BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0243.0006.p         (231 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001238921.1| high-affinity branched-chain amino acid ABC ...   432   e-119
ref|YP_001204600.1| high-affinity branched-chain amino acid ABC ...   426   e-118
ref|NP_769566.1| amino acid ABC transporter ATP-binding protein ...   421   e-116
ref|YP_568988.1| ABC transporter-like protein [Rhodopseudomonas ...   407   e-112
ref|YP_487222.1| ABC transporter related [Rhodopseudomonas palus...   407   e-112

>ref|YP_001238921.1| high-affinity branched-chain amino acid ABC transporter ATP-binding
           protein [Bradyrhizobium sp. BTAi1]
 gb|ABQ35015.1| amino acid/amide ABC transporter ATP-binding protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 234

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 213/231 (92%), Positives = 222/231 (96%)

Query: 1   VREVTTAYQGLVAISSVSIDVIKGEIVCVAGANGAGKSTLLKSIAGAERPRAGTVTFDGK 60
           VR+VTTAYQGLVAIS+VSIDV KGEIVCVAGANGAGKSTLLKSIAGAERPRAG+VTFDG 
Sbjct: 4   VRDVTTAYQGLVAISNVSIDVEKGEIVCVAGANGAGKSTLLKSIAGAERPRAGSVTFDGN 63

Query: 61  RIDGQPQHVITSSGIAYVPENRRLFPRLSVRDNLRLGSYLYRSQSDRDAPLDLVFKLFPR 120
           RIDG  QH+IT+ GIAYVPENRRLFPRLSVRDNLRLGSYLYRS+++RD PLD VFKLFPR
Sbjct: 64  RIDGMAQHLITAKGIAYVPENRRLFPRLSVRDNLRLGSYLYRSEANRDEPLDFVFKLFPR 123

Query: 121 LGERLDQRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLVDEIFQAVKRIRDA 180
           L ERL+QRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLVDEIFQAVKRIRDA
Sbjct: 124 LSERLEQRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLVDEIFQAVKRIRDA 183

Query: 181 GMTVLIVEQRMAECLEIADRAYILQTGRVLMQGTAAEISGNPDVRKAYLGL 231
           GMTVLIVEQRMAECLEIADRAYILQTGRVLMQGTAAEISGN DVRKAYLGL
Sbjct: 184 GMTVLIVEQRMAECLEIADRAYILQTGRVLMQGTAAEISGNKDVRKAYLGL 234


>ref|YP_001204600.1| high-affinity branched-chain amino acid ABC transporter ATP-binding
           protein [Bradyrhizobium sp. ORS 278]
 emb|CAL76363.1| high-affinity branched-chain amino acid transport protein (ABC
           transporter ATP-binding protein) [Bradyrhizobium sp. ORS
           278]
          Length = 234

 Score =  426 bits (1096), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/231 (90%), Positives = 221/231 (95%)

Query: 1   VREVTTAYQGLVAISSVSIDVIKGEIVCVAGANGAGKSTLLKSIAGAERPRAGTVTFDGK 60
           VR+VTTAYQGLVAIS+VSIDV KGEIVCVAGANGAGKSTLLKSIAGAERPRAG+VTFDG 
Sbjct: 4   VRDVTTAYQGLVAISNVSIDVEKGEIVCVAGANGAGKSTLLKSIAGAERPRAGSVTFDGH 63

Query: 61  RIDGQPQHVITSSGIAYVPENRRLFPRLSVRDNLRLGSYLYRSQSDRDAPLDLVFKLFPR 120
           RIDG  QH+IT+ GIAYVPENRRLFPRLSVRDNLRLGSYLYRS+++R+ PL+  FKLFPR
Sbjct: 64  RIDGMAQHLITAKGIAYVPENRRLFPRLSVRDNLRLGSYLYRSEANREEPLEFAFKLFPR 123

Query: 121 LGERLDQRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLVDEIFQAVKRIRDA 180
           L ERL+QRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLVDEIFQAVK+IRDA
Sbjct: 124 LSERLEQRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLVDEIFQAVKKIRDA 183

Query: 181 GMTVLIVEQRMAECLEIADRAYILQTGRVLMQGTAAEISGNPDVRKAYLGL 231
           GMTVLIVEQRMAECLEIADRAYILQTGRVLMQGTAAEISGN DVRKAYLGL
Sbjct: 184 GMTVLIVEQRMAECLEIADRAYILQTGRVLMQGTAAEISGNKDVRKAYLGL 234


>ref|NP_769566.1| amino acid ABC transporter ATP-binding protein [Bradyrhizobium
           japonicum USDA 110]
 dbj|BAC48191.1| amino acid ABC transporter ATP-binding protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 234

 Score =  421 bits (1082), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 207/231 (89%), Positives = 219/231 (94%)

Query: 1   VREVTTAYQGLVAISSVSIDVIKGEIVCVAGANGAGKSTLLKSIAGAERPRAGTVTFDGK 60
           V EVTTAYQGLVAIS+VSI+V KGEIVCVAGANGAGKSTLLKSIAGAERPR+GTVTFDGK
Sbjct: 4   VHEVTTAYQGLVAISAVSIEVEKGEIVCVAGANGAGKSTLLKSIAGAERPRSGTVTFDGK 63

Query: 61  RIDGQPQHVITSSGIAYVPENRRLFPRLSVRDNLRLGSYLYRSQSDRDAPLDLVFKLFPR 120
           R+DG  QH IT++GIAYVPENRRLFPRLSVRDNLRLGSYLYR +++R+ PLDLVF LFPR
Sbjct: 64  RLDGMAQHHITATGIAYVPENRRLFPRLSVRDNLRLGSYLYRGEANREGPLDLVFNLFPR 123

Query: 121 LGERLDQRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLVDEIFQAVKRIRDA 180
           L ERL+QRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLVDEIFQAV RIRDA
Sbjct: 124 LQERLEQRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLVDEIFQAVLRIRDA 183

Query: 181 GMTVLIVEQRMAECLEIADRAYILQTGRVLMQGTAAEISGNPDVRKAYLGL 231
           GMTVLIVEQRMAECLEIADRAYILQTGRVLMQG A+EI GNPDVRKAYLGL
Sbjct: 184 GMTVLIVEQRMAECLEIADRAYILQTGRVLMQGAASEIKGNPDVRKAYLGL 234


>ref|YP_568988.1| ABC transporter-like protein [Rhodopseudomonas palustris BisB5]
 gb|ABE39087.1| ABC transporter related [Rhodopseudomonas palustris BisB5]
          Length = 234

 Score =  407 bits (1046), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/231 (86%), Positives = 215/231 (93%)

Query: 1   VREVTTAYQGLVAISSVSIDVIKGEIVCVAGANGAGKSTLLKSIAGAERPRAGTVTFDGK 60
           VREVTTAY+GLVAIS VSI+V KGEIVCVAGANGAGKSTLLKSIAGAERPR+G V+FDG+
Sbjct: 4   VREVTTAYKGLVAISQVSIEVEKGEIVCVAGANGAGKSTLLKSIAGAERPRSGQVSFDGE 63

Query: 61  RIDGQPQHVITSSGIAYVPENRRLFPRLSVRDNLRLGSYLYRSQSDRDAPLDLVFKLFPR 120
           RIDG  QH+IT+ GIAYVPENRRLFPRLSV DNLRLGSYL+R + DR+ PL+LVF LFPR
Sbjct: 64  RIDGTAQHLITARGIAYVPENRRLFPRLSVHDNLRLGSYLFRGKVDREQPLELVFSLFPR 123

Query: 121 LGERLDQRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLVDEIFQAVKRIRDA 180
           L ERL+QRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLV EIFQAVK+IRDA
Sbjct: 124 LKERLEQRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLVSEIFQAVKKIRDA 183

Query: 181 GMTVLIVEQRMAECLEIADRAYILQTGRVLMQGTAAEISGNPDVRKAYLGL 231
           GMTVLIVEQRMAECLEIADRAYILQTGRVLMQG +AE+  NPDVRKAYLGL
Sbjct: 184 GMTVLIVEQRMAECLEIADRAYILQTGRVLMQGKSAELMDNPDVRKAYLGL 234


>ref|YP_487222.1| ABC transporter related [Rhodopseudomonas palustris HaA2]
 gb|ABD08311.1| ABC transporter related [Rhodopseudomonas palustris HaA2]
          Length = 234

 Score =  407 bits (1046), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 199/231 (86%), Positives = 216/231 (93%)

Query: 1   VREVTTAYQGLVAISSVSIDVIKGEIVCVAGANGAGKSTLLKSIAGAERPRAGTVTFDGK 60
           VR+VTTAY+GLVAIS VSI+V KGEIVCVAGANGAGKSTLLKSIAGAERPR+G V+FDG+
Sbjct: 4   VRDVTTAYKGLVAISQVSIEVEKGEIVCVAGANGAGKSTLLKSIAGAERPRSGQVSFDGE 63

Query: 61  RIDGQPQHVITSSGIAYVPENRRLFPRLSVRDNLRLGSYLYRSQSDRDAPLDLVFKLFPR 120
           RIDG PQH+IT+ GIAYVPENRRLFPRLSV DNLRLGSYL+R + DR+ PL+LVF LFPR
Sbjct: 64  RIDGTPQHLITARGIAYVPENRRLFPRLSVHDNLRLGSYLFRGKVDREQPLELVFSLFPR 123

Query: 121 LGERLDQRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLVDEIFQAVKRIRDA 180
           L ERL+QRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLV EIFQ+VK+IRDA
Sbjct: 124 LKERLEQRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLVSEIFQSVKKIRDA 183

Query: 181 GMTVLIVEQRMAECLEIADRAYILQTGRVLMQGTAAEISGNPDVRKAYLGL 231
           GMTVLIVEQRMAECLEIADRAYILQTGRVLMQG +AE+  NPDVRKAYLGL
Sbjct: 184 GMTVLIVEQRMAECLEIADRAYILQTGRVLMQGKSAELMDNPDVRKAYLGL 234