BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0243.0028.p (276 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001238905.1| hypothetical protein BBta_2872 [Bradyrhizobi... 397 e-108 ref|YP_001204584.1| hypothetical protein BRADO2526 [Bradyrhizobi... 396 e-108 ref|NP_769539.1| hypothetical protein blr2899 [Bradyrhizobium ja... 390 e-106 ref|YP_577935.1| protein of unknown function DUF395, YeeE/YedE [... 372 e-101 ref|ZP_08629018.1| lipocalin-like protein [Bradyrhizobiaceae bac... 350 1e-94 >ref|YP_001238905.1| hypothetical protein BBta_2872 [Bradyrhizobium sp. BTAi1] gb|ABQ34999.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 357 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 206/273 (75%), Positives = 233/273 (85%) Query: 1 LQPSFSAPVMFLGGLLFGYGMVLSNGCGSRALVLLGRGNLRSFVVVIVLGIFAEMTLKGL 60 LQP+FS P+M GG+LFGYGMVL+NGCGSRALVLLGRGNLRSFVVV+VL I AEMTLKGL Sbjct: 77 LQPTFSLPLMLAGGVLFGYGMVLANGCGSRALVLLGRGNLRSFVVVMVLAIAAEMTLKGL 136 Query: 61 IAPVRIAMVQASQATVAANSVPALLASTGLGAVQARMVAASVLSAVLIIFAFAHAPFRKS 120 IAP+RIA++Q SQ T S+PALL+ GL V AR++ A VL L+IFAFAHAPFR++ Sbjct: 137 IAPLRIALMQGSQTTATVTSLPALLSIGGLHGVPARLLPALVLGGGLMIFAFAHAPFRRA 196 Query: 121 FGQIAAGLIVGLLVAGGWFATGYLGADDFNPVPLTSLTFIAPIADALQYVMLSTGSTLNF 180 GQ+ AG IVGLL+A GWFATG+LGADDFNPVP+ SLTF+APIAD LQYVMLSTGST+NF Sbjct: 197 PGQMLAGFIVGLLIAAGWFATGHLGADDFNPVPVASLTFVAPIADGLQYVMLSTGSTVNF 256 Query: 181 GIVTVFGVFAGSLLTALATGRFQLEGYRSPQHMLRSAGGAALMGAGGVMAFGCSVGQGLT 240 GIVTV GV GSLLTA+AT RF+LEG+ SPQHMLRSAGGAALMG GGVMA GCSVGQGLT Sbjct: 257 GIVTVAGVLLGSLLTAVATRRFKLEGFHSPQHMLRSAGGAALMGIGGVMALGCSVGQGLT 316 Query: 241 GLSTLSLSSLIAIAGIMLGTGAGLRGSLRVRPL 273 GLSTL+L S +AIAGIM+G GLRG LRVRPL Sbjct: 317 GLSTLALPSFVAIAGIMIGAAMGLRGGLRVRPL 349 >ref|YP_001204584.1| hypothetical protein BRADO2526 [Bradyrhizobium sp. ORS 278] emb|CAL76347.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 348 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 203/273 (74%), Positives = 232/273 (84%) Query: 1 LQPSFSAPVMFLGGLLFGYGMVLSNGCGSRALVLLGRGNLRSFVVVIVLGIFAEMTLKGL 60 LQP+FS P+MF GG+LFGYGMVL+NGCGSRALVLLGRGNLRSFVVVIVL I AEMTLKGL Sbjct: 68 LQPAFSVPLMFAGGVLFGYGMVLANGCGSRALVLLGRGNLRSFVVVIVLAIAAEMTLKGL 127 Query: 61 IAPVRIAMVQASQATVAANSVPALLASTGLGAVQARMVAASVLSAVLIIFAFAHAPFRKS 120 IAP+RI + Q SQ T A S+PALL+ GL V AR++ A + L++FAFAHAPFR++ Sbjct: 128 IAPLRIVLTQGSQTTATATSLPALLSFGGLHGVPARLLPALAIGGALLVFAFAHAPFRRA 187 Query: 121 FGQIAAGLIVGLLVAGGWFATGYLGADDFNPVPLTSLTFIAPIADALQYVMLSTGSTLNF 180 GQ+ AGLIVGLL+A GWFATG LGADDFNPVP+ SLTF+APIADALQYVMLSTGST+NF Sbjct: 188 PGQMLAGLIVGLLIAAGWFATGTLGADDFNPVPVASLTFVAPIADALQYVMLSTGSTVNF 247 Query: 181 GIVTVFGVFAGSLLTALATGRFQLEGYRSPQHMLRSAGGAALMGAGGVMAFGCSVGQGLT 240 GI TV GV AGSL+TA+ T RF+LEG+ SPQHMLRSAGGAALMG GGVMA GCSVGQGLT Sbjct: 248 GIATVAGVLAGSLVTAIVTRRFKLEGFHSPQHMLRSAGGAALMGVGGVMALGCSVGQGLT 307 Query: 241 GLSTLSLSSLIAIAGIMLGTGAGLRGSLRVRPL 273 GLSTL+L S +A+ GI +GT GLRG+LRVRPL Sbjct: 308 GLSTLALPSFVAVGGIFIGTAVGLRGALRVRPL 340 >ref|NP_769539.1| hypothetical protein blr2899 [Bradyrhizobium japonicum USDA 110] dbj|BAC48164.1| blr2899 [Bradyrhizobium japonicum USDA 110] Length = 353 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 216/276 (78%), Positives = 248/276 (89%) Query: 1 LQPSFSAPVMFLGGLLFGYGMVLSNGCGSRALVLLGRGNLRSFVVVIVLGIFAEMTLKGL 60 LQ SFSAPV+FLGGLLFGYGMVLSNGCGSRALVLLGRGNLRSFVVVIVL I A+MTLKGL Sbjct: 78 LQQSFSAPVLFLGGLLFGYGMVLSNGCGSRALVLLGRGNLRSFVVVIVLAIAAQMTLKGL 137 Query: 61 IAPVRIAMVQASQATVAANSVPALLASTGLGAVQARMVAASVLSAVLIIFAFAHAPFRKS 120 +AP RIA+VQASQ +V ANS+P++LA+ GL +R +AA+V+ LI+FAFAH FR+S Sbjct: 138 VAPARIALVQASQTSVGANSLPSVLATLGLAEALSRAIAAAVIVVALILFAFAHPTFRRS 197 Query: 121 FGQIAAGLIVGLLVAGGWFATGYLGADDFNPVPLTSLTFIAPIADALQYVMLSTGSTLNF 180 GQIAAG+IVG+LVAGGWF TGYLGADDFNPVP+TSLTF+APIADALQY MLSTG TLNF Sbjct: 198 PGQIAAGVIVGVLVAGGWFVTGYLGADDFNPVPVTSLTFVAPIADALQYAMLSTGLTLNF 257 Query: 181 GIVTVFGVFAGSLLTALATGRFQLEGYRSPQHMLRSAGGAALMGAGGVMAFGCSVGQGLT 240 G+ TV GVFAGSL+TALATGRF+LEGY SP+HMLRSAGGAA+MG GGVMAFGCS+GQGLT Sbjct: 258 GVATVAGVFAGSLVTALATGRFKLEGYSSPRHMLRSAGGAAMMGIGGVMAFGCSIGQGLT 317 Query: 241 GLSTLSLSSLIAIAGIMLGTGAGLRGSLRVRPLATA 276 G+STL+L SL+A+AGI+LGT AGLRG+LRV+PLA A Sbjct: 318 GVSTLALGSLVALAGILLGTTAGLRGALRVQPLAMA 353 >ref|YP_577935.1| protein of unknown function DUF395, YeeE/YedE [Nitrobacter hamburgensis X14] gb|ABE63475.1| protein of unknown function DUF395, YeeE/YedE [Nitrobacter hamburgensis X14] Length = 360 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 196/275 (71%), Positives = 230/275 (83%) Query: 1 LQPSFSAPVMFLGGLLFGYGMVLSNGCGSRALVLLGRGNLRSFVVVIVLGIFAEMTLKGL 60 LQPSFSAP+MF GG++FGYGMVLSNGCGSRAL+LLGRGNLRS VVVIVLGI A+MTLKGL Sbjct: 77 LQPSFSAPLMFAGGIIFGYGMVLSNGCGSRALILLGRGNLRSLVVVIVLGIAAQMTLKGL 136 Query: 61 IAPVRIAMVQASQATVAANSVPALLASTGLGAVQARMVAASVLSAVLIIFAFAHAPFRKS 120 IAP RIA++QASQAT S+PAL + GL A AR +AA +S VLI FAF+HA FR+S Sbjct: 137 IAPARIAVLQASQATPNVTSLPALAGTLGLSASLARALAALAVSGVLIAFAFSHAAFRRS 196 Query: 121 FGQIAAGLIVGLLVAGGWFATGYLGADDFNPVPLTSLTFIAPIADALQYVMLSTGSTLNF 180 +GQIAAGLIVGLLVA GW+ATGYLGADDFNPVP+TS+TF+AP+AD +QY+MLSTG T+NF Sbjct: 197 WGQIAAGLIVGLLVAAGWYATGYLGADDFNPVPVTSITFVAPVADTVQYMMLSTGLTMNF 256 Query: 181 GIVTVFGVFAGSLLTALATGRFQLEGYRSPQHMLRSAGGAALMGAGGVMAFGCSVGQGLT 240 G+ V GV GSL+TAL T RF LE Y SP+HMLRS GAA MG+GG MA+GCSVGQGLT Sbjct: 257 GVALVPGVVLGSLVTALVTRRFHLEAYHSPRHMLRSVTGAAFMGSGGAMAYGCSVGQGLT 316 Query: 241 GLSTLSLSSLIAIAGIMLGTGAGLRGSLRVRPLAT 275 GLSTL+L+S +AI GI++G GLRG LRV+ L + Sbjct: 317 GLSTLALASFVAITGIVVGAAVGLRGPLRVQALTS 351 >ref|ZP_08629018.1| lipocalin-like protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08377.1| lipocalin-like protein [Bradyrhizobiaceae bacterium SG-6C] Length = 349 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 178/275 (64%), Positives = 219/275 (79%) Query: 1 LQPSFSAPVMFLGGLLFGYGMVLSNGCGSRALVLLGRGNLRSFVVVIVLGIFAEMTLKGL 60 LQPSFSAP++F GGLLFG+GMVLSNGC SRALVLLG+GNLRS VV+ ++G+ A+MTLKGL Sbjct: 74 LQPSFSAPLIFAGGLLFGFGMVLSNGCASRALVLLGKGNLRSLVVIAIIGVTAQMTLKGL 133 Query: 61 IAPVRIAMVQASQATVAANSVPALLASTGLGAVQARMVAASVLSAVLIIFAFAHAPFRKS 120 IAP R+A +QA+Q T A S PALLA+ G+ AR+ + S L+IFAF+ FR++ Sbjct: 134 IAPARLAFLQATQITPTAVSAPALLATMGIDESVARIAVTLIASGALLIFAFSDGQFRRA 193 Query: 121 FGQIAAGLIVGLLVAGGWFATGYLGADDFNPVPLTSLTFIAPIADALQYVMLSTGSTLNF 180 +GQIAAGL +GLLV GW ATG+LGADDFNP+P+TSLTF++PIAD LQY MLSTG TL+F Sbjct: 194 YGQIAAGLAMGLLVTAGWLATGWLGADDFNPIPVTSLTFVSPIADTLQYTMLSTGLTLSF 253 Query: 181 GIVTVFGVFAGSLLTALATGRFQLEGYRSPQHMLRSAGGAALMGAGGVMAFGCSVGQGLT 240 GI V GV +GS++TA+ +GRF+LEGY SP HMLRS GAALMG GG MA+GCS+GQGLT Sbjct: 254 GIALVAGVLSGSVVTAIVSGRFKLEGYTSPNHMLRSISGAALMGIGGAMAYGCSIGQGLT 313 Query: 241 GLSTLSLSSLIAIAGIMLGTGAGLRGSLRVRPLAT 275 GLSTL + S IA+AGI+ G G+RG+ V LAT Sbjct: 314 GLSTLGMPSFIAVAGILSGAALGIRGAAVVPALAT 348