BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0242.0038.p         (123 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_569591.1| hypothetical protein RPD_2460 [Rhodopseudomonas...   206   1e-51
ref|YP_532703.1| hypothetical protein RPC_2836 [Rhodopseudomonas...   202   1e-50
ref|YP_486602.1| hypothetical protein RPB_2989 [Rhodopseudomonas...   201   4e-50
ref|ZP_01047284.1| hypothetical protein NB311A_19025 [Nitrobacte...   200   6e-50
ref|YP_001205551.1| hypothetical protein BRADO3545 [Bradyrhizobi...   199   2e-49

>ref|YP_569591.1| hypothetical protein RPD_2460 [Rhodopseudomonas palustris BisB5]
 gb|ABE39690.1| protein of unknown function DUF59 [Rhodopseudomonas palustris
           BisB5]
          Length = 122

 Score =  206 bits (524), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 101/123 (82%), Positives = 113/123 (91%), Gaps = 1/123 (0%)

Query: 1   MTDTAEVKTATMETTSALPAEETERMSGEIVAALKTVFDPEIPADIYELGLIYKVDLKDD 60
           MTDT E K A M+T SALP EETER+  EIV+ALKTVFDPEIPADIYELGLIYKV++KDD
Sbjct: 1   MTDTIEAK-ANMQTVSALPPEETERLGTEIVSALKTVFDPEIPADIYELGLIYKVEIKDD 59

Query: 61  RSVDIMMTLTTPNCPAAGELPQMVENAVASVPGVGVVNVNLVWDPAWTPDRMSDEARLVL 120
           R+VD+ MTLTTPNCPAAGELP MVENAVA+VPGVGVVNV++VW+PAWTP+RMSDEARLVL
Sbjct: 60  RTVDVEMTLTTPNCPAAGELPTMVENAVATVPGVGVVNVSIVWEPAWTPERMSDEARLVL 119

Query: 121 NMW 123
           NMW
Sbjct: 120 NMW 122


>ref|YP_532703.1| hypothetical protein RPC_2836 [Rhodopseudomonas palustris BisB18]
 gb|ABD88384.1| protein of unknown function DUF59 [Rhodopseudomonas palustris
           BisB18]
          Length = 123

 Score =  202 bits (515), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 97/123 (78%), Positives = 111/123 (90%)

Query: 1   MTDTAEVKTATMETTSALPAEETERMSGEIVAALKTVFDPEIPADIYELGLIYKVDLKDD 60
           MTDT E +T+ M+T+SALP EETER+  +IVAALKTVFDPEIPADIYELGLIYKVD+KDD
Sbjct: 1   MTDTVEARTSNMQTSSALPPEETERLGSDIVAALKTVFDPEIPADIYELGLIYKVDIKDD 60

Query: 61  RSVDIMMTLTTPNCPAAGELPQMVENAVASVPGVGVVNVNLVWDPAWTPDRMSDEARLVL 120
           R+V++ MTLTTPNCPAA ELP  VENAVASVPGVGVV VN+VW+P WTP+RM+DEARLVL
Sbjct: 61  RTVEVDMTLTTPNCPAAAELPITVENAVASVPGVGVVTVNIVWEPPWTPERMTDEARLVL 120

Query: 121 NMW 123
           NMW
Sbjct: 121 NMW 123


>ref|YP_486602.1| hypothetical protein RPB_2989 [Rhodopseudomonas palustris HaA2]
 gb|ABD07691.1| Protein of unknown function DUF59 [Rhodopseudomonas palustris HaA2]
          Length = 122

 Score =  201 bits (510), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 100/123 (81%), Positives = 110/123 (89%), Gaps = 1/123 (0%)

Query: 1   MTDTAEVKTATMETTSALPAEETERMSGEIVAALKTVFDPEIPADIYELGLIYKVDLKDD 60
           MTDT E K A M+T SALP EETER+  EIVAALKTVFDPEIPADIYELGLIYKV++KDD
Sbjct: 1   MTDTIEAK-ANMQTVSALPPEETERLGTEIVAALKTVFDPEIPADIYELGLIYKVEIKDD 59

Query: 61  RSVDIMMTLTTPNCPAAGELPQMVENAVASVPGVGVVNVNLVWDPAWTPDRMSDEARLVL 120
           R+VD+ MTLTTPNCPAA ELP MVENAVA+VPGVGVVNV +VW+P WTP+RMSDEARLVL
Sbjct: 60  RTVDVDMTLTTPNCPAAAELPTMVENAVATVPGVGVVNVAIVWEPPWTPERMSDEARLVL 119

Query: 121 NMW 123
           NMW
Sbjct: 120 NMW 122


>ref|ZP_01047284.1| hypothetical protein NB311A_19025 [Nitrobacter sp. Nb-311A]
 gb|EAQ34712.1| hypothetical protein NB311A_19025 [Nitrobacter sp. Nb-311A]
          Length = 126

 Score =  200 bits (509), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 99/126 (78%), Positives = 111/126 (88%), Gaps = 3/126 (2%)

Query: 1   MTDTAEV---KTATMETTSALPAEETERMSGEIVAALKTVFDPEIPADIYELGLIYKVDL 57
           M+DTAE+   KT  M+T+SAL AEETERM   IVAALKTVFDPEIPADIYELGLIYKVD+
Sbjct: 1   MSDTAELVVNKTCHMQTSSALSAEETERMGTGIVAALKTVFDPEIPADIYELGLIYKVDI 60

Query: 58  KDDRSVDIMMTLTTPNCPAAGELPQMVENAVASVPGVGVVNVNLVWDPAWTPDRMSDEAR 117
           KDDR+VDI MTLT+PNCP+A ELP MVENAVASVPGVGVVNV++VW+P W PDRM+DEAR
Sbjct: 61  KDDRAVDIEMTLTSPNCPSAAELPTMVENAVASVPGVGVVNVSIVWEPQWMPDRMTDEAR 120

Query: 118 LVLNMW 123
            VLNMW
Sbjct: 121 AVLNMW 126


>ref|YP_001205551.1| hypothetical protein BRADO3545 [Bradyrhizobium sp. ORS 278]
 emb|CAL77325.1| conserved hypothetical protein (domain of unknown function DUF59)
           [Bradyrhizobium sp. ORS 278]
          Length = 123

 Score =  199 bits (505), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/123 (85%), Positives = 117/123 (95%)

Query: 1   MTDTAEVKTATMETTSALPAEETERMSGEIVAALKTVFDPEIPADIYELGLIYKVDLKDD 60
           MTDTA+VKT ++ET SALP EETER+S EI+AALKTVFDPEIPADIYELGLIYKVD+KDD
Sbjct: 1   MTDTADVKTQSVETHSALPPEETERLSTEIIAALKTVFDPEIPADIYELGLIYKVDIKDD 60

Query: 61  RSVDIMMTLTTPNCPAAGELPQMVENAVASVPGVGVVNVNLVWDPAWTPDRMSDEARLVL 120
           RSVD++MTLTTPNCPAAGELP MVENA+ASVPGVGVV+VN+VW+P WTPDRMSDEARLVL
Sbjct: 61  RSVDVVMTLTTPNCPAAGELPTMVENAIASVPGVGVVSVNIVWEPQWTPDRMSDEARLVL 120

Query: 121 NMW 123
           NMW
Sbjct: 121 NMW 123