BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0243.0001.p (429 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769570.1| hypothetical protein blr2930 [Bradyrhizobium ja... 700 0.0 ref|ZP_08629429.1| putative pyridoxine biosynthesis protein [Bra... 648 0.0 ref|YP_001204610.1| hypothetical protein BRADO2553 [Bradyrhizobi... 634 e-180 ref|YP_568992.1| Hrp-dependent type III effector protein [Rhodop... 612 e-173 ref|YP_001238932.1| hypothetical protein BBta_2899 [Bradyrhizobi... 582 e-164 >ref|NP_769570.1| hypothetical protein blr2930 [Bradyrhizobium japonicum USDA 110] dbj|BAC48195.1| blr2930 [Bradyrhizobium japonicum USDA 110] Length = 424 Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/423 (83%), Positives = 385/423 (91%), Gaps = 1/423 (0%) Query: 6 NLSLGCIADDYTGASDLANTLTRAGLRTVQTIGVPADDLALPEVDAVVVSLKSRSIEAGL 65 L+LGCIADDYTGASDLANTLTRAGLRTVQTIG+PADDLALPEVDAVVVSLKSRSIEAGL Sbjct: 2 TLALGCIADDYTGASDLANTLTRAGLRTVQTIGIPADDLALPEVDAVVVSLKSRSIEAGL 61 Query: 66 AVTRSRAAEAWLRGRGAKHILFKICSTFDSTDAGNIGPVMDALRADSSDAIVLVTPAFPE 125 AV+RSRAAE WLRGRGA H+LFKICSTFDSTDAGNIGPVMDALR D + IVLVTPAFPE Sbjct: 62 AVSRSRAAETWLRGRGASHVLFKICSTFDSTDAGNIGPVMDALRDDCGEGIVLVTPAFPE 121 Query: 126 TGRTVYQGNLFVGSVPLNESPLKDHPLNPMHDSNLVRVLARQSTTKVGLVDLATLSRGAD 185 TGRTVYQGNLFVG+VPLNESPLKDHPLNPMHDS+LVRVLARQS T++GLVDLA ++RGAD Sbjct: 122 TGRTVYQGNLFVGAVPLNESPLKDHPLNPMHDSSLVRVLARQSRTQIGLVDLAAVTRGAD 181 Query: 186 AVRAKLAELAQSGIGAAIVDAVFDRDLETIGQVALDHRLSVGASGIGLGLARALVATSKA 245 AVRA+LAELA GIGAAI+DAVFDRDLETIG VA ++RLSVGASGIGLGLARALV+T K Sbjct: 182 AVRARLAELAGKGIGAAIIDAVFDRDLETIGLVAAEYRLSVGASGIGLGLARALVSTGKV 241 Query: 246 KPDTADAMLATPVGGPAACLAGSCSQATLRQIANAEKVMPVLHLDPEQVIAGRDEARRAL 305 K + A VGGPAACLAGSCSQATL+QIA+AE+VMPV HLDP++++ G DEA+RAL Sbjct: 242 KSNAAGGESGAAVGGPAACLAGSCSQATLKQIASAEQVMPVFHLDPDRILTGADEAQRAL 301 Query: 306 TWAKDQLGSGPILIASSSTPDEVAALQSRHGRDAAGHAIEQAMADIAEGLVQSGVHRLVV 365 WA+ +L GP+LIASSSTPD+VAALQ+RHGRDAAGHAIEQAMADIAE LV+SGV RLVV Sbjct: 302 DWARPRLAEGPVLIASSSTPDQVAALQARHGRDAAGHAIEQAMADIAENLVKSGVRRLVV 361 Query: 366 AGGETSGAVVDRLGIPGFLVGAEIAAGVPVLRAVGAKNGEMVLALKSGNFGGPEFFSDAL 425 AGGETSGAVVDRL IPGFLVG EIAAGVPVLRAVGA G+M+LALKSGNFGGPEFFSDAL Sbjct: 362 AGGETSGAVVDRLRIPGFLVGVEIAAGVPVLRAVGA-GGDMLLALKSGNFGGPEFFSDAL 420 Query: 426 ALM 428 LM Sbjct: 421 RLM 423 >ref|ZP_08629429.1| putative pyridoxine biosynthesis protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07922.1| putative pyridoxine biosynthesis protein [Bradyrhizobiaceae bacterium SG-6C] Length = 424 Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/423 (76%), Positives = 365/423 (86%), Gaps = 1/423 (0%) Query: 6 NLSLGCIADDYTGASDLANTLTRAGLRTVQTIGVPADDLALPEVDAVVVSLKSRSIEAGL 65 L+LGCIADDYTGASDLAN LTR GLRTVQTIGVPAD L +P+VDAVV+SLKSRSIEA Sbjct: 2 TLALGCIADDYTGASDLANMLTRCGLRTVQTIGVPADSLQIPDVDAVVISLKSRSIEASQ 61 Query: 66 AVTRSRAAEAWLRGRGAKHILFKICSTFDSTDAGNIGPVMDALRADSSDAIVLVTPAFPE 125 AV RSR A+ WLR RGA H+LFKICSTFDSTDAGNIGPVMDALRAD+ DAIVLVTPAFP Sbjct: 62 AVARSREADKWLRARGASHVLFKICSTFDSTDAGNIGPVMDALRADAGDAIVLVTPAFPG 121 Query: 126 TGRTVYQGNLFVGSVPLNESPLKDHPLNPMHDSNLVRVLARQSTTKVGLVDLATLSRGAD 185 TGRTVYQGNLFVG++PLNESPLKDHPLNPMHD+NLVRVL RQS ++VGLVDLAT+++GAD Sbjct: 122 TGRTVYQGNLFVGNLPLNESPLKDHPLNPMHDANLVRVLGRQSQSRVGLVDLATVAKGAD 181 Query: 186 AVRAKLAELAQSGIGAAIVDAVFDRDLETIGQVALDHRLSVGASGIGLGLARALVATSKA 245 A+RA+LAELA+ G AAI+D+VFD +LETIG+VALDHRLSVGASG+GLGLAR LVA+ + Sbjct: 182 AIRARLAELAKHGANAAIIDSVFDPELETIGEVALDHRLSVGASGMGLGLARGLVASGRV 241 Query: 246 KPDTADAMLATPVGGPAACLAGSCSQATLRQIANAEKVMPVLHLDPEQVIAGRDEARRAL 305 TA + +GGP ACLAGSCSQATL QIA AEK MPVL LDP++++ G E RAL Sbjct: 242 TAATASSDRKA-IGGPVACLAGSCSQATLAQIAQAEKSMPVLRLDPDRIVKGEGETERAL 300 Query: 306 TWAKDQLGSGPILIASSSTPDEVAALQSRHGRDAAGHAIEQAMADIAEGLVQSGVHRLVV 365 WA+D LG GP+LIASSSTPD+V+ALQ++HGRDAAGHAIEQ MA I+EGL +GV RLVV Sbjct: 301 GWARDHLGKGPVLIASSSTPDQVSALQAKHGRDAAGHAIEQTMAAISEGLAAAGVRRLVV 360 Query: 366 AGGETSGAVVDRLGIPGFLVGAEIAAGVPVLRAVGAKNGEMVLALKSGNFGGPEFFSDAL 425 AGGETSGAVVDRLGIP FLVG EIAAGVPVLR VG G+ VLALKSGNFGGP+FF+DA+ Sbjct: 361 AGGETSGAVVDRLGIPAFLVGPEIAAGVPVLRCVGWSKGDAVLALKSGNFGGPDFFNDAI 420 Query: 426 ALM 428 LM Sbjct: 421 RLM 423 >ref|YP_001204610.1| hypothetical protein BRADO2553 [Bradyrhizobium sp. ORS 278] emb|CAL76373.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 425 Score = 634 bits (1635), Expect = e-180, Method: Compositional matrix adjust. Identities = 320/423 (75%), Positives = 355/423 (83%) Query: 6 NLSLGCIADDYTGASDLANTLTRAGLRTVQTIGVPADDLALPEVDAVVVSLKSRSIEAGL 65 L LGCIADDYTGASDLANTLTRAGLRTVQTIGVPADDLALPEVDAVVVSLKSRSIEA L Sbjct: 2 TLKLGCIADDYTGASDLANTLTRAGLRTVQTIGVPADDLALPEVDAVVVSLKSRSIEASL 61 Query: 66 AVTRSRAAEAWLRGRGAKHILFKICSTFDSTDAGNIGPVMDALRADSSDAIVLVTPAFPE 125 AV RSR A+ WLR RGA+H+LFKICSTFDSTDAGNIGPVMDAL D+ D IVLVTPAFPE Sbjct: 62 AVARSREADTWLRARGARHVLFKICSTFDSTDAGNIGPVMDALAGDAGDGIVLVTPAFPE 121 Query: 126 TGRTVYQGNLFVGSVPLNESPLKDHPLNPMHDSNLVRVLARQSTTKVGLVDLATLSRGAD 185 T RTVYQGNLFVG VPLNESPLKDHPLNPMHD+NLVRVL RQS KVGLVDLAT+ G + Sbjct: 122 TKRTVYQGNLFVGPVPLNESPLKDHPLNPMHDANLVRVLGRQSRRKVGLVDLATVVHGPE 181 Query: 186 AVRAKLAELAQSGIGAAIVDAVFDRDLETIGQVALDHRLSVGASGIGLGLARALVATSKA 245 A+ +L EL+ IGAAIVDAVFD DL IG AL ++SVGASGIGLGLARALV+ Sbjct: 182 AIGHRLQELSGQDIGAAIVDAVFDADLTAIGAAALKSKVSVGASGIGLGLARALVSAGHV 241 Query: 246 KPDTADAMLATPVGGPAACLAGSCSQATLRQIANAEKVMPVLHLDPEQVIAGRDEARRAL 305 PVGG AACLAGSCSQATL+QIA AE +MPVLHLD ++AG E +RAL Sbjct: 242 HSHGLIHHHDAPVGGMAACLAGSCSQATLQQIAQAEAIMPVLHLDAAGLVAGSGETQRAL 301 Query: 306 TWAKDQLGSGPILIASSSTPDEVAALQSRHGRDAAGHAIEQAMADIAEGLVQSGVHRLVV 365 WA++++ GP+LIASS+TPD+V+ALQ+RHGR+ AGHAIEQAMAD+AE L+ +GV RLVV Sbjct: 302 AWARERISKGPVLIASSATPDQVSALQARHGRETAGHAIEQAMADLAEALINAGVRRLVV 361 Query: 366 AGGETSGAVVDRLGIPGFLVGAEIAAGVPVLRAVGAKNGEMVLALKSGNFGGPEFFSDAL 425 AGGETSGAVVDRL IPGFLVG EIAAGVPVLRA+GA+ GEM+LALKSGNFGGP FF+DAL Sbjct: 362 AGGETSGAVVDRLRIPGFLVGTEIAAGVPVLRAIGAEAGEMLLALKSGNFGGPHFFADAL 421 Query: 426 ALM 428 LM Sbjct: 422 GLM 424 >ref|YP_568992.1| Hrp-dependent type III effector protein [Rhodopseudomonas palustris BisB5] gb|ABE39091.1| type III effector Hrp-dependent outers [Rhodopseudomonas palustris BisB5] Length = 425 Score = 612 bits (1578), Expect = e-173, Method: Compositional matrix adjust. Identities = 311/424 (73%), Positives = 355/424 (83%) Query: 6 NLSLGCIADDYTGASDLANTLTRAGLRTVQTIGVPADDLALPEVDAVVVSLKSRSIEAGL 65 L+LGCIADDYTGASDLANTLTR GLRTVQTIGVPADDLALPEVDAVVVSLKSRSI A Sbjct: 2 TLALGCIADDYTGASDLANTLTRQGLRTVQTIGVPADDLALPEVDAVVVSLKSRSIAADQ 61 Query: 66 AVTRSRAAEAWLRGRGAKHILFKICSTFDSTDAGNIGPVMDALRADSSDAIVLVTPAFPE 125 AV ++RAAE WLRGRGA H+LFKICSTFDSTD GNIGPVMDALRAD+ DA+VLVTPAFPE Sbjct: 62 AVAKARAAEQWLRGRGAAHVLFKICSTFDSTDQGNIGPVMDALRADAGDAMVLVTPAFPE 121 Query: 126 TGRTVYQGNLFVGSVPLNESPLKDHPLNPMHDSNLVRVLARQSTTKVGLVDLATLSRGAD 185 TGRTVYQG+LFVG+ PLNESPLKDHPLNPM D NLVRVLARQS TK+ L DL+ +++G Sbjct: 122 TGRTVYQGHLFVGASPLNESPLKDHPLNPMLDPNLVRVLARQSHTKISLADLSVIAQGPA 181 Query: 186 AVRAKLAELAQSGIGAAIVDAVFDRDLETIGQVALDHRLSVGASGIGLGLARALVATSKA 245 A+R L +LA G+GA + DAVF+RDLETIG VAL HR+SVGASG+GLGLARALV + Sbjct: 182 ALRKHLDDLATRGVGAVVADAVFERDLETIGAVALAHRVSVGASGLGLGLARALVGAGRV 241 Query: 246 KPDTADAMLATPVGGPAACLAGSCSQATLRQIANAEKVMPVLHLDPEQVIAGRDEARRAL 305 + + A+A +GG AACL GSCS+ATL Q+A+AE+ MPVL LDP ++AG EA+RA Sbjct: 242 ELNHAEASDRESIGGFAACLVGSCSRATLAQVADAERSMPVLRLDPSAIVAGDGEAQRAA 301 Query: 306 TWAKDQLGSGPILIASSSTPDEVAALQSRHGRDAAGHAIEQAMADIAEGLVQSGVHRLVV 365 WA ++ GP+LIASS TPD+VAA+Q++ GR AAGHAIEQ MADIA LV+SGV RLV+ Sbjct: 302 EWAIARIADGPVLIASSGTPDQVAAVQAKFGRVAAGHAIEQVMADIAVRLVESGVRRLVI 361 Query: 366 AGGETSGAVVDRLGIPGFLVGAEIAAGVPVLRAVGAKNGEMVLALKSGNFGGPEFFSDAL 425 AGGETSGAVVDRL IPGFLVG EIAAGVPVLRAVGA M+LALKSGNFGGP FF+DAL Sbjct: 362 AGGETSGAVVDRLAIPGFLVGPEIAAGVPVLRAVGACRSGMLLALKSGNFGGPRFFTDAL 421 Query: 426 ALMT 429 LM+ Sbjct: 422 GLMS 425 >ref|YP_001238932.1| hypothetical protein BBta_2899 [Bradyrhizobium sp. BTAi1] gb|ABQ35026.1| hypothetical protein BBta_2899 [Bradyrhizobium sp. BTAi1] Length = 396 Score = 582 bits (1499), Expect = e-164, Method: Compositional matrix adjust. Identities = 292/395 (73%), Positives = 335/395 (84%) Query: 34 VQTIGVPADDLALPEVDAVVVSLKSRSIEAGLAVTRSRAAEAWLRGRGAKHILFKICSTF 93 +QTIGVPA DLALPEVDAVVVSLKSRSIEA AV RSR A+ WLR RGA+H+LFKICSTF Sbjct: 1 MQTIGVPASDLALPEVDAVVVSLKSRSIEASQAVARSREADRWLRARGAEHVLFKICSTF 60 Query: 94 DSTDAGNIGPVMDALRADSSDAIVLVTPAFPETGRTVYQGNLFVGSVPLNESPLKDHPLN 153 DSTDAGNIGPVMDAL D+ D IVLVTPAFPET RTVYQGNLFVG+VPLNESPLKDHPLN Sbjct: 61 DSTDAGNIGPVMDALAGDAGDPIVLVTPAFPETKRTVYQGNLFVGAVPLNESPLKDHPLN 120 Query: 154 PMHDSNLVRVLARQSTTKVGLVDLATLSRGADAVRAKLAELAQSGIGAAIVDAVFDRDLE 213 PMHD+NLVRVL RQS ++GLVDLAT+ G +A+ +L ELA GAAI+DAVFD DL Sbjct: 121 PMHDANLVRVLGRQSRRRIGLVDLATVVHGPEAIGHRLQELAGQDFGAAIIDAVFDADLT 180 Query: 214 TIGQVALDHRLSVGASGIGLGLARALVATSKAKPDTADAMLATPVGGPAACLAGSCSQAT 273 IG AL ++SVGASGIGLGLARALVA +A PVGG AACLAGSCSQAT Sbjct: 181 AIGAAALKSKVSVGASGIGLGLARALVAAGQAHSHGLTHHDDAPVGGMAACLAGSCSQAT 240 Query: 274 LRQIANAEKVMPVLHLDPEQVIAGRDEARRALTWAKDQLGSGPILIASSSTPDEVAALQS 333 L+QIA AE +MPVLHLD ++AG DEA+RA+ WA +++G GP+LIASS+TPD+V+ALQ+ Sbjct: 241 LQQIAQAETIMPVLHLDAAALVAGPDEAQRAMVWAGERIGRGPVLIASSATPDQVSALQA 300 Query: 334 RHGRDAAGHAIEQAMADIAEGLVQSGVHRLVVAGGETSGAVVDRLGIPGFLVGAEIAAGV 393 RHGR+AAGHAIEQAMAD+AEGL+++GV RL+VAGGETSGAVVDRL IPGFLVG EIAAGV Sbjct: 301 RHGREAAGHAIEQAMADLAEGLIEAGVRRLIVAGGETSGAVVDRLRIPGFLVGPEIAAGV 360 Query: 394 PVLRAVGAKNGEMVLALKSGNFGGPEFFSDALALM 428 PVLRA+GA+ G+M+LALKSGNFGGP+FF+DAL LM Sbjct: 361 PVLRAIGAEAGDMLLALKSGNFGGPQFFADALGLM 395