BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0241.0081.p (288 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_420558.1| transcriptional regulator [Magnetospirillum mag... 350 2e-94 ref|ZP_07478585.1| transcriptional regulator [Brucella sp. BO1] ... 338 7e-91 ref|ZP_01749679.1| Predicted transcriptional regulator [Roseobac... 332 4e-89 ref|ZP_05123120.1| RepB plasmid partition [Rhodobacteraceae bact... 330 2e-88 ref|ZP_08862687.1| transcriptional regulator [Ruegeria sp. TW15] 326 3e-87 >ref|YP_420558.1| transcriptional regulator [Magnetospirillum magneticum AMB-1] dbj|BAE49999.1| Predicted transcriptional regulator [Magnetospirillum magneticum AMB-1] Length = 299 Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 163/288 (56%), Positives = 224/288 (77%) Query: 1 MGFEQRTLQVKLADIQPLKLVTEEVKRSAKYRQIAASVAEIGLVEPPVVTRSRDNSAKFL 60 M FE+R+ ++ ADIQPL+LV VK++ KY QIAAS+ ++G+VEPPVV + R K+L Sbjct: 12 MAFERRSQRIAFADIQPLRLVGPAVKKTPKYAQIAASIRDVGIVEPPVVAKDRSEEGKYL 71 Query: 61 LLDGHLRLEILRDRGLSEIECLISTEDEAFTYNKRVNRIAIIQEHRMILKAVENGVSEAR 120 LLDGHLR+EIL++ G + +CLI+T+DE FTYNKR+NRIAI+QEHRMILKA+E+GV E R Sbjct: 72 LLDGHLRIEILKEMGETSTDCLIATDDEGFTYNKRINRIAIVQEHRMILKAIEDGVPEER 131 Query: 121 IAKALNVDVASIRRRRKLLDGICAEAVELLKEKHLTLHTFSELRKLGPIRQIEAAELMIA 180 IA +LNVDVA +RR+ +L+GIC E VELL++KH+ ++TF +L+K+ PIRQIEAA+LMIA Sbjct: 132 IASSLNVDVAYLRRKTAILNGICPEVVELLQDKHVPINTFDQLKKMLPIRQIEAAQLMIA 191 Query: 181 MNNFSNSYVRSLVAATPRNQLAAGFTPRQHKGLSDEQLALMERESASLAREFKVAEQTYG 240 MN +S +Y +SLV+ATP +QL ++ GL+DEQ+ALME ESA L REF+ E++YG Sbjct: 192 MNKYSINYAKSLVSATPASQLINQKGAKRINGLTDEQIALMEEESAKLDREFRQIERSYG 251 Query: 241 VDHLDLVLAVGYLSKLLRNGKVVGYLAKQYQELLFEFQKITEAEATAA 288 DHLDLV+ G+L +LL N ++V YL Y EL EFQ++T+++ +A Sbjct: 252 SDHLDLVVINGFLDRLLGNNRIVRYLTLNYPELQAEFQRVTDSQKSAG 299 >ref|ZP_07478585.1| transcriptional regulator [Brucella sp. BO1] gb|EFM55498.1| transcriptional regulator [Brucella sp. BO1] Length = 296 Score = 338 bits (866), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 161/283 (56%), Positives = 224/283 (79%), Gaps = 4/283 (1%) Query: 1 MGFEQRTLQVKLADIQPLKLVTEEVKRSAKYRQIAASVAEIGLVEPPVVTRSRDNSAKFL 60 + FE +L++ L I PL+ +T RS+KY QIAAS+AEIGL+EPPVV R + N+ F Sbjct: 12 LAFETTSLRISLDSILPLRPMTPAALRSSKYAQIAASIAEIGLIEPPVVVRDKQNATLFH 71 Query: 61 LLDGHLRLEILRDRGLSEIECLISTEDEAFTYNKRVNRIAIIQEHRMILKAVENGVSEAR 120 LLDGHLRL++LR RG +E+ CL++TEDEAFTYNKR++R+A IQEH+MI+KA+E GVSE R Sbjct: 72 LLDGHLRLDVLRKRGDTEVVCLVATEDEAFTYNKRISRLATIQEHKMIMKAIEKGVSEER 131 Query: 121 IAKALNVDVASIRRRRKLLDGICAEAVELLKEKHLTLHTFSELRKLGPIRQIEAAELMIA 180 +A+ALNV++ SI+ +++LLDGIC EA ELLK++H+ L++ S+++KL P+RQIE AELMIA Sbjct: 132 LARALNVNINSIKAKKRLLDGICPEAAELLKDRHVPLNSMSQIKKLKPMRQIEVAELMIA 191 Query: 181 MNNFSNSYVRSLVAATPRNQLAAGFTPRQ-HKGLSDEQLALMERESASLAREFKVAEQTY 239 MNN+S SY SLV +TP + L A P++ KGL+ EQ++ MERE+A+L +EFK+AE+ Y Sbjct: 192 MNNYSQSYANSLVLSTPESMLIA---PKKAAKGLTLEQISRMERETANLEKEFKIAEEDY 248 Query: 240 GVDHLDLVLAVGYLSKLLRNGKVVGYLAKQYQELLFEFQKITE 282 G D++DLV+A GY+ +LL N +VV LA+ Y E+L EFQ+I+E Sbjct: 249 GKDNIDLVIATGYVGRLLENVRVVRQLAQYYPEILAEFQRISE 291 >ref|ZP_01749679.1| Predicted transcriptional regulator [Roseobacter sp. CCS2] gb|EBA13662.1| Predicted transcriptional regulator [Roseobacter sp. CCS2] Length = 299 Score = 332 bits (851), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 156/287 (54%), Positives = 221/287 (77%) Query: 2 GFEQRTLQVKLADIQPLKLVTEEVKRSAKYRQIAASVAEIGLVEPPVVTRSRDNSAKFLL 61 FE+ ++ I PL +VT + K + K+++I AS+AEIGLVEP VVTR R + ++ L Sbjct: 13 AFERDLRRIAFDHIAPLYVVTPQTKETVKFKRIVASIAEIGLVEPIVVTRDRQDPTQYTL 72 Query: 62 LDGHLRLEILRDRGLSEIECLISTEDEAFTYNKRVNRIAIIQEHRMILKAVENGVSEARI 121 LDGHLRLE+L+D+G+SE C+IST+DEAFTYNKR++R+A IQEH+MIL+A+ G SE R+ Sbjct: 73 LDGHLRLEVLKDQGVSETPCIISTDDEAFTYNKRISRLATIQEHKMILRALTLGASEERL 132 Query: 122 AKALNVDVASIRRRRKLLDGICAEAVELLKEKHLTLHTFSELRKLGPIRQIEAAELMIAM 181 AKALNV++ +++ +R+LLDGIC EA E+LK+K + L F L+K+ P+RQIEAA+LM+ M Sbjct: 133 AKALNVNIKTLQEKRRLLDGICPEAAEMLKDKQVALTGFRILKKMKPMRQIEAAQLMMTM 192 Query: 182 NNFSNSYVRSLVAATPRNQLAAGFTPRQHKGLSDEQLALMERESASLAREFKVAEQTYGV 241 N ++ +Y +SL+A TP +QL +G TP++ KG+S EQL LMERESA+L RE ++ E +YG Sbjct: 193 NKYTVNYAQSLLAGTPESQLVSGATPKKIKGISREQLDLMERESANLEREVRLVEDSYGA 252 Query: 242 DHLDLVLAVGYLSKLLRNGKVVGYLAKQYQELLFEFQKITEAEATAA 288 DHLDLVLA GY+++L+ N ++ YLA ++E L EF+KITE EA A+ Sbjct: 253 DHLDLVLARGYVTRLVSNERITKYLALHHEEFLPEFEKITEREAFAS 299 >ref|ZP_05123120.1| RepB plasmid partition [Rhodobacteraceae bacterium KLH11] gb|EEE37752.1| RepB plasmid partition [Rhodobacteraceae bacterium KLH11] Length = 299 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 158/284 (55%), Positives = 218/284 (76%) Query: 2 GFEQRTLQVKLADIQPLKLVTEEVKRSAKYRQIAASVAEIGLVEPPVVTRSRDNSAKFLL 61 FEQ + + +I PL ++T + K S K++QIAASV EIGLVEP VV+R N+ ++ L Sbjct: 13 AFEQELVTLSFENIAPLYVLTPQKKASIKFKQIAASVQEIGLVEPIVVSRDPYNAGQYSL 72 Query: 62 LDGHLRLEILRDRGLSEIECLISTEDEAFTYNKRVNRIAIIQEHRMILKAVENGVSEARI 121 LDGHLRLE+L+D+G + CL+ST+DEAFTYNKR++R+A IQEH+MIL+A+ GV EAR+ Sbjct: 73 LDGHLRLEVLKDQGQTHARCLVSTDDEAFTYNKRISRLATIQEHKMILRALSLGVPEARL 132 Query: 122 AKALNVDVASIRRRRKLLDGICAEAVELLKEKHLTLHTFSELRKLGPIRQIEAAELMIAM 181 A ALNV++ +++++R+LLDGIC EA ELLK+K +TL F L+K+ PIRQIEAA+LM+AM Sbjct: 133 ASALNVNIKTLKQKRQLLDGICDEAAELLKDKQVTLTGFQILKKMKPIRQIEAAQLMVAM 192 Query: 182 NNFSNSYVRSLVAATPRNQLAAGFTPRQHKGLSDEQLALMERESASLAREFKVAEQTYGV 241 N F+ +Y RSL+AATP QL + TP++ KG+S EQLALMERESA+L RE ++ E +YG Sbjct: 193 NKFTINYARSLLAATPERQLVSAATPKKIKGISREQLALMERESANLEREVRLVEDSYGA 252 Query: 242 DHLDLVLAVGYLSKLLRNGKVVGYLAKQYQELLFEFQKITEAEA 285 DHLDLVL G+++KL+R+ ++ YL+ + L F+KITE EA Sbjct: 253 DHLDLVLTRGFIAKLMRSEQITRYLSLHHDAFLPAFEKITENEA 296 >ref|ZP_08862687.1| transcriptional regulator [Ruegeria sp. TW15] Length = 299 Score = 326 bits (835), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 160/288 (55%), Positives = 212/288 (73%) Query: 1 MGFEQRTLQVKLADIQPLKLVTEEVKRSAKYRQIAASVAEIGLVEPPVVTRSRDNSAKFL 60 M FE+ +Q+ L I PL V +E K + KYRQ+ AS+ E+GLVEP VV R + + K++ Sbjct: 12 MAFEKDLIQLPLEQICPLYAVRKETKDTVKYRQVVASIREVGLVEPLVVVRGQSDPEKYM 71 Query: 61 LLDGHLRLEILRDRGLSEIECLISTEDEAFTYNKRVNRIAIIQEHRMILKAVENGVSEAR 120 LLDGH+RL IL D G + C +ST+DEAFTYNKR++R+A IQEH+MILKA+E GV E R Sbjct: 72 LLDGHVRLAILSDLGEQDAPCQVSTDDEAFTYNKRISRLATIQEHKMILKALERGVPEER 131 Query: 121 IAKALNVDVASIRRRRKLLDGICAEAVELLKEKHLTLHTFSELRKLGPIRQIEAAELMIA 180 +A+ALNV+V S++ +++LLDGIC EA ELLK+K + L F L+K+ P+RQIEAAELM+ Sbjct: 132 LARALNVNVKSLQDKKRLLDGICPEAAELLKDKQVALTGFQILKKMKPMRQIEAAELMVT 191 Query: 181 MNNFSNSYVRSLVAATPRNQLAAGFTPRQHKGLSDEQLALMERESASLAREFKVAEQTYG 240 MN ++ +Y RSL+AATP +QL P+ KG+S +QL LMERESA+L RE ++ E TYG Sbjct: 192 MNKYTVNYARSLLAATPASQLKDPEKPKAVKGISRQQLELMERESANLERELRLVEDTYG 251 Query: 241 VDHLDLVLAVGYLSKLLRNGKVVGYLAKQYQELLFEFQKITEAEATAA 288 DHLDLVLA GY+SKL+ N +V YL + E L EF+KITE EA A+ Sbjct: 252 SDHLDLVLARGYVSKLITNARVTRYLEMYHPEFLPEFEKITETEALAS 299