BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0242.0016.p (424 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08388683.1| major Facilitator Superfamily protein [Sphing... 508 e-142 ref|ZP_06688457.1| major facilitator family transporter [Achromo... 491 e-137 ref|ZP_01305022.1| MFS permease [Sphingomonas sp. SKA58] >gi|944... 471 e-130 ref|YP_003452469.1| arabinose polymer transporter [Azospirillum ... 461 e-127 ref|YP_003545610.1| arabinose polymer transporter [Sphingobium j... 455 e-126 >ref|ZP_08388683.1| major Facilitator Superfamily protein [Sphingomonas sp. S17] gb|EGI55016.1| major Facilitator Superfamily protein [Sphingomonas sp. S17] Length = 401 Score = 508 bits (1308), Expect = e-142, Method: Compositional matrix adjust. Identities = 272/383 (71%), Positives = 305/383 (79%) Query: 40 NFHPGIVHLALAMGGFAIGIAEFATMSLLPFFARDLHISEPQAGHAISAYALGVVVGAPV 99 F PG+VH ALA+GGFAIG EFA MSL P AR L I P AGH ISAYALGVVVGAP+ Sbjct: 4 TFSPGVVHAALAVGGFAIGTTEFAAMSLEPDLARGLGIDAPTAGHVISAYALGVVVGAPM 63 Query: 100 IAVLSACMTRRTLLIALMGFFALMNGLSGLAPDYHTMLALRFLAGLPHGAYFGIAMLVAA 159 +AVLSA + RRTLLIALM FAL NGLS +AP+YH ML RFL+GLPHGAYFGIA LVAA Sbjct: 64 LAVLSAKLARRTLLIALMLMFALGNGLSAMAPNYHWMLVFRFLSGLPHGAYFGIAALVAA 123 Query: 160 SLVPMDKRTAAVGRVLLGLTVATTIGVPLANGVGQAIGWRWAFAIVAGLALLTAALVLIF 219 SLVP ++RT AVGRV+LGLTVAT IGVPLA +GQ + WRW F +VAGLALLT LV I Sbjct: 124 SLVPDERRTVAVGRVMLGLTVATVIGVPLAQMLGQWLNWRWVFGVVAGLALLTTTLVAIA 183 Query: 220 ASRDAANSKASPLRELSALGRKHVWLTLAIGAIGFGGLFSVYTYLASTMLAVTHTSPALV 279 A D + AS REL+AL R VWLTLAIGAIGFGG+F+VYTYLA+T+ VT S L+ Sbjct: 184 APHDRPDEGASVRRELAALSRGQVWLTLAIGAIGFGGMFAVYTYLAATLTEVTGVSEHLI 243 Query: 280 PVTLCVFGAGLTAGNIIVPRFADRALMATAGGLLLWSAATLALYPLAAGNFWTLTADVFL 339 P+ L VFG G+T GNI+VPRFADRALM TAGGLLLWSAA LALYPLAAG+ WT+ +VF Sbjct: 244 PLVLAVFGLGMTIGNIVVPRFADRALMPTAGGLLLWSAAMLALYPLAAGSMWTILPNVFA 303 Query: 340 IGLGGALATVLQTRLMDVAGEAQSLAAALNHSAFNVANALGPWLGGMAVAAGYGWTSTGL 399 IGLGGAL TVLQTRLMDVAGE Q LAAALNHSAFN ANA+GPW GG+A+A G GWTSTG Sbjct: 304 IGLGGALGTVLQTRLMDVAGEGQGLAAALNHSAFNTANAIGPWAGGLAIANGLGWTSTGY 363 Query: 400 VGAGLALAGFAVWAIAVVLARRE 422 VG GLAL GFA+W IA+ +AR E Sbjct: 364 VGCGLALGGFAIWLIAMRVARGE 386 >ref|ZP_06688457.1| major facilitator family transporter [Achromobacter piechaudii ATCC 43553] gb|EFF74663.1| major facilitator family transporter [Achromobacter piechaudii ATCC 43553] Length = 413 Score = 491 bits (1265), Expect = e-137, Method: Compositional matrix adjust. Identities = 259/377 (68%), Positives = 302/377 (80%) Query: 42 HPGIVHLALAMGGFAIGIAEFATMSLLPFFARDLHISEPQAGHAISAYALGVVVGAPVIA 101 P +V +ALA+G FAIG EFATMSLLP+F++ L I P AGH ISAYALGVVVGAP++A Sbjct: 18 RPALVLIALAIGSFAIGTTEFATMSLLPYFSQSLGIDAPTAGHVISAYALGVVVGAPILA 77 Query: 102 VLSACMTRRTLLIALMGFFALMNGLSGLAPDYHTMLALRFLAGLPHGAYFGIAMLVAASL 161 VL A M RR LLIALMG FA+ NGLS +APDYH ML RFL+GLPHGAYFGIA LVA+SL Sbjct: 78 VLGAKMPRRRLLIALMGLFAIGNGLSAIAPDYHWMLFFRFLSGLPHGAYFGIASLVASSL 137 Query: 162 VPMDKRTAAVGRVLLGLTVATTIGVPLANGVGQAIGWRWAFAIVAGLALLTAALVLIFAS 221 VP ++RT AVGRV LGLTVAT +GVP+AN +GQ IGWRW+F +V+ LA+LT V I+A Sbjct: 138 VPANRRTVAVGRVFLGLTVATIVGVPMANWLGQVIGWRWSFGLVSLLAVLTMISVAIYAP 197 Query: 222 RDAANSKASPLRELSALGRKHVWLTLAIGAIGFGGLFSVYTYLASTMLAVTHTSPALVPV 281 A+ KASPLRELSALGR VW+TLAIGA+GFGGLFS+YTYLA T+ AVT +P VP Sbjct: 198 DTPADHKASPLRELSALGRGQVWITLAIGAVGFGGLFSIYTYLADTLTAVTQVAPTTVPF 257 Query: 282 TLCVFGAGLTAGNIIVPRFADRALMATAGGLLLWSAATLALYPLAAGNFWTLTADVFLIG 341 L FG GLT GN++VP FADRA+M TAG LLLWSA LAL+PL A N W +T +VFL+G Sbjct: 258 VLSAFGVGLTVGNMVVPVFADRAVMRTAGLLLLWSAIVLALFPLMAHNVWLITLNVFLVG 317 Query: 342 LGGALATVLQTRLMDVAGEAQSLAAALNHSAFNVANALGPWLGGMAVAAGYGWTSTGLVG 401 +GGAL TVLQTRLMDVAG+AQ LAAALNHSAFN ANALGP LGG+A+AAGYGWTSTG VG Sbjct: 318 VGGALGTVLQTRLMDVAGDAQGLAAALNHSAFNTANALGPLLGGLAIAAGYGWTSTGWVG 377 Query: 402 AGLALAGFAVWAIAVVL 418 + LA+A +W AV+L Sbjct: 378 SLLAIASMPLWLWAVLL 394 >ref|ZP_01305022.1| MFS permease [Sphingomonas sp. SKA58] gb|EAT07157.1| MFS permease [Sphingomonas sp. SKA58] Length = 402 Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust. Identities = 252/389 (64%), Positives = 302/389 (77%) Query: 33 SQDNAPGNFHPGIVHLALAMGGFAIGIAEFATMSLLPFFARDLHISEPQAGHAISAYALG 92 + + P HP +V AL++G FAIG EFA MSLLPFFARDL I P AGHAISAYALG Sbjct: 4 AMNAHPHQAHPALVLFALSVGAFAIGTTEFAAMSLLPFFARDLGIDAPTAGHAISAYALG 63 Query: 93 VVVGAPVIAVLSACMTRRTLLIALMGFFALMNGLSGLAPDYHTMLALRFLAGLPHGAYFG 152 VV GAPVIA A + RRTLLI LM FAL NGLS L+P YH ML RFL+G+PHGAYFG Sbjct: 64 VVAGAPVIAAFGARLPRRTLLIGLMAMFALANGLSALSPSYHWMLLFRFLSGVPHGAYFG 123 Query: 153 IAMLVAASLVPMDKRTAAVGRVLLGLTVATTIGVPLANGVGQAIGWRWAFAIVAGLALLT 212 +A LVAASLVP++KR A+ R+ GLTVAT IGVP+AN +GQA+GWRW F++VA LA+ T Sbjct: 124 VAALVAASLVPIEKRAQAIARMFAGLTVATIIGVPVANWMGQALGWRWGFSVVAVLAIAT 183 Query: 213 AALVLIFASRDAANSKASPLRELSALGRKHVWLTLAIGAIGFGGLFSVYTYLASTMLAVT 272 ALV I+A RD + KASP+REL+AL R VWLTL GAIGFGGLF+VYTY+ASTM+ VT Sbjct: 184 VALVAIYAPRDRGDPKASPMRELTALQRPQVWLTLLTGAIGFGGLFAVYTYVASTMIEVT 243 Query: 273 HTSPALVPVTLCVFGAGLTAGNIIVPRFADRALMATAGGLLLWSAATLALYPLAAGNFWT 332 H S A VP+ L +FG G+T GN+ ADRAL T G++LWSAA+LAL+PL AGN WT Sbjct: 244 HVSEAYVPLVLAIFGVGMTLGNLASAWLADRALNRTVIGIMLWSAASLALFPLMAGNLWT 303 Query: 333 LTADVFLIGLGGALATVLQTRLMDVAGEAQSLAAALNHSAFNVANALGPWLGGMAVAAGY 392 L +F+IGLGG L T LQ RLMDVAG+AQ+LAAAL+HSAFNVANALGPWLGG+++AAG+ Sbjct: 304 LGLVIFMIGLGGGLGTPLQARLMDVAGDAQTLAAALHHSAFNVANALGPWLGGLSIAAGH 363 Query: 393 GWTSTGLVGAGLALAGFAVWAIAVVLARR 421 G STG +G+GLAL G AV+ +A++L RR Sbjct: 364 GLVSTGWIGSGLALGGLAVFLVAIMLQRR 392 >ref|YP_003452469.1| arabinose polymer transporter [Azospirillum sp. B510] dbj|BAI75925.1| arabinose polymer transporter [Azospirillum sp. B510] Length = 471 Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust. Identities = 259/376 (68%), Positives = 300/376 (79%) Query: 42 HPGIVHLALAMGGFAIGIAEFATMSLLPFFARDLHISEPQAGHAISAYALGVVVGAPVIA 101 HPG+V LALAMGGFAIG EFATMSLLP+FAR L I EP AGH ISAYALGVVVGAPVIA Sbjct: 72 HPGLVLLALAMGGFAIGTTEFATMSLLPYFARGLGIDEPTAGHVISAYALGVVVGAPVIA 131 Query: 102 VLSACMTRRTLLIALMGFFALMNGLSGLAPDYHTMLALRFLAGLPHGAYFGIAMLVAASL 161 VL+A + RRTLLI LM FAL N S +P Y MLA RF++GLPHGAYFG+A LVAASL Sbjct: 132 VLAARLARRTLLIGLMAVFALANVASAFSPSYGWMLAFRFMSGLPHGAYFGVAALVAASL 191 Query: 162 VPMDKRTAAVGRVLLGLTVATTIGVPLANGVGQAIGWRWAFAIVAGLALLTAALVLIFAS 221 VP +R AV R +LGLTVAT IGVP+AN +GQA+GWRW F +V LALLT LV IFA Sbjct: 192 VPPRRRAQAVARTMLGLTVATIIGVPMANWIGQALGWRWGFGVVGLLALLTVVLVWIFAP 251 Query: 222 RDAANSKASPLRELSALGRKHVWLTLAIGAIGFGGLFSVYTYLASTMLAVTHTSPALVPV 281 +D + ++SPLREL AL R+ VWLTL IGAIGFGG+F+VYTY+AST++ VT SPA+VPV Sbjct: 252 KDRPHPESSPLRELGALKRRQVWLTLGIGAIGFGGMFAVYTYVASTLMEVTRVSPAMVPV 311 Query: 282 TLCVFGAGLTAGNIIVPRFADRALMATAGGLLLWSAATLALYPLAAGNFWTLTADVFLIG 341 L VFGAG+T G ++ ADRALM T +LLWSA +LALYP AAG+ W ++A VF+IG Sbjct: 312 VLAVFGAGMTVGTLVSAWAADRALMPTVAFVLLWSAGSLALYPFAAGDVWLVSAVVFMIG 371 Query: 342 LGGALATVLQTRLMDVAGEAQSLAAALNHSAFNVANALGPWLGGMAVAAGYGWTSTGLVG 401 GG L T LQ RLMDVA +AQ+LAAALNHSAFN ANALGPWLGGMA+AAG+GWTSTG VG Sbjct: 372 CGGGLGTPLQARLMDVAEDAQTLAAALNHSAFNAANALGPWLGGMAIAAGWGWTSTGWVG 431 Query: 402 AGLALAGFAVWAIAVV 417 A LALAG AVWA+A++ Sbjct: 432 AALALAGLAVWAVALL 447 >ref|YP_003545610.1| arabinose polymer transporter [Sphingobium japonicum UT26S] dbj|BAI96998.1| arabinose polymer transporter [Sphingobium japonicum UT26S] Length = 403 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 247/370 (66%), Positives = 290/370 (78%) Query: 31 RVSQDNAPGNFHPGIVHLALAMGGFAIGIAEFATMSLLPFFARDLHISEPQAGHAISAYA 90 + S+ + G HP +V LAL+MG FAIG EFA MSLLPFFA DL ISEP AGHAISAYA Sbjct: 3 QASRPPSSGPVHPALVILALSMGAFAIGTTEFAAMSLLPFFAGDLRISEPMAGHAISAYA 62 Query: 91 LGVVVGAPVIAVLSACMTRRTLLIALMGFFALMNGLSGLAPDYHTMLALRFLAGLPHGAY 150 LGVVVGAPVIAVL A + RRTLLI LM FA+ NG+S L+PDY TML RFL+GLPHGAY Sbjct: 63 LGVVVGAPVIAVLGARLPRRTLLIGLMALFAIGNGMSALSPDYATMLLFRFLSGLPHGAY 122 Query: 151 FGIAMLVAASLVPMDKRTAAVGRVLLGLTVATTIGVPLANGVGQAIGWRWAFAIVAGLAL 210 FG+A LVAASLVP D+R AV RV+ GLTVAT IGVP+AN +GQA+GWRW F IVA LA+ Sbjct: 123 FGVAALVAASLVPGDRRALAVARVMTGLTVATVIGVPVANWMGQALGWRWGFGIVAVLAM 182 Query: 211 LTAALVLIFASRDAANSKASPLRELSALGRKHVWLTLAIGAIGFGGLFSVYTYLASTMLA 270 +T LV ++A RDA + A P+REL AL V LTL GAIGFGGLF+VYTY+ASTM++ Sbjct: 183 ITMTLVALYAPRDAGDPAAVPMRELGALREPQVLLTLLTGAIGFGGLFAVYTYVASTMIS 242 Query: 271 VTHTSPALVPVTLCVFGAGLTAGNIIVPRFADRALMATAGGLLLWSAATLALYPLAAGNF 330 VTH S LVPV L +FG G+T GN+ ADRA TA +LLWSAA+LAL+PL AGN Sbjct: 243 VTHVSERLVPVVLAIFGIGMTIGNLAAAWAADRAQGRTAVIVLLWSAASLALFPLMAGNI 302 Query: 331 WTLTADVFLIGLGGALATVLQTRLMDVAGEAQSLAAALNHSAFNVANALGPWLGGMAVAA 390 W+L+ +FLIG GG L +VLQTRLMDVAG+AQ+LAAA +HSAFNVANALGPWLGG+A++A Sbjct: 303 WSLSLVIFLIGCGGGLGSVLQTRLMDVAGDAQTLAAAAHHSAFNVANALGPWLGGLAISA 362 Query: 391 GYGWTSTGLV 400 GYG TSTG + Sbjct: 363 GYGLTSTGWI 372