BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0243.0002.p (260 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769569.1| hypothetical protein blr2929 [Bradyrhizobium ja... 473 e-132 ref|YP_001204609.1| putative sugar isomerase [Bradyrhizobium sp.... 437 e-121 ref|YP_001238931.1| putative sugar isomerase [Bradyrhizobium sp.... 435 e-120 ref|YP_568991.1| hydroxypyruvate isomerase [Rhodopseudomonas pal... 408 e-112 ref|YP_487217.1| hydroxypyruvate isomerase [Rhodopseudomonas pal... 405 e-111 >ref|NP_769569.1| hypothetical protein blr2929 [Bradyrhizobium japonicum USDA 110] dbj|BAC48194.1| blr2929 [Bradyrhizobium japonicum USDA 110] Length = 260 Score = 473 bits (1218), Expect = e-132, Method: Compositional matrix adjust. Identities = 224/260 (86%), Positives = 245/260 (94%) Query: 1 MPRFAANLTMMFNEVPFLDRFDAAAKAGFTAVEFLFPYDHPAEEVGKRLKGNGLTQALFN 60 MPRFAANL+MMF +VPFLDRF+AAA+ GFTAVEFLFPY+HPAE VG+RLK NGLTQALFN Sbjct: 1 MPRFAANLSMMFTDVPFLDRFEAAAQVGFTAVEFLFPYEHPAEAVGERLKRNGLTQALFN 60 Query: 61 LPPGDWNAGEKGFAALPDRFADLQQSLKTALPYAQATGVRRVHLMAGIADRSDRRAVEAF 120 LPPGDWNAGEKGFAALP RFADL+ SL+TALPYA+ATGV+R+HLMAG+A+R +R A+EAF Sbjct: 61 LPPGDWNAGEKGFAALPARFADLKASLETALPYAKATGVKRLHLMAGLANRGERVAIEAF 120 Query: 121 YKSVANAAEFFAPHGLDVVIEPINPRNVPGYFLNDFNFAYDLISELKIPNLKLQFDIYHC 180 YKSVA AAEFFAPHG+D+V+EPIN RNVPGYFLNDF FA DLI EL++PNLKLQFDIYHC Sbjct: 121 YKSVAWAAEFFAPHGIDIVLEPINARNVPGYFLNDFGFARDLIQELRLPNLKLQFDIYHC 180 Query: 181 QIIHGDVTMRLREMMPIIGHVQIASIPSRNEPDGEELNYPFLFGELDRLGYGGFVGCEYN 240 QIIHGDVTMRLREMMPIIGH+QIASIPSRNEPDGEELNYPFLF ELDRLGY GFVGCEYN Sbjct: 181 QIIHGDVTMRLREMMPIIGHIQIASIPSRNEPDGEELNYPFLFEELDRLGYAGFVGCEYN 240 Query: 241 PRGKTTDGLAWFKPYAGVKP 260 PRGKTTDGLAWFKPYAGVKP Sbjct: 241 PRGKTTDGLAWFKPYAGVKP 260 >ref|YP_001204609.1| putative sugar isomerase [Bradyrhizobium sp. ORS 278] emb|CAL76372.1| putative sugar isomerase (interconverting aldoses and ketoses) [Bradyrhizobium sp. ORS 278] Length = 250 Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust. Identities = 215/250 (86%), Positives = 229/250 (91%) Query: 11 MFNEVPFLDRFDAAAKAGFTAVEFLFPYDHPAEEVGKRLKGNGLTQALFNLPPGDWNAGE 70 MF E PFLDRF AAAKAGFTAVEFLFPYDHP EEVGKRL GNGLTQALFNLPPG+W+AGE Sbjct: 1 MFTEHPFLDRFAAAAKAGFTAVEFLFPYDHPVEEVGKRLHGNGLTQALFNLPPGNWDAGE 60 Query: 71 KGFAALPDRFADLQQSLKTALPYAQATGVRRVHLMAGIADRSDRRAVEAFYKSVANAAEF 130 KGFAAL +RF DL+ SL+TALPYA+ATGV+R+HLMAGIADR D +AVEA+YKSVA AAEF Sbjct: 61 KGFAALLERFDDLKASLETALPYAKATGVKRLHLMAGIADRHDAKAVEAYYKSVAWAAEF 120 Query: 131 FAPHGLDVVIEPINPRNVPGYFLNDFNFAYDLISELKIPNLKLQFDIYHCQIIHGDVTMR 190 FAPHGLDVV+EPINPRNVPGYFLNDF FA DLI ELKIPNLKLQFDIYHCQIIHGDVTMR Sbjct: 121 FAPHGLDVVLEPINPRNVPGYFLNDFGFARDLIRELKIPNLKLQFDIYHCQIIHGDVTMR 180 Query: 191 LREMMPIIGHVQIASIPSRNEPDGEELNYPFLFGELDRLGYGGFVGCEYNPRGKTTDGLA 250 LREMM I GH+QIASIPSRNEPDGEELNYPFLF ELDRLGY GFVGCEYNPRG+T DGL Sbjct: 181 LREMMDITGHIQIASIPSRNEPDGEELNYPFLFAELDRLGYAGFVGCEYNPRGRTEDGLG 240 Query: 251 WFKPYAGVKP 260 WF+PY GVKP Sbjct: 241 WFEPYKGVKP 250 >ref|YP_001238931.1| putative sugar isomerase [Bradyrhizobium sp. BTAi1] gb|ABQ35025.1| putative sugar isomerase (interconverting aldoses and ketoses) [Bradyrhizobium sp. BTAi1] Length = 250 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 215/250 (86%), Positives = 228/250 (91%) Query: 11 MFNEVPFLDRFDAAAKAGFTAVEFLFPYDHPAEEVGKRLKGNGLTQALFNLPPGDWNAGE 70 MF E PFLDRF AAAKAGFTAVEFLFPYDHPAEEVGKRL+ NGLTQALFNLPPG W+AGE Sbjct: 1 MFTEHPFLDRFAAAAKAGFTAVEFLFPYDHPAEEVGKRLRDNGLTQALFNLPPGHWDAGE 60 Query: 71 KGFAALPDRFADLQQSLKTALPYAQATGVRRVHLMAGIADRSDRRAVEAFYKSVANAAEF 130 KGFAALP+RF DL+ SL+TALPYA+ATGV+R+HLMAGIADR D +AVEA+YKSVA AAEF Sbjct: 61 KGFAALPERFDDLKASLETALPYAKATGVKRLHLMAGIADRHDAKAVEAYYKSVAWAAEF 120 Query: 131 FAPHGLDVVIEPINPRNVPGYFLNDFNFAYDLISELKIPNLKLQFDIYHCQIIHGDVTMR 190 FAP+GLDVVIEPINPRNVPGYFLNDF FA DLI ELKIPNLKLQFDIYHCQIIHGDVTMR Sbjct: 121 FAPNGLDVVIEPINPRNVPGYFLNDFGFARDLIRELKIPNLKLQFDIYHCQIIHGDVTMR 180 Query: 191 LREMMPIIGHVQIASIPSRNEPDGEELNYPFLFGELDRLGYGGFVGCEYNPRGKTTDGLA 250 LREMM I GH+QIASIPSRNEPDGEELNYPFLF ELDRLGY GFVGCEYNPR +T DGL Sbjct: 181 LREMMDITGHIQIASIPSRNEPDGEELNYPFLFKELDRLGYAGFVGCEYNPRSRTEDGLG 240 Query: 251 WFKPYAGVKP 260 WF PY GVKP Sbjct: 241 WFAPYKGVKP 250 >ref|YP_568991.1| hydroxypyruvate isomerase [Rhodopseudomonas palustris BisB5] gb|ABE39090.1| Hydroxypyruvate isomerase [Rhodopseudomonas palustris BisB5] Length = 260 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 196/259 (75%), Positives = 220/259 (84%) Query: 1 MPRFAANLTMMFNEVPFLDRFDAAAKAGFTAVEFLFPYDHPAEEVGKRLKGNGLTQALFN 60 MPRFAANL++MFNE FLDRFDAAA AGFTAVEFLFPYDH E++ +RL+ N L QALFN Sbjct: 1 MPRFAANLSLMFNENAFLDRFDAAAAAGFTAVEFLFPYDHSPEDIAERLRRNNLVQALFN 60 Query: 61 LPPGDWNAGEKGFAALPDRFADLQQSLKTALPYAQATGVRRVHLMAGIADRSDRRAVEAF 120 LPPGDW AGEKGFAA PD+F LQQSL+ ALPYA ATGV+RVHLMAGIADR+D AV AF Sbjct: 61 LPPGDWAAGEKGFAARPDKFEKLQQSLRIALPYALATGVKRVHLMAGIADRNDVAAVVAF 120 Query: 121 YKSVANAAEFFAPHGLDVVIEPINPRNVPGYFLNDFNFAYDLISELKIPNLKLQFDIYHC 180 +S+A AA FFAPHG+DVVIEP+N R+VPGYFL+DF FA DLI EL +PN+KLQFD+YHC Sbjct: 121 RRSLAVAAHFFAPHGIDVVIEPLNKRDVPGYFLDDFEFARDLIRELDVPNVKLQFDVYHC 180 Query: 181 QIIHGDVTMRLREMMPIIGHVQIASIPSRNEPDGEELNYPFLFGELDRLGYGGFVGCEYN 240 QI+HGDV MRLREMMPI+GH+QIAS+PSRNEPD ELNYPFLF E DRLGY GFVG EY Sbjct: 181 QILHGDVAMRLREMMPIVGHIQIASVPSRNEPDSGELNYPFLFEEFDRLGYAGFVGAEYR 240 Query: 241 PRGKTTDGLAWFKPYAGVK 259 PRG T DGL WF PYAG + Sbjct: 241 PRGATVDGLGWFAPYAGTR 259 >ref|YP_487217.1| hydroxypyruvate isomerase [Rhodopseudomonas palustris HaA2] gb|ABD08306.1| Hydroxypyruvate isomerase [Rhodopseudomonas palustris HaA2] Length = 260 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 195/259 (75%), Positives = 220/259 (84%) Query: 1 MPRFAANLTMMFNEVPFLDRFDAAAKAGFTAVEFLFPYDHPAEEVGKRLKGNGLTQALFN 60 MPRFAANL++MFNE FLDRFDAAA AGFTAVEFLFPYDH +++ +RL+ N L QALFN Sbjct: 1 MPRFAANLSLMFNEHAFLDRFDAAAAAGFTAVEFLFPYDHRPDDIAERLRRNNLMQALFN 60 Query: 61 LPPGDWNAGEKGFAALPDRFADLQQSLKTALPYAQATGVRRVHLMAGIADRSDRRAVEAF 120 LPPGDW GEKGFAA PD+F DLQQSL TALPY ATGVRRVHLMAG+ADR D A AF Sbjct: 61 LPPGDWAGGEKGFAARPDKFEDLQQSLHTALPYVLATGVRRVHLMAGLADRHDGAAALAF 120 Query: 121 YKSVANAAEFFAPHGLDVVIEPINPRNVPGYFLNDFNFAYDLISELKIPNLKLQFDIYHC 180 +S+A AA FFAPHG+DV+IEP+N R+VPGYFL+DF FA+DLI EL+IPNL LQFD+YHC Sbjct: 121 RRSLAVAAHFFAPHGIDVLIEPLNQRDVPGYFLDDFGFAHDLIRELQIPNLMLQFDVYHC 180 Query: 181 QIIHGDVTMRLREMMPIIGHVQIASIPSRNEPDGEELNYPFLFGELDRLGYGGFVGCEYN 240 QI+HGDV MRLREMMP IGH+QIAS+PSR+EPDGEELNYPFLF ELDRLGY GFVG EY Sbjct: 181 QILHGDVVMRLREMMPTIGHIQIASVPSRHEPDGEELNYPFLFAELDRLGYAGFVGAEYR 240 Query: 241 PRGKTTDGLAWFKPYAGVK 259 PRG T DGL WF P+AG + Sbjct: 241 PRGATLDGLGWFAPFAGAR 259