BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0243.0027.p (313 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769540.1| hypothetical protein bll2900 [Bradyrhizobium ja... 358 4e-97 ref|YP_003909469.1| hypothetical protein BC1003_4243 [Burkholder... 301 9e-80 ref|YP_534459.1| hypothetical protein RPC_4618 [Rhodopseudomonas... 282 5e-74 gb|EFV86040.1| hypothetical protein HMPREF0005_01257 [Achromobac... 227 2e-57 gb|EGP47173.1| hypothetical protein AXXA_07755 [Achromobacter xy... 216 5e-54 >ref|NP_769540.1| hypothetical protein bll2900 [Bradyrhizobium japonicum USDA 110] dbj|BAC48165.1| bll2900 [Bradyrhizobium japonicum USDA 110] Length = 304 Score = 358 bits (920), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 201/297 (67%), Positives = 243/297 (81%) Query: 17 QSLSPTKAAALFIVVVLAWGINWSVTKSLVEAVPPLWTASIRSWVALLALLVILRASGNL 76 SLSP A LF++VVLAWG+NWSVTK LV+ + PLWT++IRSW+AL AL VIL S NL Sbjct: 2 NSLSPRAAVGLFLIVVLAWGVNWSVTKQLVQFLSPLWTSAIRSWIALAALFVILGLSNNL 61 Query: 77 IIPRIADVPVVLSVALLHMTFFSTLVAAGLRYLPASKGVVLGYTTPLWVALAAAAARTER 136 +IP D+PVVLSVALLHMT FS LVAAG+R+LPA K VVLGYTTPLWVA+AA + Sbjct: 62 VIPERRDIPVVLSVALLHMTVFSVLVAAGVRFLPAGKAVVLGYTTPLWVAIAAPLIGNDT 121 Query: 137 LGMLKLVGVALGLAGLCVILNPASLDWSNLHVLAGAGMIIIAAICWAANIIYIRSHRWIA 196 L K+ G LGL GL VILNP S+DW+N +V+ GAGM+I+AAI WAANIIYIR+HRW+A Sbjct: 122 LTAPKVAGALLGLIGLAVILNPTSIDWTNGNVMLGAGMVILAAIAWAANIIYIRAHRWLA 181 Query: 197 TPLQLLLWQVLVATLVLTMSALVTEGVPEVTWSPHLLLLFLYSGFIGTALAYWAMSVVNK 256 +PLQLL+WQVLVAT+VL+++A + +G+P V WS L+LLFLYSG IGTALAYWAMS+VNK Sbjct: 182 SPLQLLIWQVLVATVVLSITAAIVDGIPHVNWSWRLVLLFLYSGLIGTALAYWAMSMVNK 241 Query: 257 SLPALTTSLGTTATPIVGIVTAALLLGEPIDLSLAIAAALIVGGIALSSLADAPARA 313 S+ ALTTSLGTTATP+VGI +AA+LLGEPIDLSLA+AA LIV GI L++L D R+ Sbjct: 242 SISALTTSLGTTATPLVGIASAAVLLGEPIDLSLAVAAGLIVAGIGLATLGDRLLRS 298 >ref|YP_003909469.1| hypothetical protein BC1003_4243 [Burkholderia sp. CCGE1003] gb|ADN60178.1| protein of unknown function DUF6 transmembrane [Burkholderia sp. CCGE1003] Length = 320 Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 156/294 (53%), Positives = 211/294 (71%) Query: 12 DSAVNQSLSPTKAAALFIVVVLAWGINWSVTKSLVEAVPPLWTASIRSWVALLALLVILR 71 D+ +S A LF +V+L+WG+NW+ TK +V V PLWT +IR +A ALLVIL Sbjct: 2 DATAAHPVSRRLACFLFALVILSWGLNWTATKIIVHQVTPLWTTAIRCTIASAALLVILL 61 Query: 72 ASGNLIIPRIADVPVVLSVALLHMTFFSTLVAAGLRYLPASKGVVLGYTTPLWVALAAAA 131 A G LIIPR DVPVVL++A+LHM FSTLVA GL+++P + +VLGYTTP+WV A Sbjct: 62 ARGQLIIPRRGDVPVVLAIAMLHMVAFSTLVALGLKFVPVGRSIVLGYTTPIWVTPGAWL 121 Query: 132 ARTERLGMLKLVGVALGLAGLCVILNPASLDWSNLHVLAGAGMIIIAAICWAANIIYIRS 191 ER ++ +ALGL GL ++ NP +LDWS+ H L G G+I++AA WAANI+Y+R+ Sbjct: 122 FLRERPSPRQIASIALGLVGLALMFNPWALDWSDTHTLFGNGVILLAAFFWAANILYVRA 181 Query: 192 HRWIATPLQLLLWQVLVATLVLTMSALVTEGVPEVTWSPHLLLLFLYSGFIGTALAYWAM 251 H+W++TP QL+ WQ L+A+ VL++ AL +G P + WSP L FL++G GTALAYWAM Sbjct: 182 HQWVSTPFQLVFWQTLLASGVLSVLALCMDGAPGIVWSPQLAGAFLFAGLCGTALAYWAM 241 Query: 252 SVVNKSLPALTTSLGTTATPIVGIVTAALLLGEPIDLSLAIAAALIVGGIALSS 305 +VVN+SLPA+TTSLG ATP+VGI ++ + LGE I SL I+ A I+GGIAL++ Sbjct: 242 AVVNRSLPAVTTSLGLLATPVVGIASSTIGLGETISASLVISMATILGGIALAT 295 >ref|YP_534459.1| hypothetical protein RPC_4618 [Rhodopseudomonas palustris BisB18] gb|ABD90140.1| protein of unknown function DUF6, transmembrane [Rhodopseudomonas palustris BisB18] Length = 286 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 142/271 (52%), Positives = 201/271 (74%) Query: 41 VTKSLVEAVPPLWTASIRSWVALLALLVILRASGNLIIPRIADVPVVLSVALLHMTFFST 100 +TK +V+ + P+W+ ++R +A L +L A GN IIP+ DVPVV ALLHM FS Sbjct: 1 MTKLIVQDMSPVWSTALRCGIAAATLGPLLWAQGNFIIPKRGDVPVVFCTALLHMVAFSA 60 Query: 101 LVAAGLRYLPASKGVVLGYTTPLWVALAAAAARTERLGMLKLVGVALGLAGLCVILNPAS 160 LVAAGL+++PA + +VLGYTTP+WVA+ A +E + + +G+A+GLAGL VI + + Sbjct: 61 LVAAGLQFVPAGRAIVLGYTTPIWVAVGARIFLSEAITTRRAIGIAIGLAGLAVIFDSRA 120 Query: 161 LDWSNLHVLAGAGMIIIAAICWAANIIYIRSHRWIATPLQLLLWQVLVATLVLTMSALVT 220 LDW + L G+ +I+ AA CWAANI+Y+R+H+WI+TP QL+ WQVL+A +VL++ A+ T Sbjct: 121 LDWGDRKSLLGSSLILTAAFCWAANIVYVRAHKWISTPFQLVFWQVLIAAIVLSILAMST 180 Query: 221 EGVPEVTWSPHLLLLFLYSGFIGTALAYWAMSVVNKSLPALTTSLGTTATPIVGIVTAAL 280 EGVP + WS L+ L LYSG I TALA+WAMS+VN+SLPA+TTSLG ATP++GIV+AA+ Sbjct: 181 EGVPHIEWSQRLVGLLLYSGVICTALAHWAMSMVNRSLPAVTTSLGLLATPVLGIVSAAI 240 Query: 281 LLGEPIDLSLAIAAALIVGGIALSSLADAPA 311 +L E ++ SL IA ALI+GGIAL +++ + Sbjct: 241 VLNETLEPSLFIAMALIIGGIALGTVSGGKS 271 >gb|EFV86040.1| hypothetical protein HMPREF0005_01257 [Achromobacter xylosoxidans C54] Length = 298 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 143/293 (48%), Positives = 192/293 (65%) Query: 17 QSLSPTKAAALFIVVVLAWGINWSVTKSLVEAVPPLWTASIRSWVALLALLVILRASGNL 76 + LS KA +L +VVVLAWG W ++K L++ + P+W + RS V ALL + A + Sbjct: 4 EILSRRKALSLLVVVVLAWGFTWVLSKLLLQYMTPVWAVAARSVVGTAALLALGLALRRV 63 Query: 77 IIPRIADVPVVLSVALLHMTFFSTLVAAGLRYLPASKGVVLGYTTPLWVALAAAAARTER 136 P AD+PV+LSV LLHM F+ LV+ GL+Y+PA + VVL YTTPLWV AA E Sbjct: 64 AWPVKADIPVILSVGLLHMGAFAALVSLGLQYVPAGRSVVLAYTTPLWVIPAARLFLGEP 123 Query: 137 LGMLKLVGVALGLAGLCVILNPASLDWSNLHVLAGAGMIIIAAICWAANIIYIRSHRWIA 196 +G + +G+ALGL GL VI NP + DW + + G G++++AA+CWAANI+Y+R+HRW+ Sbjct: 124 IGRGRQLGLALGLLGLVVIFNPLAFDWRDHDAVFGNGLVLLAALCWAANIVYVRAHRWVT 183 Query: 197 TPLQLLLWQVLVATLVLTMSALVTEGVPEVTWSPHLLLLFLYSGFIGTALAYWAMSVVNK 256 P +L WQ L+A++VLT A TEG P V WSP L L Y G G A+AYWA VN+ Sbjct: 184 PPFELAFWQALLASVVLTALAWATEGAPRVIWSPGLAWLLGYGGVFGIAVAYWAAVNVNR 243 Query: 257 SLPALTTSLGTTATPIVGIVTAALLLGEPIDLSLAIAAALIVGGIALSSLADA 309 SLPA T+LG P+VG++ +A LL E + LSL + ALIVGGIA L +A Sbjct: 244 SLPAGLTALGLLGVPVVGLLCSAALLREALGLSLLLGMALIVGGIAAGVLGEA 296 >gb|EGP47173.1| hypothetical protein AXXA_07755 [Achromobacter xylosoxidans AXX-A] Length = 298 Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 137/287 (47%), Positives = 185/287 (64%) Query: 16 NQSLSPTKAAALFIVVVLAWGINWSVTKSLVEAVPPLWTASIRSWVALLALLVILRASGN 75 + LS +A +L +VVVLAWG W V+K L++ + P+W + RS ALL + A Sbjct: 3 TEILSRRQALSLLVVVVLAWGFTWVVSKLLLQYMTPIWAVAARSVAGTAALLALGLALRR 62 Query: 76 LIIPRIADVPVVLSVALLHMTFFSTLVAAGLRYLPASKGVVLGYTTPLWVALAAAAARTE 135 + P AD+PV+LSV LLHM F+ LV+ GL+Y+PA + VVL YTTPLWV AA E Sbjct: 63 VAWPVKADIPVILSVGLLHMGAFAALVSLGLQYVPAGRSVVLAYTTPLWVIPAARVFLGE 122 Query: 136 RLGMLKLVGVALGLAGLCVILNPASLDWSNLHVLAGAGMIIIAAICWAANIIYIRSHRWI 195 +G + +G+ALGL GL VI NP + DW N + G G++++AA+CWAANI+Y+R+HRW+ Sbjct: 123 PIGRGRQLGLALGLLGLAVIFNPLAFDWGNHEAVFGNGLVLLAALCWAANIVYVRAHRWV 182 Query: 196 ATPLQLLLWQVLVATLVLTMSALVTEGVPEVTWSPHLLLLFLYSGFIGTALAYWAMSVVN 255 P +L WQ L+A+ VL A EG P V WSP L L Y G G A+AYWA VN Sbjct: 183 TPPFELAFWQALLASGVLAAVAWAAEGAPRVVWSPDLGWLLGYGGVFGIAVAYWAAVNVN 242 Query: 256 KSLPALTTSLGTTATPIVGIVTAALLLGEPIDLSLAIAAALIVGGIA 302 +SLPA TS+G P+VG++ +A++L EP+ L + ALIVGGIA Sbjct: 243 RSLPAGVTSIGLLGVPVVGLLCSAMVLREPLSAPLLLGMALIVGGIA 289