BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0241.0082.p (292 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_420559.1| transcriptional regulator [Magnetospirillum mag... 335 4e-90 ref|ZP_08862686.1| transcriptional regulator [Ruegeria sp. TW15] 322 6e-86 ref|ZP_07478584.1| transcriptional regulator [Brucella sp. BO1] ... 295 6e-78 ref|ZP_01749680.1| Predicted transcriptional regulator [Roseobac... 295 7e-78 ref|NP_767514.1| partitioning protein [Bradyrhizobium japonicum ... 290 2e-76 >ref|YP_420559.1| transcriptional regulator [Magnetospirillum magneticum AMB-1] dbj|BAE50000.1| Predicted transcriptional regulator [Magnetospirillum magneticum AMB-1] Length = 295 Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 168/289 (58%), Positives = 231/289 (79%), Gaps = 3/289 (1%) Query: 2 SSVQSIEIIPIGAIDVVNPRARNRRIFKDIVTSVAELGLKRPITVRRKPGEGELRYDLVC 61 SS Q+IE+IP+ I V+NPR RN+++F+DIV S+AE+GLK+PITV R+ + RYDL+C Sbjct: 4 SSGQAIELIPMDRIRVINPRLRNQKVFRDIVDSIAEVGLKKPITVTRREDQNGPRYDLIC 63 Query: 62 GQGRLEAYEALGQRDIPAIIVDASTEDSAIMSLVENCARRQHRSIDLLHDIEGMRLRGYE 121 GQGRLEA++ LGQ +IPA +V+A +++ + SLVENCARR H++IDLLHDI GM+ RGY Sbjct: 64 GQGRLEAFQVLGQSEIPAFVVEADSQELMVKSLVENCARRLHQAIDLLHDIGGMKRRGYS 123 Query: 122 FDEIGRKTGLTVEYVRGVSSLLEGGEQRLLRAVEAGQMPVSVAVLISQAEDNEVQYVLQQ 181 EI +KTGLT+EYVRGV LLE GE RLLRAVE+GQ+PVSVAV I++A+D VQ LQQ Sbjct: 124 EPEITKKTGLTLEYVRGVVRLLEKGETRLLRAVESGQIPVSVAVDIAEADDLGVQSALQQ 183 Query: 182 AYEEKLLRGQRLLAAKKLIEQRRRRGKGYK-SGPRRVEGAPLSSNALLRAYRQDVDRKKV 240 AYE+ LLRG++LL AK+L+E R RRGKG + +GP R + AP SS+AL+RAYR D ++K++ Sbjct: 184 AYEQNLLRGRKLLIAKRLVENRSRRGKGLRPTGPTR-KDAP-SSDALVRAYRDDTEKKRL 241 Query: 241 LIRKSNGTKARLIFILEALRKLLTEPDFLAILEAEKLDTLPKNLAVRLQ 289 L+R++N + RL+F+ EA R+LL + +F+ +L AE L+++P+NLA R+Q Sbjct: 242 LVRRANAARTRLLFMTEAFRRLLDDENFVTLLRAEGLESVPQNLARRIQ 290 >ref|ZP_08862686.1| transcriptional regulator [Ruegeria sp. TW15] Length = 296 Score = 322 bits (824), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 165/284 (58%), Positives = 220/284 (77%), Gaps = 1/284 (0%) Query: 5 QSIEIIPIGAIDVVNPRARNRRIFKDIVTSVAELGLKRPITVRRKPGEGELRYDLVCGQG 64 Q+ ++IP+ I VVNPR RNR+ F++IV ++AELGLKRPITV + E LR+DLVCGQG Sbjct: 7 QTAKLIPMDRITVVNPRVRNRKAFREIVDNIAELGLKRPITVAARQSEDGLRFDLVCGQG 66 Query: 65 RLEAYEALGQRDIPAIIVDASTEDSAIMSLVENCARRQHRSIDLLHDIEGMRLRGYEFDE 124 RLEA++ LGQ +IPAII+DAS+ED +MSLVEN ARRQHR++DLL DI G++ RGY E Sbjct: 67 RLEAFQELGQTEIPAIIIDASSEDCLVMSLVENLARRQHRALDLLRDIRGLKERGYSGPE 126 Query: 125 IGRKTGLTVEYVRGVSSLLEGGEQRLLRAVEAGQMPVSVAVLISQAEDNEVQYVLQQAYE 184 I RKT L+++YVRGV LLE E RLLRAVE+G++PVSVAV I++A+D++VQ VL+QAYE Sbjct: 127 IARKTQLSLKYVRGVLRLLESREHRLLRAVESGKLPVSVAVDIAEAKDSDVQDVLRQAYE 186 Query: 185 EKLLRGQRLLAAKKLIEQRRRRGKGYKSGPRRVEGAPLSSNALLRAYRQDVDRKKVLIRK 244 LRG RL+AAK+L+E R++ GKG S R+ + LS L+R Y+ DV++K+VL+RK Sbjct: 187 NNQLRGGRLMAAKRLVEARQQYGKGQPSADRKKRRS-LSVEGLIRTYQNDVEKKQVLLRK 245 Query: 245 SNGTKARLIFILEALRKLLTEPDFLAILEAEKLDTLPKNLAVRL 288 + T+ L+FI EALRKLL + +F+ +L AE L T+PKNL+ RL Sbjct: 246 ATATRNELMFITEALRKLLNDENFVTLLRAEGLATIPKNLSDRL 289 >ref|ZP_07478584.1| transcriptional regulator [Brucella sp. BO1] gb|EFM55497.1| transcriptional regulator [Brucella sp. BO1] Length = 288 Score = 295 bits (755), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 150/288 (52%), Positives = 210/288 (72%), Gaps = 4/288 (1%) Query: 2 SSVQSIEIIPIGAIDVVNPRARNRRIFKDIVTSVAELGLKRPITV-RRKPGEGELRYDLV 60 + Q IE+IPI +I V+N R+RNR+ F++I+ ++ ++GLKRPITV RR EG YDLV Sbjct: 4 TPAQKIEMIPISSITVINARSRNRKQFREIIDNIGQIGLKRPITVARRMTSEGPC-YDLV 62 Query: 61 CGQGRLEAYEALGQRDIPAIIVDASTEDSAIMSLVENCARRQHRSIDLLHDIEGMRLRGY 120 CGQGR+EA+ ALGQ ++PA++V+A TED I SLVENCARR+ R++DLL+DI GM RG+ Sbjct: 63 CGQGRIEAFIALGQAEVPALVVNARTEDCYIASLVENCARRKLRAVDLLNDIAGMNRRGH 122 Query: 121 EFDEIGRKTGLTVEYVRGVSSLLEGGEQRLLRAVEAGQMPVSVAVLISQAEDNEVQYVLQ 180 +I R TGLT EY+ + SL+E GE+RLL+AV+ GQ+P S+A+ I+ A+D+E+Q LQ Sbjct: 123 SVPKIARMTGLTSEYIYAIISLIEKGEERLLKAVDCGQIPFSIALEIAGAQDHEIQSALQ 182 Query: 181 QAYEEKLLRGQRLLAAKKLIEQRRRRGKGYKSGPRRVEGAPLSSNALLRAYRQDVDRKKV 240 AYE LLRG++L+ AK+++E RR RGKG K R P+SS A+L+A+ D +KK+ Sbjct: 183 TAYESNLLRGRKLIQAKRIVEMRRLRGKGLKVYDSRAR--PMSSEAILKAFEADTTKKKM 240 Query: 241 LIRKSNGTKARLIFILEALRKLLTEPDFLAILEAEKLDTLPKNLAVRL 288 LI+++N K+RL FI+ ALR LL + ILE E L T+P+ LA +L Sbjct: 241 LIKRANAAKSRLAFIIAALRTLLLDSRLKPILEEEGLTTVPEVLARKL 288 >ref|ZP_01749680.1| Predicted transcriptional regulator [Roseobacter sp. CCS2] gb|EBA13663.1| Predicted transcriptional regulator [Roseobacter sp. CCS2] Length = 300 Score = 295 bits (754), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 150/286 (52%), Positives = 211/286 (73%), Gaps = 3/286 (1%) Query: 5 QSIEIIPIGAIDVVNPRARNRRIFKDIVTSVAELGLKRPITV--RRKPGEGELRYDLVCG 62 + E+I + AI VVNPR RN+++F +IV ++AELGLKRPITV R+ G+L Y+LVCG Sbjct: 8 EHTELIAVDAITVVNPRIRNQKVFDEIVANIAELGLKRPITVAARKNDECGDLTYELVCG 67 Query: 63 QGRLEAYEALGQRDIPAIIVDASTEDSAIMSLVENCARRQHRSIDLLHDIEGMRLRGYEF 122 QGRLEA++AL Q IPA+++ AS+ED +MSLVEN ARRQH S+DLL DI+ ++ GY Sbjct: 68 QGRLEAFKALKQEKIPAVVITASSEDCLVMSLVENLARRQHHSLDLLRDIKRLKDSGYSE 127 Query: 123 DEIGRKTGLTVEYVRGVSSLLEGGEQRLLRAVEAGQMPVSVAVLISQAEDNEVQYVLQQA 182 EI KT L+V+YV GV LLE E RLLRAVE+G++PVSVAV I++A+D VQ VL+QA Sbjct: 128 REIAAKTQLSVKYVHGVIRLLESHEHRLLRAVESGKIPVSVAVDIAEADDVGVQTVLRQA 187 Query: 183 YEEKLLRGQRLLAAKKLIEQRRRRGKGYKSGPRRVEGAPLSSNALLRAYRQDVDRKKVLI 242 YE K+LRG RL+AAK+L+E R++ GKG + +R LS LLR Y+ DV++KK+L+ Sbjct: 188 YESKVLRGGRLMAAKRLVEARKQFGKGRGTSDKRSR-KNLSVETLLRTYQNDVEKKKILL 246 Query: 243 RKSNGTKARLIFILEALRKLLTEPDFLAILEAEKLDTLPKNLAVRL 288 RK+ T++ ++F+ ++L+ L ++ +F+ +L AE L +PK +A RL Sbjct: 247 RKAGATRSEIMFLTQSLKTLFSDENFVTLLRAEGLSNIPKTIADRL 292 >ref|NP_767514.1| partitioning protein [Bradyrhizobium japonicum USDA 110] dbj|BAC46139.1| partitioning protein [Bradyrhizobium japonicum USDA 110] Length = 304 Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 148/285 (51%), Positives = 209/285 (73%), Gaps = 3/285 (1%) Query: 7 IEIIPIGAIDVVNPRARNRRIFKDIVTSVAELGLKRPITVRR-KPGEGELRYDLVCGQGR 65 I+ IPI I ++NPRARN+R F+DIV S+A++GLKRPITV EG RYDLVCGQGR Sbjct: 14 IKTIPINEIRILNPRARNQRNFQDIVESIAKVGLKRPITVSPCTSAEGPYRYDLVCGQGR 73 Query: 66 LEAYEALGQRDIPAIIVDASTEDSAIMSLVENCARRQHRSIDLLHDIEGMRLRGYEFDEI 125 +EA+ LGQ++IP+II+ A D +MSLVENCARR HR+IDLL +I +R RGY+ EI Sbjct: 74 IEAFLQLGQQEIPSIIIHAEESDCLVMSLVENCARRHHRAIDLLDEINTLRGRGYDEREI 133 Query: 126 GRKTGLTVEYVRGVSSLLEGGEQRLLRAVEAGQMPVSVAVLISQAEDNEVQYVLQQAYEE 185 RK G++ +YVR +S+LL GE+RL+ AVE G +P+++A+ I++ +DNEVQ L QAY E Sbjct: 134 ARKIGVSPDYVRMISTLLSKGEERLVHAVETGILPLNMAIEIARCDDNEVQRALTQAYTE 193 Query: 186 KLLRGQRLLAAKKLIEQRRRRGKGY--KSGPRRVEGAPLSSNALLRAYRQDVDRKKVLIR 243 K LRG +L+A +++IEQR+RRGK +S R PL+S +++R YRQ+ DR+++LI+ Sbjct: 194 KKLRGSKLVAVRRVIEQRQRRGKHLHGQSFGRPPSKRPLTSESMIRVYRQEADRQRLLIK 253 Query: 244 KSNGTKARLIFILEALRKLLTEPDFLAILEAEKLDTLPKNLAVRL 288 K+ T+ RL+F++EA+R L + DF+ +L+AE L +P L RL Sbjct: 254 KAEVTQNRLLFVVEAIRALREDTDFVRLLQAEDLAMMPSILQERL 298