BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0242.0024.p (298 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_884985.1| putative agmatinase [Bordetella parapertussis 1... 327 1e-87 ref|YP_003981073.1| arginase family protein 1 [Achromobacter xyl... 282 5e-74 ref|YP_785423.1| agmatinase/arginase [Bordetella avium 197N] >gi... 280 2e-73 gb|EGP47834.1| arginase family protein 1 [Achromobacter xylosoxi... 280 2e-73 ref|NP_880266.1| putative arginase [Bordetella pertussis Tohama ... 278 6e-73 >ref|NP_884985.1| putative agmatinase [Bordetella parapertussis 12822] ref|NP_889244.1| agmatinase [Bordetella bronchiseptica RB50] emb|CAE38071.1| Putative agmatinase [Bordetella parapertussis] emb|CAE33200.1| Putative agmatinase [Bordetella bronchiseptica RB50] Length = 327 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 159/295 (53%), Positives = 204/295 (69%) Query: 1 MGLPAGLPRPGSRAAVLGVPFDCGTHPFRVGARQGPLEVRRESRLIRRYHPSLADVDVLS 60 MG+P G+RAA+LG+PFDCGTH FR+GARQGP +R +SRL+R ++P LAD + L Sbjct: 18 MGVPHRHAIDGARAAILGIPFDCGTHAFRIGARQGPQSIREQSRLMRTFNPELADYNPLQ 77 Query: 61 LLGAVDAGDVALVPGRIEDAFVKIEAAAGRILELGAVPVGIGGDGSVSLPLMRAAARYHK 120 LG +D G+V +VP I DAF +IE A G I++ GAVPV +GGDGSVSLP +RA + H Sbjct: 78 RLGVIDCGNVRVVPSDILDAFERIEQAVGAIVDGGAVPVTMGGDGSVSLPQLRAVGKRHP 137 Query: 121 DLVALHIDSHTDAYPYTPDDRYNAATQFTNAAQEGVVNAGRSWHIGVRGFTYCPGVLEHT 180 L +H+DSHTD + YNA TQFT+AA EG V+ ++HIG RG T+ V H Sbjct: 138 GLAVIHLDSHTDTNTFVKGKEYNAGTQFTHAALEGRVDTSLAFHIGTRGTTFTQHVFRHA 197 Query: 181 RSLGFRVVTIEELMRRGFAQTVAEFSQVVGARPVYLCWDMDVFDPSVAPGVCTPAWGGLS 240 R G++++ + EL+ RG A+ + + +G RPVYLC DMDV DPS APGVC P+WGGLS Sbjct: 198 RHFGYQIIPLNELLARGMAEVLQDLRARLGERPVYLCLDMDVLDPSCAPGVCAPSWGGLS 257 Query: 241 AREGIELLRSLSGLNIVAMDFNTVSPPQDVQGMAAQLCAHMIMEALVLLAAGMGL 295 ARE I LR L+GLNIVA+D NTVSPP DV G A L A +++E LVLL +GL Sbjct: 258 AREAIAFLRGLAGLNIVAIDVNTVSPPHDVNGTTASLAAALMVEGLVLLCKRLGL 312 >ref|YP_003981073.1| arginase family protein 1 [Achromobacter xylosoxidans A8] gb|ADP18358.1| arginase family protein 1 [Achromobacter xylosoxidans A8] Length = 317 Score = 282 bits (721), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 190/292 (65%), Gaps = 20/292 (6%) Query: 15 AVLGVPFDCGTHPFRVGARQGPLEVRRESRLIRRYHPSLADVDVL---------SLLGAV 65 V+G+PFDCGTHPFRVG+RQGP +R +SRL+R +D+ L A+ Sbjct: 32 CVVGIPFDCGTHPFRVGSRQGPDAIREQSRLLR-------PIDIFRRHGIDNPPEFLRAI 84 Query: 66 DAGDVALVPGRIEDAFVKIEAAAGRILELGAVPVGIGGDGSVSLPLMRAAARYHKDLVAL 125 D G+VA PG + ++ IEA G IL+ GA+P+ +GGDG+V+LP +RA AR H D V L Sbjct: 85 DVGNVACHPGDPDASYPLIEAGIGAILDSGAIPISMGGDGAVTLPQLRAVARRHPDFVVL 144 Query: 126 HIDSHTDAYPYTPDDRYNAATQFTNAAQEGVVNAGRSWHIGVRGFTYCPGVLEHTRSLGF 185 H DSHTD YP YN AT FT AA+EG+++ S+H+G RG ++ PGVLE R +G+ Sbjct: 145 HFDSHTDTYPIP---GYNTATTFTRAAEEGLLDVASSFHVGTRGSSFMPGVLEFGREVGY 201 Query: 186 RVVTIEELMRRGFAQTVAEFSQVVGARPVYLCWDMDVFDPSVAPGVCTPAWGGLSAREGI 245 ++ ++ + + + Q +G RPVYLC+DMD+FDPS APGVCTP WGGL+A+EG+ Sbjct: 202 TILPYDDFDQDQ-KGALEQIKQRIGQRPVYLCFDMDIFDPSCAPGVCTPEWGGLTAKEGL 260 Query: 246 ELLRSLSGLNIVAMDFNTVSPPQDVQGMAAQLCAHMIMEALVLLAAGMGLLP 297 LLR L+GLN VA D NTVSPPQDVQG A L A ++ E L A + P Sbjct: 261 ALLRQLAGLNFVAFDVNTVSPPQDVQGATAFLAATVMQEFCALAAVAVQQYP 312 >ref|YP_785423.1| agmatinase/arginase [Bordetella avium 197N] emb|CAJ48506.1| putative agmatinase/arginase [Bordetella avium 197N] Length = 296 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 146/280 (52%), Positives = 189/280 (67%), Gaps = 6/280 (2%) Query: 16 VLGVPFDCGTHPFRVGARQGPLEVRRESRLIRRY--HPSLADVDVLSLLGAVDAGDVALV 73 VLG+PFDCGTHPFRVG+RQGP +R +SRL+R + + L AVDAG+V Sbjct: 17 VLGIPFDCGTHPFRVGSRQGPDAIREQSRLLRPFDLFRRAGVENPAQFLRAVDAGNVVCW 76 Query: 74 PGRIEDAFVKIEAAAGRILELGAVPVGIGGDGSVSLPLMRAAARYHKDLVALHIDSHTDA 133 PG E ++ IE A RILE GA+PV +GGDG+V+LP +RA R H LV LH D+HTD Sbjct: 77 PGDPERSYPVIETAVDRILEAGAIPVTMGGDGAVTLPQLRAVGRRHPGLVVLHFDAHTDT 136 Query: 134 YPYTPDDRYNAATQFTNAAQEGVVNAGRSWHIGVRGFTYCPGVLEHTRSLGFRVVTIEEL 193 YP + YN A+ FT AA+E +++ S+H+G RG ++ GV+E++R +G+ V+ ++ Sbjct: 137 YPVS---GYNTASTFTRAAEETLLDVSASFHVGTRGNSFMGGVVEYSREVGYTVIPFDDF 193 Query: 194 MRRGFAQTVAEFSQVVGARPVYLCWDMDVFDPSVAPGVCTPAWGGLSAREGIELLRSLSG 253 R A + E + VG RPVYLC+DMDVFDPS APGVCTP WGGL+A+EG+ LLR LSG Sbjct: 194 DRDQVAM-LDEIKRRVGDRPVYLCFDMDVFDPSCAPGVCTPEWGGLTAKEGLALLRRLSG 252 Query: 254 LNIVAMDFNTVSPPQDVQGMAAQLCAHMIMEALVLLAAGM 293 LN VA D NTVSPPQDV G A L A ++ E L L A + Sbjct: 253 LNFVAFDVNTVSPPQDVGGATAFLAATVMQEFLALAVAAI 292 >gb|EGP47834.1| arginase family protein 1 [Achromobacter xylosoxidans AXX-A] Length = 317 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 146/293 (49%), Positives = 190/293 (64%), Gaps = 24/293 (8%) Query: 16 VLGVPFDCGTHPFRVGARQGPLEVRRESRLIRRYHPSLADVDVL---------SLLGAVD 66 V+G+PFDCGTHPFRVG+RQGP +R +SRL+R VD+ L +D Sbjct: 33 VVGIPFDCGTHPFRVGSRQGPDAIREQSRLLR-------PVDIFRRHGIDNPPEFLRVID 85 Query: 67 AGDVALVPGRIEDAFVKIEAAAGRILELGAVPVGIGGDGSVSLPLMRAAARYHKDLVALH 126 G+VA PG + ++ IEA G IL+ GA+P+ +GGDG+V+LP +RA A+ H D V LH Sbjct: 86 VGNVACHPGDPDASYPLIEAGIGAILDAGAIPISMGGDGAVTLPQLRAVAQRHPDFVVLH 145 Query: 127 IDSHTDAYPYTPDDRYNAATQFTNAAQEGVVNAGRSWHIGVRGFTYCPGVLEHTRSLGFR 186 DSHTD YP YN AT FT AA+EG+++ RS+H+G RG ++ PGVLE R +G+ Sbjct: 146 FDSHTDTYPIP---GYNTATTFTRAAEEGLLDVRRSFHVGTRGSSFMPGVLEFGREVGYT 202 Query: 187 VVTIEELM--RRGFAQTVAEFSQVVGARPVYLCWDMDVFDPSVAPGVCTPAWGGLSAREG 244 ++ +E +RG + Q +G RPVYLC+DMD+FDPS APGVCTP WGGLS +EG Sbjct: 203 IMPFDEFDADQRGALDAI---KQQIGERPVYLCFDMDIFDPSCAPGVCTPEWGGLSPKEG 259 Query: 245 IELLRSLSGLNIVAMDFNTVSPPQDVQGMAAQLCAHMIMEALVLLAAGMGLLP 297 + LLR L+GLN VA D NTVSPPQDVQG A L A ++ E L A + P Sbjct: 260 LALLRQLAGLNFVAFDVNTVSPPQDVQGATAFLAATVMQEFCALAAVAVRQYP 312 >ref|NP_880266.1| putative arginase [Bordetella pertussis Tohama I] ref|NP_883519.1| putative arginase [Bordetella parapertussis 12822] ref|NP_887966.1| arginase [Bordetella bronchiseptica RB50] emb|CAE36505.1| putative arginase [Bordetella parapertussis] emb|CAE31918.1| putative arginase [Bordetella bronchiseptica RB50] emb|CAE41820.1| putative arginase [Bordetella pertussis Tohama I] gb|AEE66886.1| putative arginase [Bordetella pertussis CS] Length = 301 Score = 278 bits (712), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 150/289 (51%), Positives = 195/289 (67%), Gaps = 11/289 (3%) Query: 1 MGLPAGLPRPGSRAA---VLGVPFDCGTHPFRVGARQGPLEVRRESRLIRRYH-PSLADV 56 MG+PA RP AA VLG+PFDCGTHPFRVGARQGP +R +SRL+R Y A V Sbjct: 1 MGVPAR--RPAGEAALACVLGIPFDCGTHPFRVGARQGPDAIREQSRLLRPYDLARRAGV 58 Query: 57 DV-LSLLGAVDAGDVALVPGRIEDAFVKIEAAAGRILELGAVPVGIGGDGSVSLPLMRAA 115 D + L +D G+VA VPG + ++ IE A ++L+ GA+P+ +GGDG+V+LP +RA Sbjct: 59 DNPVEFLRLLDLGNVACVPGDPQASYPAIEQAVAQVLQAGAIPITMGGDGAVTLPQLRAV 118 Query: 116 ARYHKDLVALHIDSHTDAYPYTPDDRYNAATQFTNAAQEGVVNAGRSWHIGVRGFTYCPG 175 AR + LH DSHTD YP YN AT FT AA+EG+++ S+H+G RG ++ G Sbjct: 119 ARRWPGVAVLHFDSHTDTYPIA---GYNTATTFTRAAEEGLIDLSHSFHVGTRGNSFMGG 175 Query: 176 VLEHTRSLGFRVVTIEELMRRGFAQTVAEFSQVVGARPVYLCWDMDVFDPSVAPGVCTPA 235 V+E+ R +G+ V+ ++ R A T+A +G RPVYLC+DMD+FDPS APGVCTP Sbjct: 176 VIEYGREVGYTVIPYDDF-DRDQAGTLARLRGQLGDRPVYLCFDMDIFDPSCAPGVCTPE 234 Query: 236 WGGLSAREGIELLRSLSGLNIVAMDFNTVSPPQDVQGMAAQLCAHMIME 284 WGGLS +EG+ LLR+LSGLN VA D NTVSPPQDV G A L A ++ E Sbjct: 235 WGGLSPKEGLNLLRALSGLNFVAFDVNTVSPPQDVGGATAFLAASVMQE 283