BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0243.0010.p (415 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_780622.1| extracellular ligand-binding receptor [Rhodopse... 741 0.0 ref|NP_769562.1| ABC transporter amino acid-binding protein [Bra... 733 0.0 ref|YP_001990946.1| branched-chain amino acid ABC transporter su... 732 0.0 ref|NP_947093.1| putative branched-chain amino acid transport sy... 730 0.0 ref|YP_004110081.1| extracellular ligand-binding receptor [Rhodo... 730 0.0 >ref|YP_780622.1| extracellular ligand-binding receptor [Rhodopseudomonas palustris BisA53] gb|ABJ05642.1| Extracellular ligand-binding receptor [Rhodopseudomonas palustris BisA53] Length = 414 Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/413 (84%), Positives = 385/413 (93%) Query: 1 MTISRRNVLLGATAAAALGPMAARAQASEVAIGVIYPLSGASAQIGVDAQRAFETAADII 60 MT++RR +LLG A+ A+ P+AARAQ SEV IGVIYPLSGASAQIGVDAQ+AFETAA++I Sbjct: 1 MTLNRRQMLLGGAASVAMLPLAARAQTSEVVIGVIYPLSGASAQIGVDAQKAFETAAELI 60 Query: 61 NKNYDFALPLAKGEGLSGLGGAKVKLVFADHQADPQKGRAEAERLITQEKVCAVIGTYQS 120 N N D+ LPLA+G GL GLGGAKV+LVFADHQADPQKGRAEAERLITQ+KVCA++GTYQS Sbjct: 61 NSNNDYDLPLARGVGLPGLGGAKVRLVFADHQADPQKGRAEAERLITQDKVCAIVGTYQS 120 Query: 121 AVAVTVSQICERYGVPFLSADNSSPSLHRRGLKYYFRASPHDEMFSTAMFDFFDAMKKKG 180 +VAVTVSQICERY +PFLSADNSSPSLHRRGLK+YFRA+PHDEMFSTAMFDFFDA KKKG Sbjct: 121 SVAVTVSQICERYQIPFLSADNSSPSLHRRGLKFYFRAAPHDEMFSTAMFDFFDAQKKKG 180 Query: 181 QKIETLALFHEDTIFGTDSANAQTKLAGERGYKIVADIKYRANSPSLTAEVQQLKAANAD 240 +KIETLALFHEDTIFGTDSANAQ KLA ERGYK+VADIKYRANSPSLTAEVQQLKAA+AD Sbjct: 181 EKIETLALFHEDTIFGTDSANAQLKLAKERGYKVVADIKYRANSPSLTAEVQQLKAADAD 240 Query: 241 VLMPSSYTTDAILLVKTMAELGYKPKNIMAQDAGFSEKATYDAVGDKLEGVISRGSFSLD 300 VLMPSSYTTD ILL+KTM ELGYK KNI+AQDAGFSEKA YDAVGDK+ GVISRGSFSLD Sbjct: 241 VLMPSSYTTDGILLIKTMGELGYKAKNIVAQDAGFSEKALYDAVGDKIPGVISRGSFSLD 300 Query: 301 LAQKRPMVGLINEMYRAKSGKDFNDYSSRQFMGLIVMADAINRAKSTDGEKIREALVATD 360 LA KRPMVG IN++Y+AKSGKDFNDYSSRQFMGLIVMADAINRAKSTDG+KIREALVATD Sbjct: 301 LAAKRPMVGKINDLYKAKSGKDFNDYSSRQFMGLIVMADAINRAKSTDGDKIREALVATD 360 Query: 361 MPGDQTIMPWRRVKFDEMGQNNFADPVLLQYSAKNFVTIFPEQAAVSEAIWPM 413 +PGDQTIMPW+RVKFDEMGQNNFADPVLLQY+ FVTI P QAAV+EA+WPM Sbjct: 361 LPGDQTIMPWKRVKFDEMGQNNFADPVLLQYNGGKFVTIAPPQAAVAEAVWPM 413 >ref|NP_769562.1| ABC transporter amino acid-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC48187.1| ABC transporter amino acid-binding protein [Bradyrhizobium japonicum USDA 110] Length = 444 Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/413 (84%), Positives = 380/413 (92%) Query: 1 MTISRRNVLLGATAAAALGPMAARAQASEVAIGVIYPLSGASAQIGVDAQRAFETAADII 60 MTISRR+VLLGATA AAL P+AARAQ SEV IGVIYP SG SAQ GVDAQ+A+ETA ++I Sbjct: 31 MTISRRDVLLGATATAALVPLAARAQTSEVVIGVIYPFSGGSAQQGVDAQKAYETALEVI 90 Query: 61 NKNYDFALPLAKGEGLSGLGGAKVKLVFADHQADPQKGRAEAERLITQEKVCAVIGTYQS 120 NK+ DF LPLAKGEGL GLGGAKV+LVFADHQADPQKGRAEAERLITQEKV A+IGTYQS Sbjct: 91 NKDTDFDLPLAKGEGLPGLGGAKVRLVFADHQADPQKGRAEAERLITQEKVSAIIGTYQS 150 Query: 121 AVAVTVSQICERYGVPFLSADNSSPSLHRRGLKYYFRASPHDEMFSTAMFDFFDAMKKKG 180 AVAVTVSQICERY +PF+SADNSSPSLHRRGLKYYFRA+PHDEM+S AMFDFFDAMKKKG Sbjct: 151 AVAVTVSQICERYQIPFVSADNSSPSLHRRGLKYYFRAAPHDEMYSAAMFDFFDAMKKKG 210 Query: 181 QKIETLALFHEDTIFGTDSANAQTKLAGERGYKIVADIKYRANSPSLTAEVQQLKAANAD 240 KIETL+LFHEDTIFGTDS NAQ K+AGER YKIV DIKYRANSPSL+AEVQQLK ANAD Sbjct: 211 TKIETLSLFHEDTIFGTDSGNAQAKIAGERAYKIVTDIKYRANSPSLSAEVQQLKTANAD 270 Query: 241 VLMPSSYTTDAILLVKTMAELGYKPKNIMAQDAGFSEKATYDAVGDKLEGVISRGSFSLD 300 VLMPSSYTTD ILLVKTMAELGYKP I+AQDAGFSEKA YDAVGDKLEGVISRG+FSLD Sbjct: 271 VLMPSSYTTDGILLVKTMAELGYKPNAIVAQDAGFSEKALYDAVGDKLEGVISRGTFSLD 330 Query: 301 LAQKRPMVGLINEMYRAKSGKDFNDYSSRQFMGLIVMADAINRAKSTDGEKIREALVATD 360 LAQKRPMVG INEM++A+SGKDFND +SRQFMGLI++ADAI+RAKSTDGEK+R+AL ATD Sbjct: 331 LAQKRPMVGKINEMFKARSGKDFNDLTSRQFMGLIILADAISRAKSTDGEKVRDALAATD 390 Query: 361 MPGDQTIMPWRRVKFDEMGQNNFADPVLLQYSAKNFVTIFPEQAAVSEAIWPM 413 +PG+QTIMPW+RVKFDEMGQNN ADPVLLQY FVTIFP QAA++EAIWPM Sbjct: 391 IPGEQTIMPWKRVKFDEMGQNNDADPVLLQYVGGKFVTIFPPQAAIAEAIWPM 443 >ref|YP_001990946.1| branched-chain amino acid ABC transporter substrate-binding protein [Rhodopseudomonas palustris TIE-1] gb|ACF00471.1| Extracellular ligand-binding receptor [Rhodopseudomonas palustris TIE-1] Length = 415 Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/414 (84%), Positives = 379/414 (91%), Gaps = 1/414 (0%) Query: 1 MTISRRNVLLGATAAAALGPMA-ARAQASEVAIGVIYPLSGASAQIGVDAQRAFETAADI 59 M I+RRN++LG A+AAL P A ARA+ EV IGVIYPLSG+SAQIGVDAQ+AF+TAA++ Sbjct: 1 MKINRRNLVLGGAASAALLPFATARAETKEVVIGVIYPLSGSSAQIGVDAQKAFQTAAEL 60 Query: 60 INKNYDFALPLAKGEGLSGLGGAKVKLVFADHQADPQKGRAEAERLITQEKVCAVIGTYQ 119 IN YDF LPLA+GEGL GLGGAKV+LVFADHQADPQKGRAEAERLITQEKVCA++GTYQ Sbjct: 61 INNKYDFDLPLARGEGLPGLGGAKVRLVFADHQADPQKGRAEAERLITQEKVCAIVGTYQ 120 Query: 120 SAVAVTVSQICERYGVPFLSADNSSPSLHRRGLKYYFRASPHDEMFSTAMFDFFDAMKKK 179 SAVAVTVSQ+CERY VPFLSADNSSPSLHRRGLKYYFR +PHDEMFS AMFDFFDA+KKK Sbjct: 121 SAVAVTVSQVCERYQVPFLSADNSSPSLHRRGLKYYFRPAPHDEMFSQAMFDFFDALKKK 180 Query: 180 GQKIETLALFHEDTIFGTDSANAQTKLAGERGYKIVADIKYRANSPSLTAEVQQLKAANA 239 GQKIETLALFHEDTIFGTDS+NAQ KLA ERGYKI ADIKYRANSPSLTAEVQQLKAA+A Sbjct: 181 GQKIETLALFHEDTIFGTDSSNAQLKLAQERGYKIAADIKYRANSPSLTAEVQQLKAADA 240 Query: 240 DVLMPSSYTTDAILLVKTMAELGYKPKNIMAQDAGFSEKATYDAVGDKLEGVISRGSFSL 299 DVLMPSSYTTD ILL++TM ELGYK KNI+AQDAGFSEKA YDAVGDK+ GVISRGSFS+ Sbjct: 241 DVLMPSSYTTDGILLIRTMGELGYKAKNIVAQDAGFSEKALYDAVGDKIPGVISRGSFSI 300 Query: 300 DLAQKRPMVGLINEMYRAKSGKDFNDYSSRQFMGLIVMADAINRAKSTDGEKIREALVAT 359 DLAQKRPMVG IN+MY+ KSGKDFNDYSSRQFMGLIVMADAINRAKSTDGEKIREAL AT Sbjct: 301 DLAQKRPMVGKINDMYKEKSGKDFNDYSSRQFMGLIVMADAINRAKSTDGEKIREALAAT 360 Query: 360 DMPGDQTIMPWRRVKFDEMGQNNFADPVLLQYSAKNFVTIFPEQAAVSEAIWPM 413 DMPG+QTIMPW RVKFDE GQN FADPVLLQY FVTIFP QAAV++AIWPM Sbjct: 361 DMPGEQTIMPWSRVKFDETGQNTFADPVLLQYVGGKFVTIFPTQAAVADAIWPM 414 >ref|NP_947093.1| putative branched-chain amino acid transport system substrate-binding protein [Rhodopseudomonas palustris CGA009] emb|CAE27189.1| putative branched-chain amino acid transport system substrate-binding protein [Rhodopseudomonas palustris CGA009] Length = 415 Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/414 (84%), Positives = 379/414 (91%), Gaps = 1/414 (0%) Query: 1 MTISRRNVLLGATAAAALGPMA-ARAQASEVAIGVIYPLSGASAQIGVDAQRAFETAADI 59 M I+RRN++LG A+AAL P A ARA+ EV IGVIYPLSG+SAQIGVDAQ+AF+TAA++ Sbjct: 1 MKINRRNLVLGGAASAALLPFATARAETKEVVIGVIYPLSGSSAQIGVDAQKAFQTAAEL 60 Query: 60 INKNYDFALPLAKGEGLSGLGGAKVKLVFADHQADPQKGRAEAERLITQEKVCAVIGTYQ 119 IN YDF LPLA+GEGL GLGGAKV+LVFADHQADPQKGRAEAERLITQEKVCA++GTYQ Sbjct: 61 INNKYDFDLPLARGEGLPGLGGAKVRLVFADHQADPQKGRAEAERLITQEKVCAIVGTYQ 120 Query: 120 SAVAVTVSQICERYGVPFLSADNSSPSLHRRGLKYYFRASPHDEMFSTAMFDFFDAMKKK 179 SAVAVTVSQ+CERY VPFLSADNSSPSLHRRGLKYYFR +PHDEMFS AMFDFFDA+KKK Sbjct: 121 SAVAVTVSQVCERYQVPFLSADNSSPSLHRRGLKYYFRPAPHDEMFSQAMFDFFDALKKK 180 Query: 180 GQKIETLALFHEDTIFGTDSANAQTKLAGERGYKIVADIKYRANSPSLTAEVQQLKAANA 239 GQKIETLALFHEDTIFGTDS+NAQ KLA ERGYKI ADIKYRANSPSLTAEVQQLKAA+A Sbjct: 181 GQKIETLALFHEDTIFGTDSSNAQLKLAQERGYKIAADIKYRANSPSLTAEVQQLKAADA 240 Query: 240 DVLMPSSYTTDAILLVKTMAELGYKPKNIMAQDAGFSEKATYDAVGDKLEGVISRGSFSL 299 DVLMPSSYTTD ILL++TM ELGYK KNI+AQDAGFSEKA YDAVGDK+ GVISRGSFS+ Sbjct: 241 DVLMPSSYTTDGILLIRTMGELGYKAKNIVAQDAGFSEKALYDAVGDKIPGVISRGSFSI 300 Query: 300 DLAQKRPMVGLINEMYRAKSGKDFNDYSSRQFMGLIVMADAINRAKSTDGEKIREALVAT 359 DLAQKRPMVG IN+MY+ KSGKDFNDYSSRQFMGLIVMADAINRAKSTDGEKIR+AL AT Sbjct: 301 DLAQKRPMVGKINDMYKEKSGKDFNDYSSRQFMGLIVMADAINRAKSTDGEKIRDALAAT 360 Query: 360 DMPGDQTIMPWRRVKFDEMGQNNFADPVLLQYSAKNFVTIFPEQAAVSEAIWPM 413 DMPG+QTIMPW RVKFDE GQN FADPVLLQY FVTIFP QAAV++AIWPM Sbjct: 361 DMPGEQTIMPWSRVKFDETGQNTFADPVLLQYVGGKFVTIFPTQAAVADAIWPM 414 >ref|YP_004110081.1| extracellular ligand-binding receptor [Rhodopseudomonas palustris DX-1] gb|ADU45348.1| Extracellular ligand-binding receptor [Rhodopseudomonas palustris DX-1] Length = 415 Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/414 (84%), Positives = 379/414 (91%), Gaps = 1/414 (0%) Query: 1 MTISRRNVLLGATAAAALGPMA-ARAQASEVAIGVIYPLSGASAQIGVDAQRAFETAADI 59 M I+RRN++LG+ A+AAL P A ARA+ EV IGVIYPLSG+SAQIGVDAQ+AF+TAA++ Sbjct: 1 MKINRRNLVLGSAASAALLPFATARAETKEVVIGVIYPLSGSSAQIGVDAQKAFQTAAEL 60 Query: 60 INKNYDFALPLAKGEGLSGLGGAKVKLVFADHQADPQKGRAEAERLITQEKVCAVIGTYQ 119 IN YD+ LPLA+GEGL GLGGAK++LVFADHQADPQKGRAEAERLITQEKV A+IGTYQ Sbjct: 61 INNKYDYDLPLARGEGLPGLGGAKIRLVFADHQADPQKGRAEAERLITQEKVSAIIGTYQ 120 Query: 120 SAVAVTVSQICERYGVPFLSADNSSPSLHRRGLKYYFRASPHDEMFSTAMFDFFDAMKKK 179 SAVAVTVSQICERY VPFLSADNSSPSLHRRGLKYYFR +PHDEMFS AMFDFFDA+KKK Sbjct: 121 SAVAVTVSQICERYQVPFLSADNSSPSLHRRGLKYYFRPAPHDEMFSQAMFDFFDALKKK 180 Query: 180 GQKIETLALFHEDTIFGTDSANAQTKLAGERGYKIVADIKYRANSPSLTAEVQQLKAANA 239 GQKIETLALFHEDTIFGTDS+NAQ KLA ERGYKI ADIKYRANSPSLTAEVQQLKAANA Sbjct: 181 GQKIETLALFHEDTIFGTDSSNAQLKLAQERGYKIAADIKYRANSPSLTAEVQQLKAANA 240 Query: 240 DVLMPSSYTTDAILLVKTMAELGYKPKNIMAQDAGFSEKATYDAVGDKLEGVISRGSFSL 299 DVLMPSSYTTD ILL++TM ELGYK KNI+AQDAGFSEKA YDAVGDK+ GVISRGSFS+ Sbjct: 241 DVLMPSSYTTDGILLIRTMGELGYKAKNIVAQDAGFSEKALYDAVGDKIPGVISRGSFSI 300 Query: 300 DLAQKRPMVGLINEMYRAKSGKDFNDYSSRQFMGLIVMADAINRAKSTDGEKIREALVAT 359 DLAQKRPMVG IN+MY+ KSGKDFNDYSSRQFMGLIVMADAINRAKSTDGEKIREAL AT Sbjct: 301 DLAQKRPMVGKINDMYKEKSGKDFNDYSSRQFMGLIVMADAINRAKSTDGEKIREALAAT 360 Query: 360 DMPGDQTIMPWRRVKFDEMGQNNFADPVLLQYSAKNFVTIFPEQAAVSEAIWPM 413 DMPG+QTIMPW RVKFDE GQN FADPVLLQY FVTIFP QAAV++AIWPM Sbjct: 361 DMPGEQTIMPWSRVKFDETGQNTFADPVLLQYVGGKFVTIFPTQAAVADAIWPM 414