204566.1| putative ATP-binding protein of oligopeptide... 572 e-161 ref|YP_568948.1| oligopeptide/dipeptide ABC transporter ATP-bind... 569 e-160 ref|YP_001238887.1| putative oligopeptide ABC transporter ATP-bi... 567 e-160 ref|YP_001757127.1| oligopeptide/dipeptide ABC transporter ATPas... 486 e-135 >ref|NP_769513.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC48138.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 329 Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust. Identities = 288/330 (87%), Positives = 309/330 (93%), Gaps = 1/330 (0%) Query: 1 MSGTLIEVRNLRRVFDVSKPWLNRVIEGGHLEFLKAVDGVSFDIKRGETFALVGESGSGK 60 MS ++ NLRRVFDVSKPWLNRV+EGGHLE+LKAVD V+FDI++GETFALVGESGSGK Sbjct: 1 MSAPFVQATNLRRVFDVSKPWLNRVLEGGHLEYLKAVDNVTFDIRKGETFALVGESGSGK 60 Query: 61 TTVARMVVGLLPPSSGEVVIDGVSMTDPRQGQARRRLRRRIQMVFQDPYASLNPRYRVAA 120 TTVARMVVGLLPPSSG+V IDGVSM DPRQ ARR+LRRRIQM+FQDPYASLNPR+RV A Sbjct: 61 TTVARMVVGLLPPSSGDVQIDGVSMGDPRQAPARRKLRRRIQMIFQDPYASLNPRFRVDA 120 Query: 121 IIAEPIRAFDLIQGERDIKARVGELLSLVGLHPDDGQKFPHEFSGGQRQRVAIARALASE 180 II+EPIRAFDLIQGERDI+ARVGELLSLVGLHPDD KFPHEFSGGQRQR+AIARALAS+ Sbjct: 121 IISEPIRAFDLIQGERDIQARVGELLSLVGLHPDDRLKFPHEFSGGQRQRIAIARALASD 180 Query: 181 AEFIVCDEPTSALDVSVQAQILNLMRDLQDKFGLTYLFISHNLAVVRHMASRIGVMYLGR 240 AEFIVCDEPTSALDVSVQAQILNLMRDLQDKFGLTY+FISHNLAVVRHMASR+GVMYLGR Sbjct: 181 AEFIVCDEPTSALDVSVQAQILNLMRDLQDKFGLTYMFISHNLAVVRHMASRVGVMYLGR 240 Query: 241 IVEIAEGRELFENPRMPYTKMLLGAVPDLAMSGRQRIPVKGEIPNPIDPPQGCSFNPRCP 300 IVEIAEGRELF PRMPYTKMLLGAVPDLAMSGRQRIPVKGEIPNPI PP GC+FNPRCP Sbjct: 241 IVEIAEGRELFARPRMPYTKMLLGAVPDLAMSGRQRIPVKGEIPNPIHPPPGCAFNPRCP 300 Query: 301 LAFDLCRQKTPELIDGVACHAVNSPAAVPA 330 LAFDLCR++ PELI GVACHAVN+ A VPA Sbjct: 301 LAFDLCRKEAPELIGGVACHAVNT-APVPA 329 >ref|YP_001204566.1| putative ATP-binding protein of oligopeptide ABC transporter [Bradyrhizobium sp. ORS 278] emb|CAL76329.1| putative ATP-binding protein of oligopeptide ABC transporter [Bradyrhizobium sp. ORS 278] Length = 323 Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust. Identities = 277/315 (87%), Positives = 295/315 (93%) Query: 14 VFDVSKPWLNRVIEGGHLEFLKAVDGVSFDIKRGETFALVGESGSGKTTVARMVVGLLPP 73 +FDVSKPWLNRVIE EFLKAVDGVSF I++GETFALVGESGSGKTTVARMVVGLL P Sbjct: 1 MFDVSKPWLNRVIERQPQEFLKAVDGVSFGIRKGETFALVGESGSGKTTVARMVVGLLAP 60 Query: 74 SSGEVVIDGVSMTDPRQGQARRRLRRRIQMVFQDPYASLNPRYRVAAIIAEPIRAFDLIQ 133 +SGEV+IDGVSMTD RQG ARR+LRRRIQMVFQDPYASLNPR+RV +IIAEPIRAF++I Sbjct: 61 TSGEVIIDGVSMTDARQGAARRKLRRRIQMVFQDPYASLNPRFRVDSIIAEPIRAFNVID 120 Query: 134 GERDIKARVGELLSLVGLHPDDGQKFPHEFSGGQRQRVAIARALASEAEFIVCDEPTSAL 193 GER IK RVGELL+LVGLHPDDGQKFPHEFSGGQRQR+AIARALASEA+FIVCDEPTSAL Sbjct: 121 GERQIKDRVGELLTLVGLHPDDGQKFPHEFSGGQRQRIAIARALASEADFIVCDEPTSAL 180 Query: 194 DVSVQAQILNLMRDLQDKFGLTYLFISHNLAVVRHMASRIGVMYLGRIVEIAEGRELFEN 253 DVSVQAQILNLMRDLQDKFGLTYLFISHNLAVVRHMASRIGVMYLGRIVEIAEGR LF + Sbjct: 181 DVSVQAQILNLMRDLQDKFGLTYLFISHNLAVVRHMASRIGVMYLGRIVEIAEGRALFND 240 Query: 254 PRMPYTKMLLGAVPDLAMSGRQRIPVKGEIPNPIDPPQGCSFNPRCPLAFDLCRQKTPEL 313 PRMPYTKMLLGAVPDL+MSGRQRIPVKGEIPNPI+PP GC+FNPRCPLAFDLCRQ+ P L Sbjct: 241 PRMPYTKMLLGAVPDLSMSGRQRIPVKGEIPNPINPPSGCTFNPRCPLAFDLCRQEAPAL 300 Query: 314 IDGVACHAVNSPAAV 328 I GVACHAVN PAA Sbjct: 301 IGGVACHAVNQPAAT 315 >ref|YP_568948.1| oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein [Rhodopseudomonas palustris BisB5] gb|ABE39047.1| Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like [Rhodopseudomonas palustris BisB5] Length = 324 Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust. Identities = 276/324 (85%), Positives = 296/324 (91%) Query: 1 MSGTLIEVRNLRRVFDVSKPWLNRVIEGGHLEFLKAVDGVSFDIKRGETFALVGESGSGK 60 MS L+EVR+LR+VFDVSKPWLNRVIEGG E+LKAVDGVSF+I RGETFALVGESGSGK Sbjct: 1 MSAALVEVRHLRQVFDVSKPWLNRVIEGGKPEYLKAVDGVSFEIARGETFALVGESGSGK 60 Query: 61 TTVARMVVGLLPPSSGEVVIDGVSMTDPRQGQARRRLRRRIQMVFQDPYASLNPRYRVAA 120 TTVARMVVGLL P+SG V IDGVSM+D Q ARR+LRRRIQM+FQDPYASLNPR RV A Sbjct: 61 TTVARMVVGLLQPTSGHVTIDGVSMSDTAQAGARRKLRRRIQMIFQDPYASLNPRMRVDA 120 Query: 121 IIAEPIRAFDLIQGERDIKARVGELLSLVGLHPDDGQKFPHEFSGGQRQRVAIARALASE 180 IIAEPIRAFDLIQG DI+ RVGELL LVGLHPDDG K+PH+FSGGQRQR+AIARALASE Sbjct: 121 IIAEPIRAFDLIQGSNDIRGRVGELLQLVGLHPDDGLKYPHQFSGGQRQRIAIARALASE 180 Query: 181 AEFIVCDEPTSALDVSVQAQILNLMRDLQDKFGLTYLFISHNLAVVRHMASRIGVMYLGR 240 A+FIVCDEPTSALDVSVQAQILNLMRDLQD+ GLTYLFISHNLAVVRHMASRIGVMYLGR Sbjct: 181 ADFIVCDEPTSALDVSVQAQILNLMRDLQDRLGLTYLFISHNLAVVRHMASRIGVMYLGR 240 Query: 241 IVEIAEGRELFENPRMPYTKMLLGAVPDLAMSGRQRIPVKGEIPNPIDPPQGCSFNPRCP 300 IVEIAEGRELF P+MPYT+MLLGAVPDLAMSGRQRIPVKGEIPNPIDPP GC+F+PRCP Sbjct: 241 IVEIAEGRELFSRPQMPYTRMLLGAVPDLAMSGRQRIPVKGEIPNPIDPPTGCAFHPRCP 300 Query: 301 LAFDLCRQKTPELIDGVACHAVNS 324 AFD CR + PELIDGVACHAVN Sbjct: 301 EAFDRCRAERPELIDGVACHAVNK 324 >ref|YP_001238887.1| putative oligopeptide ABC transporter ATP-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ34981.1| putative ATP-binding protein of oligopeptide ABC transporter [Bradyrhizobium sp. BTAi1] Length = 323 Score = 567 bits (1461), Expect = e-160, Method: Compositional matrix adjust. Identities = 275/319 (86%), Positives = 296/319 (92%), Gaps = 2/319 (0%) Query: 14 VFDVSKPWLNRVIEGGHLEFLKAVDGVSFDIKRGETFALVGESGSGKTTVARMVVGLLPP 73 +FDVSKPWLNRVIE EFLKAVDGVSF I++GETFALVGESGSGKTTVARMVVGLL P Sbjct: 1 MFDVSKPWLNRVIERQPQEFLKAVDGVSFGIRKGETFALVGESGSGKTTVARMVVGLLAP 60 Query: 74 SSGEVVIDGVSMTDPRQGQARRRLRRRIQMVFQDPYASLNPRYRVAAIIAEPIRAFDLIQ 133 +SGEV+IDGVSM++ RQ Q RR+LRRRIQMVFQDPYASLNPR+RV +IIAEPIRAF++I+ Sbjct: 61 TSGEVIIDGVSMSEARQAQVRRKLRRRIQMVFQDPYASLNPRFRVDSIIAEPIRAFNVIE 120 Query: 134 GERDIKARVGELLSLVGLHPDDGQKFPHEFSGGQRQRVAIARALASEAEFIVCDEPTSAL 193 GER IK RVGELL+LVGLHPDDGQKFPHEFSGGQRQRVAIARALASEA+FIVCDEPTSAL Sbjct: 121 GERQIKDRVGELLTLVGLHPDDGQKFPHEFSGGQRQRVAIARALASEADFIVCDEPTSAL 180 Query: 194 DVSVQAQILNLMRDLQDKFGLTYLFISHNLAVVRHMASRIGVMYLGRIVEIAEGRELFEN 253 DVSVQAQILNLMRDLQDKFGLTYLFISHNLAVVRHMASRIGVMYLGRIVEIAEGR LF + Sbjct: 181 DVSVQAQILNLMRDLQDKFGLTYLFISHNLAVVRHMASRIGVMYLGRIVEIAEGRTLFND 240 Query: 254 PRMPYTKMLLGAVPDLAMSGRQRIPVKGEIPNPIDPPQGCSFNPRCPLAFDLCRQKTPEL 313 PRMPYTKMLLGAVPDL+MSGRQRIPVKGEIPNPI+PP GC+FNPRCP+AFDLCRQ+ PEL Sbjct: 241 PRMPYTKMLLGAVPDLSMSGRQRIPVKGEIPNPINPPSGCTFNPRCPMAFDLCRQQAPEL 300 Query: 314 IDGVACHAVNSP--AAVPA 330 I GVACH VN P AVP Sbjct: 301 IGGVACHVVNQPVTTAVPT 319 >ref|YP_001757127.1| oligopeptide/dipeptide ABC transporter ATPase [Methylobacterium radiotolerans JCM 2831] gb|ACB26444.1| oligopeptide/dipeptide ABC transporter, ATPase subunit [Methylobacterium radiotolerans JCM 2831] Length = 326 Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust. Identities = 245/318 (77%), Positives = 275/318 (86%) Query: 6 IEVRNLRRVFDVSKPWLNRVIEGGHLEFLKAVDGVSFDIKRGETFALVGESGSGKTTVAR 65 +EV +LRR FDVSKPWLNRVIE +FL AVD V F I++GETFA+VGESGSGK+TVAR Sbjct: 5 VEVTDLRRRFDVSKPWLNRVIEREPRKFLTAVDRVGFAIEKGETFAIVGESGSGKSTVAR 64 Query: 66 MVVGLLPPSSGEVVIDGVSMTDPRQGQARRRLRRRIQMVFQDPYASLNPRYRVAAIIAEP 125 MVVGLLPPS+GEV I GVSMTDPRQ ARRRLR RIQM+FQDPYAS+NPR+RV IIAEP Sbjct: 65 MVVGLLPPSAGEVTITGVSMTDPRQAAARRRLRARIQMIFQDPYASMNPRWRVGKIIAEP 124 Query: 126 IRAFDLIQGERDIKARVGELLSLVGLHPDDGQKFPHEFSGGQRQRVAIARALASEAEFIV 185 IRAF+LI GE I+ARV ELL LVGLH DD +K+PHEFSGGQRQRVAIARALAS+AEF+V Sbjct: 125 IRAFNLIHGEGAIRARVSELLGLVGLHADDARKYPHEFSGGQRQRVAIARALASQAEFLV 184 Query: 186 CDEPTSALDVSVQAQILNLMRDLQDKFGLTYLFISHNLAVVRHMASRIGVMYLGRIVEIA 245 DEPTSALDVSVQAQILNLMRDLQD+ GLTYLFISHNLAVVRHMA+R+GVMYLGR+VE+A Sbjct: 185 GDEPTSALDVSVQAQILNLMRDLQDRLGLTYLFISHNLAVVRHMATRVGVMYLGRLVEVA 244 Query: 246 EGRELFENPRMPYTKMLLGAVPDLAMSGRQRIPVKGEIPNPIDPPQGCSFNPRCPLAFDL 305 ++LF PR PYT+MLL AVPDLA GR R+PV GEIPNPIDPP GC+F+PRCPLA D Sbjct: 245 SAKDLFATPRHPYTRMLLDAVPDLAHVGRARVPVSGEIPNPIDPPPGCTFHPRCPLANDR 304 Query: 306 CRQKTPELIDGVACHAVN 323 CR + P L+DGVACHAV Sbjct: 305 CRTEVPALLDGVACHAVQ 322