BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0241.0070.p         (123 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_470974.1| hypothetical protein RHE_CH03491 [Rhizobium etl...   137   6e-31
ref|ZP_03516136.1| hypothetical protein RetlI_11524 [Rhizobium e...   135   1e-30
ref|YP_002977312.1| XRE family transcriptional regulator [Rhizob...   135   2e-30
ref|ZP_03503820.1| hypothetical protein RetlK5_31869 [Rhizobium ...   135   3e-30
ref|YP_769578.1| hypothetical protein RL4001 [Rhizobium legumino...   134   5e-30

>ref|YP_470974.1| hypothetical protein RHE_CH03491 [Rhizobium etli CFN 42]
 gb|ABC92247.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 178

 Score =  137 bits (344), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 66/117 (56%), Positives = 86/117 (73%)

Query: 6   SAQDAGLKRLVESSSHKVHLVCDLTHRLLAASASRQAEWRTDVSEFLGKSLLVYASPEIL 65
           +A DA LKRLVE S   VHL+CD TH+L++AS  RQAEWR  +  FLG+SL  YAS EI 
Sbjct: 61  AAADAALKRLVEDSVRPVHLICDSTHQLMSASRPRQAEWRAPLGAFLGRSLFSYASAEIA 120

Query: 66  AADTTLDDLGWYDGQLGSLEVETGPNFDANLVIAPGRLLWERITLADGTPARLVTTI 122
           AA+ +L++ GW++G+L +L  +TG N +  L IAPGR+ WERI L+DG+  RLVTTI
Sbjct: 121 AAEQSLEECGWHEGRLLTLTFDTGANGNVRLPIAPGRVTWERIRLSDGSAGRLVTTI 177


>ref|ZP_03516136.1| hypothetical protein RetlI_11524 [Rhizobium etli IE4771]
          Length = 135

 Score =  135 bits (341), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/114 (57%), Positives = 83/114 (72%)

Query: 9   DAGLKRLVESSSHKVHLVCDLTHRLLAASASRQAEWRTDVSEFLGKSLLVYASPEILAAD 68
           DA LKRLVE     VHL+CD THRLL+AS  RQ+EWR  +  FLG+SL  YAS EI AA+
Sbjct: 11  DAALKRLVEDCLRPVHLICDSTHRLLSASRPRQSEWRAPIGAFLGRSLFPYASAEIAAAE 70

Query: 69  TTLDDLGWYDGQLGSLEVETGPNFDANLVIAPGRLLWERITLADGTPARLVTTI 122
            +L+  GW+DG+L SL  +TG N +A L IA GR++WERI L+DG+  RLVTT+
Sbjct: 71  QSLEACGWHDGRLMSLTFDTGANGNARLPIAAGRVIWERIMLSDGSAGRLVTTV 124


>ref|YP_002977312.1| XRE family transcriptional regulator [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gb|ACS57773.1| transcriptional regulator, XRE family [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 178

 Score =  135 bits (339), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/118 (57%), Positives = 84/118 (71%)

Query: 5   ESAQDAGLKRLVESSSHKVHLVCDLTHRLLAASASRQAEWRTDVSEFLGKSLLVYASPEI 64
            +A DA LKRLVE S   VHL+CD THRLLA S  R AEWR  +  FLG+SL  YAS EI
Sbjct: 60  HAAVDAALKRLVEDSVRPVHLICDRTHRLLATSRPRHAEWRAPLGAFLGRSLFSYASAEI 119

Query: 65  LAADTTLDDLGWYDGQLGSLEVETGPNFDANLVIAPGRLLWERITLADGTPARLVTTI 122
            AA+ +L++ GW+ G+L SL ++TG N +A L IA GR+ WERI L+DG+  RLVTTI
Sbjct: 120 AAAEQSLEERGWHAGRLSSLTLDTGANGNALLPIAAGRMTWERIMLSDGSAGRLVTTI 177


>ref|ZP_03503820.1| hypothetical protein RetlK5_31869 [Rhizobium etli Kim 5]
          Length = 188

 Score =  135 bits (339), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 65/114 (57%), Positives = 82/114 (71%)

Query: 9   DAGLKRLVESSSHKVHLVCDLTHRLLAASASRQAEWRTDVSEFLGKSLLVYASPEILAAD 68
           DA LKRLVE     VHL+CD THRLL+AS  RQ+EWR  +  FLG+SL  YAS EI AA+
Sbjct: 64  DAALKRLVEDCLRPVHLICDSTHRLLSASRPRQSEWRAPIGAFLGRSLFPYASAEIAAAE 123

Query: 69  TTLDDLGWYDGQLGSLEVETGPNFDANLVIAPGRLLWERITLADGTPARLVTTI 122
            +L+  GW+DG+L S   +TG N +A L IA GR++WERI L+DG+  RLVTT+
Sbjct: 124 QSLEACGWHDGRLMSFTFDTGANGNARLPIAVGRVIWERIMLSDGSAGRLVTTV 177


>ref|YP_769578.1| hypothetical protein RL4001 [Rhizobium leguminosarum bv. viciae
           3841]
 emb|CAK09491.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 178

 Score =  134 bits (337), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 83/111 (74%)

Query: 12  LKRLVESSSHKVHLVCDLTHRLLAASASRQAEWRTDVSEFLGKSLLVYASPEILAADTTL 71
           LKRLVE S   VHL+CD THRLL+AS  RQAEWR  +  FLG+SL  YAS EI AA+ +L
Sbjct: 67  LKRLVEDSVRPVHLICDRTHRLLSASRPRQAEWRAPLGAFLGRSLFSYASAEIAAAEQSL 126

Query: 72  DDLGWYDGQLGSLEVETGPNFDANLVIAPGRLLWERITLADGTPARLVTTI 122
           ++ GW++G+L SL ++TG N +A L IA GR+ WERI L+DG+  RLVTTI
Sbjct: 127 EERGWHEGRLSSLTLDTGANGNALLPIAAGRVTWERIMLSDGSTGRLVTTI 177