BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0243.0026.p (485 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769541.1| transcriptional regulator [Bradyrhizobium japon... 614 e-173 ref|YP_534458.1| GntR family transcriptional regulator [Rhodopse... 414 e-113 ref|YP_001058574.2| GntR family transcriptional regulator [Burkh... 373 e-101 ref|YP_108682.1| GntR family transcriptional regulator [Burkhold... 372 e-101 ref|ZP_04965456.1| transcriptional regulator, GntR family/aminot... 372 e-101 >ref|NP_769541.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC48166.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 515 Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust. Identities = 321/476 (67%), Positives = 367/476 (77%) Query: 2 ILAELLALKRSDDAGLAAQLTQQLRALMAGGRIRSGAMLPSSRSLAAELDVARNTVTHAY 61 ++A L+ LKR+ + GL AQLT QLR L+ GRI G LPSSR LA++L V+RNTVT+A+ Sbjct: 40 MIAGLIELKRTGEEGLMAQLTSQLRELIGSGRIGKGRGLPSSRQLASDLGVSRNTVTYAF 99 Query: 62 EQLAAEGYLRVAARRRPVVTDDIEARFAKPALAPKREAARKPSLSPWALQLSDSDWPLSY 121 EQLAAEGYL + RRPVVT D R A + P LSPWA +L +DWP+SY Sbjct: 100 EQLAAEGYLAASHGRRPVVTVDGGERIEAAGAATSGVRSGTPRLSPWASKLKQADWPMSY 159 Query: 122 QADFRPLRPGLADAREFPHEIWARCLRRSALRRRFNDQTVVNRPSLREALCDYLEVNRGV 181 A +PLRPG D REFP+E+WARCLRRSA+R + VNRP LREAL YL +RGV Sbjct: 160 LAQLKPLRPGQGDFREFPNEVWARCLRRSAVRAARRELGSVNRPRLREALAHYLATSRGV 219 Query: 182 RAEADQILILPTAQAALTLIAATAIVAGDAVWTEDPGYPGAAAAFRAAGADVVGVRLDQW 241 RA ADQI+ILP+AQAALTLIAA I GD VW EDPGYPGAAAAFRA+GA V G+RLD+ Sbjct: 220 RATADQIMILPSAQAALTLIAAVVITQGDEVWVEDPGYPGAAAAFRASGARVTGIRLDEQ 279 Query: 242 GMMRMCETRAPKLIFTTPSHQHPTGRVMPVARRTELLASAEPGKTWIVEDDYDGEFHFDS 301 GM RM AP LIF TPSHQHPTGR+M +ARRTE L +PGKTWIVEDDYDGEFH+DS Sbjct: 280 GMQRMPGVAAPTLIFMTPSHQHPTGRLMSLARRTEFLGMCKPGKTWIVEDDYDGEFHYDS 339 Query: 302 RPMPALQGLDREGRVLYLGTFAKAMTADIRLGYLVVPPQLARTMEIAQRHLGLIASVHVQ 361 RP+PALQGLD GRV Y+GTF+KAMT+DIRLGYLVVPP L +EIAQRH+GLIA+ HVQ Sbjct: 340 RPVPALQGLDTHGRVFYVGTFSKAMTSDIRLGYLVVPPALVSALEIAQRHIGLIAASHVQ 399 Query: 362 EALAGFMADGHFLAHVRRMRRIYRGRRDHLATALTRHLDPVLTAEIPPGGMQLIARFKDG 421 EALA F+ADGHFLAH+RRMRR+Y RRDHL L RHL VLTAE+P GG+QL+AR K G Sbjct: 400 EALAEFIADGHFLAHLRRMRRLYHARRDHLVEGLERHLGEVLTAEVPSGGIQLVARLKRG 459 Query: 422 TVDRNAVARLVAAGVEVRALSSLALERPRDHGLLLGFAAWRENEIGAAVRIMANCL 477 D+ AV RLVAAGVE RALSSLAL RPRDHGLLLGFAAWRENEI AAVR MA+C Sbjct: 460 RADQAAVKRLVAAGVETRALSSLALGRPRDHGLLLGFAAWRENEISAAVRTMASCF 515 >ref|YP_534458.1| GntR family transcriptional regulator [Rhodopseudomonas palustris BisB18] gb|ABD90139.1| transcriptional regulator, GntR family [Rhodopseudomonas palustris BisB18] Length = 480 Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust. Identities = 233/476 (48%), Positives = 301/476 (63%) Query: 2 ILAELLALKRSDDAGLAAQLTQQLRALMAGGRIRSGAMLPSSRSLAAELDVARNTVTHAY 61 +L+ L+ L D L QLTQQLR+L+ GR+ LPSSR LA L V RNTV+ A Sbjct: 4 LLSGLIKLSPDSDETLLRQLTQQLRSLITSGRLAPAQRLPSSRDLAQSLSVGRNTVSFAI 63 Query: 62 EQLAAEGYLRVAARRRPVVTDDIEARFAKPALAPKREAARKPSLSPWALQLSDSDWPLSY 121 EQLAAEGYL + RR VV+ KP + + +SPWA L ++ WP Y Sbjct: 64 EQLAAEGYLTTSPGRRAVVSIGASLDARKPQRIKTDQRTVELRVSPWARSLHNASWPPIY 123 Query: 122 QADFRPLRPGLADAREFPHEIWARCLRRSALRRRFNDQTVVNRPSLREALCDYLEVNRGV 181 + R +PGLAD REFPH+IWARCLRR+A R + N +LR+AL +L +RGV Sbjct: 124 RGRPRAFQPGLADEREFPHDIWARCLRRAARSARVRGDSSHNSAALRKALQQHLAEHRGV 183 Query: 182 RAEADQILILPTAQAALTLIAATAIVAGDAVWTEDPGYPGAAAAFRAAGADVVGVRLDQW 241 +A DQI+I+P+AQA + LIA I GD W E PGY GA AA ++AGA V GV LD++ Sbjct: 184 KATPDQIMIVPSAQAGIALIAKVMIGTGDLAWIESPGYGGAFAALQSAGAIVAGVPLDEF 243 Query: 242 GMMRMCETRAPKLIFTTPSHQHPTGRVMPVARRTELLASAEPGKTWIVEDDYDGEFHFDS 301 GM P+LIF TPSHQ+PTGR+MP RR ELL A IVEDDYD EFH+++ Sbjct: 244 GMALGERKDIPRLIFVTPSHQYPTGRLMPAGRRLELLRFAASVGASIVEDDYDSEFHYEA 303 Query: 302 RPMPALQGLDREGRVLYLGTFAKAMTADIRLGYLVVPPQLARTMEIAQRHLGLIASVHVQ 361 RP+ ALQG+ VLY+GTF+K+M ADIR+GY++VP +L E+AQRH+GL A++ +Q Sbjct: 304 RPVSALQGMGLSTTVLYVGTFSKSMFADIRIGYIIVPERLIEIFELAQRHMGLSAAIPMQ 363 Query: 362 EALAGFMADGHFLAHVRRMRRIYRGRRDHLATALTRHLDPVLTAEIPPGGMQLIARFKDG 421 +ALA F+ +G +LAHVR+M R+Y+ RRD L AL L+ EIP GGMQL+AR Sbjct: 364 DALAEFIRNGMYLAHVRKMTRLYKERRDQLLKALASETGDRLSIEIPAGGMQLLARCGAF 423 Query: 422 TVDRNAVARLVAAGVEVRALSSLALERPRDHGLLLGFAAWRENEIGAAVRIMANCL 477 D ARL+ AGV R LSS+ + + GL LGFAAW + EI A RI+ + Sbjct: 424 ARDDQLSARLLEAGVVARPLSSMVFHKTKAQGLFLGFAAWNDVEIERAARILGRIV 479 >ref|YP_001058574.2| GntR family transcriptional regulator [Burkholderia pseudomallei 668] gb|ABN84661.2| transcriptional regulator, GntR family/aminotransferase family protein [Burkholderia pseudomallei 668] Length = 559 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 226/478 (47%), Positives = 280/478 (58%), Gaps = 6/478 (1%) Query: 3 LAELLALKRSDDAGLAA--QLTQQLRALMAGGRIRSGAMLPSSRSLAAELDVARNTVTHA 60 LA L + +G+A QL QLR +A G + SG LPSSR+LA L V+RNTV A Sbjct: 78 LAGLFDFEMDPQSGVALTRQLRDQLRRAIAAGSLASGRRLPSSRALALHLRVSRNTVCAA 137 Query: 61 YEQLAAEGYLRVAARRRPVVTDDIEARFAKPALAPKREAAR-KPSLSPWALQLSDSDWPL 119 EQLA EGYL V+ RRPVV A A+ R + + +S WA ++ SDWP Sbjct: 138 IEQLAMEGYLDVSRGRRPVVAPMPSASLV--AIGSDRPVSDGRSGMSQWAQRIDRSDWPF 195 Query: 120 SYQADFRPLRPGLADAREFPHEIWARCLRRSALRRRFNDQTVVNRPSLREALCDYLEVNR 179 + P P +ADAR FPH IW RCLR + T NRP LR AL +L R Sbjct: 196 IGEGRPTPFAPCVADARAFPHAIWGRCLRTATRYAVARTSTACNRPGLRRALLHHLVEYR 255 Query: 180 GVRAEADQILILPTAQAALTLIAATAIVAGDAVWTEDPGYPGAAAAFRAAGADVVGVRLD 239 GV A+A Q+ ++PTAQAA+ L+A + GD W E PGY GA AAF AAGA V G+ LD Sbjct: 256 GVNADAHQVFLMPTAQAAIALVARVLLDPGDLAWVESPGYGGARAAFEAAGATVQGIALD 315 Query: 240 QWGMMRMCETRAPKLIFTTPSHQHPTGRVMPVARRTELLASAEPGKTWIVEDDYDGEFHF 299 Q GM T P+LIF TP+HQHPTG +MP ARR LL A I+EDDYD EFH+ Sbjct: 316 QSGMAFETSTDTPRLIFVTPAHQHPTGLLMPPARRQALLRFAARVGARIIEDDYDSEFHY 375 Query: 300 DSRPMPALQGLDREGRVLYLGTFAKAMTADIRLGYLVVPPQLARTMEIAQRHLGLIASVH 359 + RP+ ALQG D V Y+GTF+K++ ADIR+GY+VVP AQRH G I Sbjct: 376 EGRPVAALQGADDADSVFYVGTFSKSLHADIRVGYVVVPGHFVDVFAKAQRHTGQIVGAT 435 Query: 360 VQEALAGFMADGHFLAHVRRMRRIYRGRRDHLATALTRHLDPVLTAEIPPGGMQLIARFK 419 +Q+ALA F+ DGH+ AH+R+M R+Y RRD+L AL + + LT P GGMQ++AR Sbjct: 436 LQDALAEFIDDGHYAAHIRKMTRLYHARRDYLCDAL-KAVGSELTVSPPDGGMQVVARLG 494 Query: 420 DGTVDRNAVARLVAAGVEVRALSSLALERPRDHGLLLGFAAWRENEIGAAVRIMANCL 477 DR RL AGV R LS + GL LGFAAW E EI A VRI+A + Sbjct: 495 PLRDDREICRRLAEAGVTARPLSPHYCAQTGAQGLFLGFAAWNECEIDAGVRILARVI 552 >ref|YP_108682.1| GntR family transcriptional regulator [Burkholderia pseudomallei K96243] emb|CAH36084.1| putative GntR-family transcriptional regulator [Burkholderia pseudomallei K96243] Length = 486 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 225/478 (47%), Positives = 279/478 (58%), Gaps = 6/478 (1%) Query: 3 LAELLALKRSDDAGLAA--QLTQQLRALMAGGRIRSGAMLPSSRSLAAELDVARNTVTHA 60 LA L + +G+A QL QLR +A G + SG LPSSR+LA L V+RNTV A Sbjct: 5 LAGLFDFEMDPQSGVALTRQLRDQLRRAIAAGSLASGRRLPSSRALALHLRVSRNTVCAA 64 Query: 61 YEQLAAEGYLRVAARRRPVVTDDIEARFAKPALAPKREAAR-KPSLSPWALQLSDSDWPL 119 EQLA EGYL V+ RRPVV A A+ R + + +S WA ++ SDWP Sbjct: 65 IEQLAMEGYLDVSRGRRPVVAPMPSAGLV--AIGSDRPVSDGRSGMSQWAQRIDRSDWPF 122 Query: 120 SYQADFRPLRPGLADAREFPHEIWARCLRRSALRRRFNDQTVVNRPSLREALCDYLEVNR 179 + P P +ADAR FPH IW RCLR + T NRP LR AL +L R Sbjct: 123 ISEGRPTPFAPCVADARAFPHAIWGRCLRTATRYAVARTSTACNRPGLRRALLHHLVEYR 182 Query: 180 GVRAEADQILILPTAQAALTLIAATAIVAGDAVWTEDPGYPGAAAAFRAAGADVVGVRLD 239 GV A+A Q+ ++PTAQAA+ L+A + GD W E PGY GA AAF AAGA V G+ LD Sbjct: 183 GVNADAHQVFLMPTAQAAIALVARVLLDPGDLAWVESPGYGGARAAFEAAGATVQGIALD 242 Query: 240 QWGMMRMCETRAPKLIFTTPSHQHPTGRVMPVARRTELLASAEPGKTWIVEDDYDGEFHF 299 Q GM T P+LIF TP+HQHPTG +MP ARR LL A I+EDDYD EFH+ Sbjct: 243 QSGMAFETSTDTPRLIFVTPAHQHPTGLLMPPARRQALLRFAARVGARIIEDDYDSEFHY 302 Query: 300 DSRPMPALQGLDREGRVLYLGTFAKAMTADIRLGYLVVPPQLARTMEIAQRHLGLIASVH 359 + RP+ ALQG D V Y+GTF+K++ ADIR+GY+VVP AQRH G I Sbjct: 303 EGRPVAALQGADNADSVFYVGTFSKSLHADIRVGYVVVPGHFVDVFAKAQRHTGQIVGAT 362 Query: 360 VQEALAGFMADGHFLAHVRRMRRIYRGRRDHLATALTRHLDPVLTAEIPPGGMQLIARFK 419 +Q+ALA F+ DGH+ AH+R+ R+Y RRD+L AL + + LT P GGMQ++AR Sbjct: 363 LQDALAEFIDDGHYAAHIRKTTRLYHARRDYLCDAL-KAVGSELTVSPPDGGMQVVARLG 421 Query: 420 DGTVDRNAVARLVAAGVEVRALSSLALERPRDHGLLLGFAAWRENEIGAAVRIMANCL 477 DR RL AGV R LS + GL LGFAAW E EI A VRI+A + Sbjct: 422 PLRDDREICRRLAEAGVTARPLSPHYCAQTGAQGLFLGFAAWNECEIDAGVRILARVI 479 >ref|ZP_04965456.1| transcriptional regulator, GntR family/aminotransferase, classes I and II [Burkholderia pseudomallei 406e] gb|EDO84015.1| transcriptional regulator, GntR family/aminotransferase, classes I and II [Burkholderia pseudomallei 406e] Length = 559 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 226/478 (47%), Positives = 279/478 (58%), Gaps = 6/478 (1%) Query: 3 LAELLALKRSDDAGLAA--QLTQQLRALMAGGRIRSGAMLPSSRSLAAELDVARNTVTHA 60 LA L + +G+A QL QLR +A G + SG LPSSR+LA L V+RNTV A Sbjct: 78 LAGLFDFEMDPQSGVALTRQLRDQLRRAIAAGSLASGRRLPSSRALALHLRVSRNTVCAA 137 Query: 61 YEQLAAEGYLRVAARRRPVVTDDIEARFAKPALAPKREAAR-KPSLSPWALQLSDSDWPL 119 EQLA EGYL V+ RRPVV A A+ R + + +S WA ++ SDWP Sbjct: 138 IEQLAMEGYLDVSRGRRPVVAPMPSAGLV--AIGSDRPVSDGRSGMSQWAQRIDRSDWPF 195 Query: 120 SYQADFRPLRPGLADAREFPHEIWARCLRRSALRRRFNDQTVVNRPSLREALCDYLEVNR 179 + P P +ADAR FPH IW RCLR + T NRP LR AL +L R Sbjct: 196 ISEGRPTPFAPCVADARAFPHAIWGRCLRTATRYAVARTSTACNRPGLRRALLHHLVEYR 255 Query: 180 GVRAEADQILILPTAQAALTLIAATAIVAGDAVWTEDPGYPGAAAAFRAAGADVVGVRLD 239 GV A+A Q+ ++PTAQAA+ L+A + GD W E PGY GA AAF AAGA V G+ LD Sbjct: 256 GVNADAHQVFLMPTAQAAIALVARVLLDPGDLAWVESPGYGGARAAFEAAGATVQGIALD 315 Query: 240 QWGMMRMCETRAPKLIFTTPSHQHPTGRVMPVARRTELLASAEPGKTWIVEDDYDGEFHF 299 Q GM T P+LIF TP+HQHPTG +MP ARR LL A IVEDDYD EFH+ Sbjct: 316 QSGMAFETSTDTPRLIFVTPAHQHPTGLLMPPARRQALLRFAARVGARIVEDDYDSEFHY 375 Query: 300 DSRPMPALQGLDREGRVLYLGTFAKAMTADIRLGYLVVPPQLARTMEIAQRHLGLIASVH 359 + RP+ ALQG D V Y+GTF+K++ ADIR+GY+VVP AQRH G I Sbjct: 376 EGRPVAALQGADNADSVFYVGTFSKSLHADIRVGYVVVPGHFVDVFAKAQRHTGQIVGAT 435 Query: 360 VQEALAGFMADGHFLAHVRRMRRIYRGRRDHLATALTRHLDPVLTAEIPPGGMQLIARFK 419 +Q+ALA F+ DGH+ AH+R+ R+Y RRD+L AL + + LT P GGMQ++AR Sbjct: 436 LQDALAEFIDDGHYAAHIRKTTRLYHARRDYLCDAL-KAVGSELTVSPPDGGMQVVARLG 494 Query: 420 DGTVDRNAVARLVAAGVEVRALSSLALERPRDHGLLLGFAAWRENEIGAAVRIMANCL 477 DR RL AGV R LS + GL LGFAAW E EI A VRI+A + Sbjct: 495 PLRDDREICRRLAEAGVTARPLSPHYCAQTGAQGLFLGFAAWNECEIDAGVRILARVI 552