BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0242.0010.p         (156 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_948015.1| hypothetical protein RPA2673 [Rhodopseudomonas ...   155   2e-36
ref|YP_001991931.1| Integral membrane protein TerC [Rhodopseudom...   155   2e-36
ref|YP_569761.1| integral membrane protein TerC [Rhodopseudomona...   152   2e-35
ref|NP_771224.1| hypothetical protein bll4584 [Bradyrhizobium ja...   144   4e-33
ref|ZP_08629815.1| integral membrane protein TerC [Bradyrhizobia...   144   5e-33

>ref|NP_948015.1| hypothetical protein RPA2673 [Rhodopseudomonas palustris CGA009]
 emb|CAE28114.1| possibly involved in transport [Rhodopseudomonas palustris CGA009]
          Length = 240

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/86 (88%), Positives = 84/86 (97%)

Query: 1   VIVQIIIIDLVFSLDSIITAIGMAQDIEIMIAAVVIACAIMYISSGPVARFVAEHPTTKM 60
           VIVQI+I+DLVFS+DSIITAIGMAQDIEIM+AAV+IA A+MY+SSGPVARFV+EHPTTKM
Sbjct: 129 VIVQIVIVDLVFSIDSIITAIGMAQDIEIMVAAVLIAMAVMYVSSGPVARFVSEHPTTKM 188

Query: 61  LALAFLVLIGVALVADGFKFHIPRGY 86
           LALAFLVLIGVALVADGF FHIPRGY
Sbjct: 189 LALAFLVLIGVALVADGFAFHIPRGY 214


>ref|YP_001991931.1| Integral membrane protein TerC [Rhodopseudomonas palustris TIE-1]
 gb|ACF01456.1| Integral membrane protein TerC [Rhodopseudomonas palustris TIE-1]
          Length = 240

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/86 (88%), Positives = 84/86 (97%)

Query: 1   VIVQIIIIDLVFSLDSIITAIGMAQDIEIMIAAVVIACAIMYISSGPVARFVAEHPTTKM 60
           VIVQI+I+DLVFS+DSIITAIGMAQDIEIM+AAV+IA A+MY+SSGPVARFV+EHPTTKM
Sbjct: 129 VIVQIVIVDLVFSIDSIITAIGMAQDIEIMVAAVLIAMAVMYVSSGPVARFVSEHPTTKM 188

Query: 61  LALAFLVLIGVALVADGFKFHIPRGY 86
           LALAFLVLIGVALVADGF FHIPRGY
Sbjct: 189 LALAFLVLIGVALVADGFAFHIPRGY 214


>ref|YP_569761.1| integral membrane protein TerC [Rhodopseudomonas palustris BisB5]
 gb|ABE39860.1| Integral membrane protein TerC [Rhodopseudomonas palustris BisB5]
          Length = 240

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/86 (87%), Positives = 83/86 (96%)

Query: 1   VIVQIIIIDLVFSLDSIITAIGMAQDIEIMIAAVVIACAIMYISSGPVARFVAEHPTTKM 60
           VIVQI+I+DLVFS+DSIITAIGMA+DIEIM+AAV+IA  IMY+SSGPVARFV+EHPTTKM
Sbjct: 129 VIVQIVIVDLVFSIDSIITAIGMAKDIEIMVAAVLIAMLIMYVSSGPVARFVSEHPTTKM 188

Query: 61  LALAFLVLIGVALVADGFKFHIPRGY 86
           LALAFLVLIGVALVADGF FHIPRGY
Sbjct: 189 LALAFLVLIGVALVADGFAFHIPRGY 214


>ref|NP_771224.1| hypothetical protein bll4584 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49849.1| bll4584 [Bradyrhizobium japonicum USDA 110]
          Length = 241

 Score =  144 bits (363), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 71/75 (94%), Positives = 74/75 (98%)

Query: 12  FSLDSIITAIGMAQDIEIMIAAVVIACAIMYISSGPVARFVAEHPTTKMLALAFLVLIGV 71
           FSLDSIITAIGMAQDIEIMIAAVVIAC IMY+SSGPV+RFVAEHPTTKMLALAFLVLIGV
Sbjct: 140 FSLDSIITAIGMAQDIEIMIAAVVIACLIMYLSSGPVSRFVAEHPTTKMLALAFLVLIGV 199

Query: 72  ALVADGFKFHIPRGY 86
           ALVADGF+FHIPRGY
Sbjct: 200 ALVADGFQFHIPRGY 214


>ref|ZP_08629815.1| integral membrane protein TerC [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP07458.1| integral membrane protein TerC [Bradyrhizobiaceae bacterium SG-6C]
          Length = 243

 Score =  144 bits (362), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 71/86 (82%), Positives = 79/86 (91%)

Query: 1   VIVQIIIIDLVFSLDSIITAIGMAQDIEIMIAAVVIACAIMYISSGPVARFVAEHPTTKM 60
           VI+QII+IDLVFS+DSIITAIGM Q+IEIMIAAV+IA  +MY+SSGPVA FV EHPTTKM
Sbjct: 129 VIMQIIVIDLVFSIDSIITAIGMVQEIEIMIAAVIIAVGVMYVSSGPVAAFVKEHPTTKM 188

Query: 61  LALAFLVLIGVALVADGFKFHIPRGY 86
           LALAFLVLIGVALVADGF FHIPR +
Sbjct: 189 LALAFLVLIGVALVADGFHFHIPRAF 214