BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0241.0074.p         (139 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EFV83364.1| ABC transporter like protein [Achromobacter xylos...   122   1e-26
gb|EGP44885.1| ABC transporter family protein 29 [Achromobacter ...   122   2e-26
ref|ZP_06686733.1| branched-chain amino acid ABC superfamily ATP...   121   3e-26
ref|ZP_06897401.1| ABC superfamily ATP binding cassette transpor...   117   7e-25
gb|AEJ26972.1| Branched-chain amino acid transport ATP-binding p...   116   1e-24

>gb|EFV83364.1| ABC transporter like protein [Achromobacter xylosoxidans C54]
          Length = 253

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/114 (51%), Positives = 84/114 (73%), Gaps = 1/114 (0%)

Query: 8   VLAADGLSKRFGGNTVVDRLSISFANGRLHSILGPNGAGKTTLFNLLTKDISPDGGTIRL 67
           VL+A GL KRFGG   VD +S++   G +H+++GPNGAGKTT FNLLTK ++PD GTI  
Sbjct: 6   VLSAQGLVKRFGGFNAVDGVSLALREGSIHALIGPNGAGKTTCFNLLTKFLTPDQGTIHY 65

Query: 68  DGSDVTRLSPDRIARRGVARSYQISSVYLDMSVRDNVWVSAYRARGGNPLVFWR 121
            G D+T L+P++IAR G+ RS+QIS+V+L ++V  N+ V+  R + G+ + FWR
Sbjct: 66  RGRDITALAPEQIARLGIVRSFQISAVFLGLTVLQNMRVALMR-QHGDGMRFWR 118


>gb|EGP44885.1| ABC transporter family protein 29 [Achromobacter xylosoxidans
           AXX-A]
          Length = 253

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/114 (51%), Positives = 83/114 (72%), Gaps = 1/114 (0%)

Query: 8   VLAADGLSKRFGGNTVVDRLSISFANGRLHSILGPNGAGKTTLFNLLTKDISPDGGTIRL 67
           VL+A GL KRFGG   VD +S++   G +H+++GPNGAGKTT FNLLTK ++PD G I  
Sbjct: 6   VLSAQGLVKRFGGFNAVDGVSLALREGSIHALIGPNGAGKTTCFNLLTKFLTPDQGVIHY 65

Query: 68  DGSDVTRLSPDRIARRGVARSYQISSVYLDMSVRDNVWVSAYRARGGNPLVFWR 121
            G D+T L+P++IAR G+ RS+QIS+V+L ++V  N+ V+  R + G+ L FWR
Sbjct: 66  RGRDITSLAPEQIARLGIVRSFQISAVFLGLTVLQNMRVALMR-QHGDGLRFWR 118


>ref|ZP_06686733.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, ABC protein [Achromobacter piechaudii ATCC
           43553]
 gb|EFF76277.1| branched-chain amino acid ABC superfamily ATP binding cassette
           transporter, ABC protein [Achromobacter piechaudii ATCC
           43553]
          Length = 256

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 59/120 (49%), Positives = 85/120 (70%), Gaps = 1/120 (0%)

Query: 2   TSQDHIVLAADGLSKRFGGNTVVDRLSISFANGRLHSILGPNGAGKTTLFNLLTKDISPD 61
           TS    VL+A GL KRFGG   VD ++++   G +H+++GPNGAGKTT FNLLTK ++PD
Sbjct: 3   TSSTPAVLSAQGLVKRFGGFNAVDGVTLALHEGSIHALIGPNGAGKTTCFNLLTKFLTPD 62

Query: 62  GGTIRLDGSDVTRLSPDRIARRGVARSYQISSVYLDMSVRDNVWVSAYRARGGNPLVFWR 121
            G I   G D+T L+P++IAR G+ RS+QIS+V+L ++V  N+ V+  R + G+ + FWR
Sbjct: 63  EGVIHYRGRDITALAPEQIARLGIVRSFQISAVFLGLTVLQNMRVALMR-QHGDGMRFWR 121


>ref|ZP_06897401.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Roseomonas cervicalis ATCC 49957]
 gb|EFH10892.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Roseomonas cervicalis ATCC 49957]
          Length = 258

 Score =  117 bits (292), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 58/114 (50%), Positives = 78/114 (68%), Gaps = 1/114 (0%)

Query: 8   VLAADGLSKRFGGNTVVDRLSISFANGRLHSILGPNGAGKTTLFNLLTKDISPDGGTIRL 67
           +L  DG++K F G   V  +S+    G +H ++GPNGAGKTT FNLLTK + P  G+IR 
Sbjct: 5   ILETDGMTKEFLGFVAVGDVSLKVRRGSIHGLIGPNGAGKTTCFNLLTKFLPPTRGSIRF 64

Query: 68  DGSDVTRLSPDRIARRGVARSYQISSVYLDMSVRDNVWVSAYRARGGNPLVFWR 121
           DG D+TRL P  +AR G+ RS+QIS+V+  +SV +NV V+  RARGG+   FWR
Sbjct: 65  DGRDITRLKPAEVARLGLVRSFQISAVFPHLSVLENVRVALQRARGGS-FDFWR 117


>gb|AEJ26972.1| Branched-chain amino acid transport ATP-binding protein [Paracoccus
           denitrificans SD1]
          Length = 295

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/128 (46%), Positives = 86/128 (67%), Gaps = 2/128 (1%)

Query: 1   MTSQDHIVLAADGLSKRFGGNTVVDRLSISFANGRLHSILGPNGAGKTTLFNLLTKDISP 60
           M ++  +VL+A GL K F G T V+ + +   + R+H+++GPNGAGKTT+FNLLTK + P
Sbjct: 1   MQAEPRVVLSARGLGKDFAGFTAVNNVDLDVEHARIHALIGPNGAGKTTVFNLLTKFLQP 60

Query: 61  DGGTIRLDGSDVTRLSPDRIARRGVARSYQISSVYLDMSVRDNVWVSAYRARGGNPLVFW 120
             G I L G D+TR  PD++AR G+ RS+QIS+V+  ++VR+NV V+  R   G  + FW
Sbjct: 61  TRGRITLLGQDITRTPPDKVARMGLVRSFQISAVFPHLTVRENVKVALQRP-AGLAVQFW 119

Query: 121 RXPMPRRG 128
             P+ R G
Sbjct: 120 -LPLTRAG 126