BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0243.0037.p (258 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769533.1| phenylacetic acid degradation protein [Bradyrhi... 452 e-125 ref|YP_001204579.1| phenylacetic acid degradation protein paaC [... 437 e-121 ref|YP_001238900.1| phenylacetic acid degradation protein paaC [... 436 e-120 ref|ZP_08630014.1| phenylacetate-CoA oxygenase, PaaI subunit [Br... 425 e-117 ref|YP_530580.1| phenylacetate-CoA oxygenase subunit PaaI [Rhodo... 424 e-117 >ref|NP_769533.1| phenylacetic acid degradation protein [Bradyrhizobium japonicum USDA 110] dbj|BAC48158.1| paaC [Bradyrhizobium japonicum USDA 110] Length = 259 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 212/258 (82%), Positives = 235/258 (91%) Query: 1 MATANIEVSETPLVLYALRRADDALILGHRLSEWCGHAPALEEDMALANMGLDLLGQARE 60 M AN +VSETPLVLYALRRADDALILGHRLSEWCGHAP LEEDMAL+N+ LDL+GQARE Sbjct: 2 MPVANTQVSETPLVLYALRRADDALILGHRLSEWCGHAPMLEEDMALSNIALDLIGQARE 61 Query: 61 LYSYAAKVEGKDNDEDKFAYLRDVRQYRNLLLVEQPNGDFARTMVRQFFYAAFADLYWRA 120 LY+YAAK EGK+NDEDK AYLRDVRQYRNLLLVEQPNGDFA+T+VRQFFY+AFADLYWRA Sbjct: 62 LYTYAAKAEGKENDEDKLAYLRDVRQYRNLLLVEQPNGDFAQTLVRQFFYSAFADLYWRA 121 Query: 121 MMASSDPTLAAIAAKSEKESAYHVRHSSEWIVRLGDGTEESHRRAQGAIDDLWAYTGEMF 180 MM S D TLAAIAAKSEKESAYH+RH+SEWI+RLGDGT+ESHRRAQ AID LWA+TGEMF Sbjct: 122 MMTSRDTTLAAIAAKSEKESAYHLRHASEWIIRLGDGTDESHRRAQAAIDHLWAFTGEMF 181 Query: 181 AVDDGERGLIDAGIAIDPAALQPRWLKTVTGIINEATLSLPKSDWMQQGGRSGSHSEHLG 240 AVDDGER LI AGIA+DP L+ RWLK ++ +++EATL LP++DWMQQGGR G HSEHLG Sbjct: 182 AVDDGERALIHAGIAVDPGILRGRWLKMLSDVVSEATLELPQNDWMQQGGRVGRHSEHLG 241 Query: 241 HLLSELQSMQRTFPGATW 258 HLLSELQSMQRTFPG TW Sbjct: 242 HLLSELQSMQRTFPGQTW 259 >ref|YP_001204579.1| phenylacetic acid degradation protein paaC [Bradyrhizobium sp. ORS 278] emb|CAL76342.1| Phenylacetic acid degradation protein paaC [Bradyrhizobium sp. ORS 278] Length = 258 Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust. Identities = 205/258 (79%), Positives = 226/258 (87%) Query: 1 MATANIEVSETPLVLYALRRADDALILGHRLSEWCGHAPALEEDMALANMGLDLLGQARE 60 M +I VSETPLVLY LRRADDALILGHRLSEWCGHAP LEEDMAL+NM LDL+GQARE Sbjct: 1 MTAPSITVSETPLVLYTLRRADDALILGHRLSEWCGHAPMLEEDMALSNMALDLIGQARE 60 Query: 61 LYSYAAKVEGKDNDEDKFAYLRDVRQYRNLLLVEQPNGDFARTMVRQFFYAAFADLYWRA 120 LY YAAKVE +DNDEDK AYLRDVRQYRNLLLVE+PNGDFA+TMVRQ FYAAFAD YWR Sbjct: 61 LYGYAAKVEARDNDEDKLAYLRDVRQYRNLLLVERPNGDFAQTMVRQLFYAAFADAYWRG 120 Query: 121 MMASSDPTLAAIAAKSEKESAYHVRHSSEWIVRLGDGTEESHRRAQGAIDDLWAYTGEMF 180 MM S+D TLAAIAAKSEKE AYH+RH+SEW++RLGDGT+ESH RAQ A+DDLWAYTGEMF Sbjct: 121 MMGSTDATLAAIAAKSEKECAYHLRHASEWVIRLGDGTDESHARAQAAVDDLWAYTGEMF 180 Query: 181 AVDDGERGLIDAGIAIDPAALQPRWLKTVTGIINEATLSLPKSDWMQQGGRSGSHSEHLG 240 +VD+ ERGLIDAGIAIDP L P WL V+ + EATL LP++DWMQQGGR G HSEHLG Sbjct: 181 SVDEAERGLIDAGIAIDPTMLMPEWLSIVSRVAREATLVLPENDWMQQGGRDGRHSEHLG 240 Query: 241 HLLSELQSMQRTFPGATW 258 HLLS+LQ MQR+FPGATW Sbjct: 241 HLLSDLQYMQRSFPGATW 258 >ref|YP_001238900.1| phenylacetic acid degradation protein paaC [Bradyrhizobium sp. BTAi1] gb|ABQ34994.1| Phenylacetic acid degradation protein paaC [Bradyrhizobium sp. BTAi1] Length = 258 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 206/258 (79%), Positives = 225/258 (87%) Query: 1 MATANIEVSETPLVLYALRRADDALILGHRLSEWCGHAPALEEDMALANMGLDLLGQARE 60 M +I VSETPLVLY LRRADDALILGHRLSEWCGHAP LEEDMAL+NM LDL+GQARE Sbjct: 1 MTAPSIIVSETPLVLYTLRRADDALILGHRLSEWCGHAPMLEEDMALSNMALDLIGQARE 60 Query: 61 LYSYAAKVEGKDNDEDKFAYLRDVRQYRNLLLVEQPNGDFARTMVRQFFYAAFADLYWRA 120 LY YAAKVEG+ NDEDK AYLRDVRQYRNLLLVE+PNGDFA TMVRQ FYAAFADLYWR Sbjct: 61 LYGYAAKVEGRGNDEDKLAYLRDVRQYRNLLLVERPNGDFAHTMVRQLFYAAFADLYWRG 120 Query: 121 MMASSDPTLAAIAAKSEKESAYHVRHSSEWIVRLGDGTEESHRRAQGAIDDLWAYTGEMF 180 MM S+D TLAAIAAKSEKESAYH+RH+SEW++RLGDGT+ESH R Q A+DDLWAYTGEMF Sbjct: 121 MMGSTDATLAAIAAKSEKESAYHLRHASEWVIRLGDGTDESHARVQVAVDDLWAYTGEMF 180 Query: 181 AVDDGERGLIDAGIAIDPAALQPRWLKTVTGIINEATLSLPKSDWMQQGGRSGSHSEHLG 240 DD ERGLIDAG+AIDP L P WL V+ + EATL+LP++DWMQQGGR G HSEHLG Sbjct: 181 GADDAERGLIDAGVAIDPTMLLPEWLSIVSHVAREATLTLPENDWMQQGGRDGRHSEHLG 240 Query: 241 HLLSELQSMQRTFPGATW 258 HLLSELQ MQR+FPGATW Sbjct: 241 HLLSELQYMQRSFPGATW 258 >ref|ZP_08630014.1| phenylacetate-CoA oxygenase, PaaI subunit [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07383.1| phenylacetate-CoA oxygenase, PaaI subunit [Bradyrhizobiaceae bacterium SG-6C] Length = 260 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 198/258 (76%), Positives = 227/258 (87%) Query: 1 MATANIEVSETPLVLYALRRADDALILGHRLSEWCGHAPALEEDMALANMGLDLLGQARE 60 MAT +I ++E+PLVLYALRRADDALILGHR+SEWCGHAP LEEDMALANMGLDL+GQARE Sbjct: 3 MATPSINITESPLVLYALRRADDALILGHRVSEWCGHAPMLEEDMALANMGLDLIGQARE 62 Query: 61 LYSYAAKVEGKDNDEDKFAYLRDVRQYRNLLLVEQPNGDFARTMVRQFFYAAFADLYWRA 120 LY+YA +VEG +DEDK AYLRDVRQYRNLLLVEQPNGDFART+VRQFFY+AFADLYWRA Sbjct: 63 LYTYAGQVEGAGHDEDKLAYLRDVRQYRNLLLVEQPNGDFARTIVRQFFYSAFADLYWRA 122 Query: 121 MMASSDPTLAAIAAKSEKESAYHVRHSSEWIVRLGDGTEESHRRAQGAIDDLWAYTGEMF 180 MM S D TLAAIAAKSEKESAYH+RH+SEW++RLGDGT ESHRRAQ AIDDLWA+TGE+F Sbjct: 123 MMNSKDATLAAIAAKSEKESAYHLRHTSEWMIRLGDGTAESHRRAQTAIDDLWAFTGELF 182 Query: 181 AVDDGERGLIDAGIAIDPAALQPRWLKTVTGIINEATLSLPKSDWMQQGGRSGSHSEHLG 240 D + LI +GIA+DP L+ W+ TV+ ++ ATL P SDWMQ+GGR+G+H+EHLG Sbjct: 183 HADQSDAELISSGIAVDPETLRGVWMDTVSNVLGVATLKRPASDWMQKGGRTGNHTEHLG 242 Query: 241 HLLSELQSMQRTFPGATW 258 HLLSELQSMQRTFP ATW Sbjct: 243 HLLSELQSMQRTFPNATW 260 >ref|YP_530580.1| phenylacetate-CoA oxygenase subunit PaaI [Rhodopseudomonas palustris BisB18] gb|ABD86261.1| Phenylacetate-CoA oxygenase, PaaI subunit [Rhodopseudomonas palustris BisB18] Length = 258 Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust. Identities = 199/258 (77%), Positives = 226/258 (87%) Query: 1 MATANIEVSETPLVLYALRRADDALILGHRLSEWCGHAPALEEDMALANMGLDLLGQARE 60 MATA+I ++ETPLV YALRR DDAL+LGHRLSEWCGHAP LEEDMALAN+GLDL+GQARE Sbjct: 1 MATASIAIAETPLVNYALRRGDDALVLGHRLSEWCGHAPMLEEDMALANIGLDLIGQARE 60 Query: 61 LYSYAAKVEGKDNDEDKFAYLRDVRQYRNLLLVEQPNGDFARTMVRQFFYAAFADLYWRA 120 L++YAA+VEG N ED AYLRDVRQYRNLLLVEQPNGDFARTM+RQ FY+AFAD YWRA Sbjct: 61 LFNYAAEVEGAANTEDSLAYLRDVRQYRNLLLVEQPNGDFARTMLRQLFYSAFADSYWRA 120 Query: 121 MMASSDPTLAAIAAKSEKESAYHVRHSSEWIVRLGDGTEESHRRAQGAIDDLWAYTGEMF 180 MM SSDPTLAAIAAKSEKESAYH+RH+SEW++RLGDGTEESHRRAQ A+D+LWA+TGEMF Sbjct: 121 MMGSSDPTLAAIAAKSEKESAYHLRHASEWVIRLGDGTEESHRRAQAAVDELWAFTGEMF 180 Query: 181 AVDDGERGLIDAGIAIDPAALQPRWLKTVTGIINEATLSLPKSDWMQQGGRSGSHSEHLG 240 VDDG+ LI GIAIDP L+ W +TV ++ ATL P S WMQ+GGR+G HSEHLG Sbjct: 181 QVDDGDAALIADGIAIDPERLRAGWSETVASVLARATLQQPSSSWMQKGGRAGHHSEHLG 240 Query: 241 HLLSELQSMQRTFPGATW 258 HLLSELQS+QR+FPGATW Sbjct: 241 HLLSELQSLQRSFPGATW 258