BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0242.0041.p (250 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770980.1| ATP-binding protein [Bradyrhizobium japonicum U... 464 e-129 ref|YP_318276.1| FeS assembly ATPase SufC [Nitrobacter winograds... 455 e-126 ref|ZP_01047287.1| FeS assembly ATPase SufC [Nitrobacter sp. Nb-... 454 e-126 ref|YP_001239943.1| hypothetical protein BBta_3967 [Bradyrhizobi... 451 e-125 ref|YP_001205548.1| SufC, related to ABC transporter associated ... 449 e-124 >ref|NP_770980.1| ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC49605.1| blr4340 [Bradyrhizobium japonicum USDA 110] Length = 259 Score = 464 bits (1195), Expect = e-129, Method: Compositional matrix adjust. Identities = 225/249 (90%), Positives = 238/249 (95%) Query: 1 MSLLEVKDLQVRVEEREILHGLSLTVNPGEVHAIMGPSGSGKSTLSHVIAGKPGYEVTGG 60 M+LLEVKDLQVRVEEREILHGL+LTVN GEVHAIMGP+GSGKSTLSHVIAGKPGYEVTGG Sbjct: 11 MALLEVKDLQVRVEEREILHGLTLTVNEGEVHAIMGPNGSGKSTLSHVIAGKPGYEVTGG 70 Query: 61 QILFRGEDLLEMEPNERAAKGVFLAFQYPVEIPGVTTWNFLHAALNAQRKARGEDEISSP 120 QILF+GEDLLEM P+ERAAKGVFLAFQYPVEIPGV T FL ALNAQRKARGE E S+P Sbjct: 71 QILFKGEDLLEMAPDERAAKGVFLAFQYPVEIPGVATMTFLRTALNAQRKARGESEYSTP 130 Query: 121 AFLKKVREVAKSLNIPQDMLKRGVNVGFSGGEKKRNEILQMALFEPAVCILDEMDSGLDI 180 FLKKVREV+KSLNIPQDMLKRGVNVGFSGGEKKRNE+LQMALFEP++CILDEMDSGLDI Sbjct: 131 DFLKKVREVSKSLNIPQDMLKRGVNVGFSGGEKKRNEVLQMALFEPSLCILDEMDSGLDI 190 Query: 181 DALRIAADGVNALRSPERAMVVITHYQRLLNYIVPDFVHVMSKGRVVKSGGKELALELEE 240 DALRIAADGVNALR+P+RAMVVITHYQRLLNYIVPDFVHVMSKGRVVKSGGKELALELE+ Sbjct: 191 DALRIAADGVNALRAPKRAMVVITHYQRLLNYIVPDFVHVMSKGRVVKSGGKELALELED 250 Query: 241 SGYTQFEDA 249 SGY QFEDA Sbjct: 251 SGYAQFEDA 259 >ref|YP_318276.1| FeS assembly ATPase SufC [Nitrobacter winogradskyi Nb-255] gb|ABA04924.1| FeS assembly ATPase SufC [Nitrobacter winogradskyi Nb-255] Length = 249 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 220/249 (88%), Positives = 234/249 (93%) Query: 1 MSLLEVKDLQVRVEEREILHGLSLTVNPGEVHAIMGPSGSGKSTLSHVIAGKPGYEVTGG 60 M LLEVKDLQVRVEEREILHGLSLTVN GEVHAIMGP+GSGKSTLSHVIAGKPGYEVTGG Sbjct: 1 MPLLEVKDLQVRVEEREILHGLSLTVNKGEVHAIMGPNGSGKSTLSHVIAGKPGYEVTGG 60 Query: 61 QILFRGEDLLEMEPNERAAKGVFLAFQYPVEIPGVTTWNFLHAALNAQRKARGEDEISSP 120 QILF+GEDLLEMEP+ERAAKGVFLAFQYPVEIPGV T FL ALNAQRKARGE E S+P Sbjct: 61 QILFKGEDLLEMEPDERAAKGVFLAFQYPVEIPGVATMTFLRTALNAQRKARGESEYSTP 120 Query: 121 AFLKKVREVAKSLNIPQDMLKRGVNVGFSGGEKKRNEILQMALFEPAVCILDEMDSGLDI 180 FLKKVR+VA SLNIPQDML+RG+NVGFSGGEKKRNE+LQMALFEP++CILDEMDSGLDI Sbjct: 121 NFLKKVRDVAASLNIPQDMLRRGINVGFSGGEKKRNEVLQMALFEPSLCILDEMDSGLDI 180 Query: 181 DALRIAADGVNALRSPERAMVVITHYQRLLNYIVPDFVHVMSKGRVVKSGGKELALELEE 240 DALR+AADGVNALRSP+RAMVVITHYQRLLNYIVPD VHVMSKGRVVKSG K+LALELE Sbjct: 181 DALRVAADGVNALRSPDRAMVVITHYQRLLNYIVPDVVHVMSKGRVVKSGNKDLALELEA 240 Query: 241 SGYTQFEDA 249 SGY QFE+A Sbjct: 241 SGYAQFEEA 249 >ref|ZP_01047287.1| FeS assembly ATPase SufC [Nitrobacter sp. Nb-311A] gb|EAQ34715.1| FeS assembly ATPase SufC [Nitrobacter sp. Nb-311A] Length = 247 Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust. Identities = 219/247 (88%), Positives = 233/247 (94%) Query: 3 LLEVKDLQVRVEEREILHGLSLTVNPGEVHAIMGPSGSGKSTLSHVIAGKPGYEVTGGQI 62 +LEVKDLQVRVEEREILHGLSLTVN GEVHAIMGP+GSGKSTLSHVIAGKPGYEVTGGQI Sbjct: 1 MLEVKDLQVRVEEREILHGLSLTVNKGEVHAIMGPNGSGKSTLSHVIAGKPGYEVTGGQI 60 Query: 63 LFRGEDLLEMEPNERAAKGVFLAFQYPVEIPGVTTWNFLHAALNAQRKARGEDEISSPAF 122 LF GEDLLEMEP+ERAAKGVFLAFQYPVEIPGV T FL ALNAQRKARGE E S+P F Sbjct: 61 LFNGEDLLEMEPDERAAKGVFLAFQYPVEIPGVATMTFLRTALNAQRKARGESEYSTPNF 120 Query: 123 LKKVREVAKSLNIPQDMLKRGVNVGFSGGEKKRNEILQMALFEPAVCILDEMDSGLDIDA 182 LKKVR+VA SLNIPQDML+RG+NVGFSGGEKKRNE+LQMALFEP++CILDEMDSGLDIDA Sbjct: 121 LKKVRDVAASLNIPQDMLRRGINVGFSGGEKKRNEVLQMALFEPSLCILDEMDSGLDIDA 180 Query: 183 LRIAADGVNALRSPERAMVVITHYQRLLNYIVPDFVHVMSKGRVVKSGGKELALELEESG 242 LR+AADGVNALRSP+RAMVVITHYQRLLNYIVPDFVHVMSKGRVVKSG K+LALELE SG Sbjct: 181 LRVAADGVNALRSPDRAMVVITHYQRLLNYIVPDFVHVMSKGRVVKSGNKDLALELEASG 240 Query: 243 YTQFEDA 249 Y QFE+A Sbjct: 241 YAQFEEA 247 >ref|YP_001239943.1| hypothetical protein BBta_3967 [Bradyrhizobium sp. BTAi1] gb|ABQ36037.1| SufC [Bradyrhizobium sp. BTAi1] Length = 250 Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust. Identities = 215/250 (86%), Positives = 236/250 (94%) Query: 1 MSLLEVKDLQVRVEEREILHGLSLTVNPGEVHAIMGPSGSGKSTLSHVIAGKPGYEVTGG 60 M+LLE+K+LQVRVEEREILHGL+LT++ G+VHAIMGP+GSGKSTLSHVIAGKPGYEVTGG Sbjct: 1 MALLEIKNLQVRVEEREILHGLTLTIDAGKVHAIMGPNGSGKSTLSHVIAGKPGYEVTGG 60 Query: 61 QILFRGEDLLEMEPNERAAKGVFLAFQYPVEIPGVTTWNFLHAALNAQRKARGEDEISSP 120 +ILF+GEDLL M P+ERAAKGVFLAFQYPVEIPGV T FL ALNAQRKARGE+E S+P Sbjct: 61 EILFKGEDLLAMAPDERAAKGVFLAFQYPVEIPGVATMTFLRTALNAQRKARGEEEYSTP 120 Query: 121 AFLKKVREVAKSLNIPQDMLKRGVNVGFSGGEKKRNEILQMALFEPAVCILDEMDSGLDI 180 FLKKVRE++K LNIPQDMLKRGVNVGFSGGEKKRNE+LQMALF+P++CILDEMDSGLDI Sbjct: 121 DFLKKVREISKQLNIPQDMLKRGVNVGFSGGEKKRNEVLQMALFQPSLCILDEMDSGLDI 180 Query: 181 DALRIAADGVNALRSPERAMVVITHYQRLLNYIVPDFVHVMSKGRVVKSGGKELALELEE 240 DALRIAADGVNALRSPER+M+VITHYQRLLNYIVPD VHVMSKGRVVKSGGKELALELE Sbjct: 181 DALRIAADGVNALRSPERSMIVITHYQRLLNYIVPDVVHVMSKGRVVKSGGKELALELEA 240 Query: 241 SGYTQFEDAA 250 SGY QFEDAA Sbjct: 241 SGYAQFEDAA 250 >ref|YP_001205548.1| SufC, related to ABC transporter associated with Fe-S cluster assembly ATP-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL77322.1| SufC, related to ABC transporter associated with Fe-S cluster assembly (ATP-binding protein) [Bradyrhizobium sp. ORS 278] Length = 250 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 213/250 (85%), Positives = 237/250 (94%) Query: 1 MSLLEVKDLQVRVEEREILHGLSLTVNPGEVHAIMGPSGSGKSTLSHVIAGKPGYEVTGG 60 M+LLE+K+LQVRVEEREILHGL+LT++ G+VHAIMGP+GSGKSTLSHVIAGKPGYEVTGG Sbjct: 1 MALLEIKNLQVRVEEREILHGLTLTIDEGKVHAIMGPNGSGKSTLSHVIAGKPGYEVTGG 60 Query: 61 QILFRGEDLLEMEPNERAAKGVFLAFQYPVEIPGVTTWNFLHAALNAQRKARGEDEISSP 120 +ILF+GEDLL M+P+ERAAKGVFLAFQYPVEIPGV T FL ALNAQRKARGE+E S+P Sbjct: 61 EILFKGEDLLAMDPDERAAKGVFLAFQYPVEIPGVATMTFLRTALNAQRKARGEEEYSTP 120 Query: 121 AFLKKVREVAKSLNIPQDMLKRGVNVGFSGGEKKRNEILQMALFEPAVCILDEMDSGLDI 180 FLKKVRE++K L+IPQDMLKRGVNVGFSGGEKKRNE+LQMALF+P++CILDEMDSGLDI Sbjct: 121 DFLKKVREISKQLSIPQDMLKRGVNVGFSGGEKKRNEVLQMALFQPSLCILDEMDSGLDI 180 Query: 181 DALRIAADGVNALRSPERAMVVITHYQRLLNYIVPDFVHVMSKGRVVKSGGKELALELEE 240 DALRIAADGVNALR+PER+M+VITHYQRLLNYIVPD VHVMSKGRVVKSGGKELALELE Sbjct: 181 DALRIAADGVNALRAPERSMIVITHYQRLLNYIVPDVVHVMSKGRVVKSGGKELALELEA 240 Query: 241 SGYTQFEDAA 250 SGY QFEDAA Sbjct: 241 SGYAQFEDAA 250