BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0243.0044.p         (158 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001204575.1| hypothetical protein BRADO2517 [Bradyrhizobi...   221   3e-56
ref|YP_001238896.1| hypothetical protein BBta_2863 [Bradyrhizobi...   220   6e-56
ref|YP_531539.1| phasin 2 [Rhodopseudomonas palustris BisB18] >g...   218   3e-55
ref|YP_780614.1| phasin 2 [Rhodopseudomonas palustris BisA53] >g...   213   1e-53
ref|ZP_08629152.1| hypothetical protein CSIRO_2239 [Bradyrhizobi...   211   3e-53

>ref|YP_001204575.1| hypothetical protein BRADO2517 [Bradyrhizobium sp. ORS 278]
 emb|CAL76338.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 158

 Score =  221 bits (563), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 111/158 (70%), Positives = 131/158 (82%)

Query: 1   MTTETNSVLNSVKEAFAPVTEAFTKLQNLEVPEAAREFVKKQAEAAKTRAADAYAGSEKV 60
           MTTETN+V ++VK+AFAPVT+AF  LQ +EVPE+AREFVKK A  AK RAA+A AGSEKV
Sbjct: 1   MTTETNTVFDTVKDAFAPVTDAFKNLQTMEVPESAREFVKKTASTAKERAAEALAGSEKV 60

Query: 61  TNVIESAVAGSVTEAAKISRNIQQAIYQDAEAFFAGIDKLASAKSLGEAAQIQSELARAH 120
           T+ IE+AV   VTEA KI+RNIQQA+YQD EAFF G+DKLASAKS+ EA  IQ ELARA 
Sbjct: 61  TSAIETAVFDGVTEAGKITRNIQQALYQDTEAFFDGLDKLASAKSISEAVAIQGELARAR 120

Query: 121 GEQFVSRAKATTEYLGKLVTDGAKTAQDNFAKVYGKTA 158
           GE  V+RAK+T+EY+GKLVT+GAK AQ+N AK Y KTA
Sbjct: 121 GEALVARAKSTSEYVGKLVTEGAKLAQENMAKAYNKTA 158


>ref|YP_001238896.1| hypothetical protein BBta_2863 [Bradyrhizobium sp. BTAi1]
 gb|ABQ34990.1| hypothetical protein BBta_2863 [Bradyrhizobium sp. BTAi1]
          Length = 157

 Score =  220 bits (560), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 111/156 (71%), Positives = 130/156 (83%)

Query: 3   TETNSVLNSVKEAFAPVTEAFTKLQNLEVPEAAREFVKKQAEAAKTRAADAYAGSEKVTN 62
           +ETN+V ++VK+AFAPVT+AF  LQ +EVPE+AREFVKK A  AK RAA+A AGSEKVT+
Sbjct: 2   SETNTVFDTVKDAFAPVTDAFKNLQTMEVPESAREFVKKTASTAKERAAEALAGSEKVTS 61

Query: 63  VIESAVAGSVTEAAKISRNIQQAIYQDAEAFFAGIDKLASAKSLGEAAQIQSELARAHGE 122
            IE+AV   VTEA KISRNIQQA+YQD EAFF GID+LASAKSL EA QIQ ELARA GE
Sbjct: 62  AIETAVFDGVTEAGKISRNIQQALYQDTEAFFDGIDRLASAKSLSEAVQIQGELARARGE 121

Query: 123 QFVSRAKATTEYLGKLVTDGAKTAQDNFAKVYGKTA 158
             V+RAK+T+EY+GKLVT+GAK AQ+N AK Y KTA
Sbjct: 122 ALVARAKSTSEYVGKLVTEGAKLAQENMAKAYNKTA 157


>ref|YP_531539.1| phasin 2 [Rhodopseudomonas palustris BisB18]
 gb|ABD87220.1| Phasin 2 [Rhodopseudomonas palustris BisB18]
          Length = 169

 Score =  218 bits (555), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 108/157 (68%), Positives = 126/157 (80%)

Query: 2   TTETNSVLNSVKEAFAPVTEAFTKLQNLEVPEAAREFVKKQAEAAKTRAADAYAGSEKVT 61
           T    +VL+SV +AF PVT+A   +QNL+VPEA R+FVK+ A  AK +AAD +AGSEKVT
Sbjct: 13  TQSDTAVLDSVNQAFTPVTDALKNIQNLDVPEATRDFVKRAAGTAKEKAADIHAGSEKVT 72

Query: 62  NVIESAVAGSVTEAAKISRNIQQAIYQDAEAFFAGIDKLASAKSLGEAAQIQSELARAHG 121
            VIESAV+ SV EAAKISRNIQ AIYQDAEAFFAGIDKLASAKS+ E  QIQS+L R+ G
Sbjct: 73  AVIESAVSNSVAEAAKISRNIQHAIYQDAEAFFAGIDKLASAKSVNEVVQIQSDLVRSQG 132

Query: 122 EQFVSRAKATTEYLGKLVTDGAKTAQDNFAKVYGKTA 158
           E  +SRAK+ TEYLG+LVTD A+TAQDN  KVY KTA
Sbjct: 133 EVLISRAKSATEYLGRLVTDSARTAQDNLDKVYSKTA 169


>ref|YP_780614.1| phasin 2 [Rhodopseudomonas palustris BisA53]
 gb|ABJ05634.1| phasin [Rhodopseudomonas palustris BisA53]
          Length = 165

 Score =  213 bits (541), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 103/152 (67%), Positives = 124/152 (81%)

Query: 7   SVLNSVKEAFAPVTEAFTKLQNLEVPEAAREFVKKQAEAAKTRAADAYAGSEKVTNVIES 66
           SV +SVK+AF PV EAF  +QNLEVPEA R+F K+ A   K + AD +AG+EKVT  IE+
Sbjct: 14  SVNDSVKQAFTPVNEAFKNMQNLEVPEATRDFFKRTANTGKEKVADIHAGTEKVTTAIET 73

Query: 67  AVAGSVTEAAKISRNIQQAIYQDAEAFFAGIDKLASAKSLGEAAQIQSELARAHGEQFVS 126
           AV+ SV EAAKI+RNIQQA YQDAEAFF+GID+LASAKS+ EA QIQS+L RA GE F++
Sbjct: 74  AVSSSVAEAAKITRNIQQAFYQDAEAFFSGIDRLASAKSINEAVQIQSDLVRAQGEVFLA 133

Query: 127 RAKATTEYLGKLVTDGAKTAQDNFAKVYGKTA 158
           RAK++TEYLG+LVTD AKTAQDN  KVY K+A
Sbjct: 134 RAKSSTEYLGRLVTDSAKTAQDNLTKVYSKSA 165


>ref|ZP_08629152.1| hypothetical protein CSIRO_2239 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP08511.1| hypothetical protein CSIRO_2239 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 162

 Score =  211 bits (537), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 112/162 (69%), Positives = 129/162 (79%), Gaps = 4/162 (2%)

Query: 1   MTTETN--SVLNSVKEAFAPVTEAFTKLQNLEVPEAAREFVKKQAEAAKTRAADAYAGSE 58
           MT   N  SVLN+VK AFAPVT+A     N+EVPEAAREFVKK A  A+ RA + + GSE
Sbjct: 1   MTNSFNAESVLNTVKTAFAPVTDALKNFPNVEVPEAAREFVKKAAGNAQVRATEIHNGSE 60

Query: 59  KVTNVIESAVAGSVTEAAKISRNIQQAIYQDAEAFFAGIDKLASAKSLGEAAQIQSELAR 118
           KVT+ IE+A AGSV+E AKISRNIQQA+Y+DA+A FAGIDKLASAKSL EA  IQ++L R
Sbjct: 61  KVTSAIETAAAGSVSETAKISRNIQQAMYEDAQALFAGIDKLASAKSLNEAVSIQNDLLR 120

Query: 119 AHGEQFVSRAKATTEYLGKLVTDGAKTAQDNFAKV--YGKTA 158
           A GE  V+RAKATTEYLGKL+ DGAKTAQDNFAKV  Y K+A
Sbjct: 121 AQGEVVVARAKATTEYLGKLIADGAKTAQDNFAKVTSYAKSA 162