BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0241.0061.p (371 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_05342149.1| FAD dependent oxidoreductase [Thalassiobium s... 356 3e-96 ref|ZP_00998651.1| hypothetical protein OB2597_10606 [Oceanicola... 337 2e-90 ref|YP_470352.1| sarcosine oxidase [Rhizobium etli CFN 42] >gi|8... 281 1e-73 gb|EGE58505.1| putative sarcosine oxidase protein [Rhizobium etl... 278 9e-73 ref|YP_001979135.1| sarcosine oxidase [Rhizobium etli CIAT 652] ... 278 1e-72 >ref|ZP_05342149.1| FAD dependent oxidoreductase [Thalassiobium sp. R2A62] gb|EET47816.1| FAD dependent oxidoreductase [Thalassiobium sp. R2A62] Length = 390 Score = 356 bits (914), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 177/363 (48%), Positives = 240/363 (66%) Query: 1 VIGRGLIGSAAARHLSKMGHDVALIGPDEPADLSRHGGVFGSHYDAGRITRSYDPGPFWR 60 V+GRGLIGSAAARHL+ MGH+V LIGP EP + + H G FGSHYD GRITR DP PFW Sbjct: 18 VVGRGLIGSAAARHLTLMGHEVTLIGPSEPTEFATHNGPFGSHYDEGRITRGLDPYPFWS 77 Query: 61 QANRAAISRYGEISAESGVEFYREAGALHVGHSETTDVASIGSICAEDGILCEAYHDAGL 120 + + A+ISRY +I A SGV F+ E GA+ G +++ V S+ ++ A +G++ E + A + Sbjct: 78 RVSLASISRYRDIEAASGVPFFNEVGAMMSGPADSDYVHSLETVMAGNGVMAERFDGAEI 137 Query: 121 AERFPFLKSTAGMQGYFEPRNAGYISPRRLVRAQTIAAERAGTRIIDEPALGISESGSGV 180 A RFP+ + + Y++P+ AG+ISPR LVRAQ IAA R G +IID L + + +G Sbjct: 138 AARFPYFQFPDDTRAYYQPKEAGHISPRNLVRAQGIAATRGGAQIIDAEVLDVRDGVTGA 197 Query: 181 TIRTRSGSIEAERVLVAAGGHTQSLLGRSLGFTVYGRTAALFRLGAAETQRLAEMPSMRC 240 I+ ++ +R +VAAGG T L+ +L TVY RT A+FR+ AE RLA MPS+ Sbjct: 198 VIKLAGQTLRFDRAIVAAGGFTNKLMDDALPLTVYARTVAMFRVTDAEAARLAWMPSLIH 257 Query: 241 LGPKGDNPYILPPISYPDGQTWLKLGGDPVDLPLDSEADIKDWFRSGGSIEVADRLQGQI 300 + P G++PY+LP I YPDG +LK+GGD VD+ L ++ D++DWFRSGGS+EV + L I Sbjct: 258 VYPTGEDPYLLPAIKYPDGHHYLKIGGDRVDIELTNDEDMRDWFRSGGSVEVGEMLTDMI 317 Query: 301 LDRIRDLAFEERRVVPCMTTFGDSGLPCIGPLSERVTVAFCCYGKSAKCSDELGRLGGMA 360 DR+ DLA +E V PC+TTF P I L + VA G+ AK SDELGRL A Sbjct: 318 RDRMPDLAIQEVVVKPCVTTFTPHNHPIIDMLGNHIAVAVAGCGRGAKNSDELGRLAAEA 377 Query: 361 LLG 363 ++G Sbjct: 378 VMG 380 >ref|ZP_00998651.1| hypothetical protein OB2597_10606 [Oceanicola batsensis HTCC2597] gb|EAQ03687.1| hypothetical protein OB2597_10606 [Oceanicola batsensis HTCC2597] Length = 375 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 177/361 (49%), Positives = 229/361 (63%) Query: 1 VIGRGLIGSAAARHLSKMGHDVALIGPDEPADLSRHGGVFGSHYDAGRITRSYDPGPFWR 60 VIG GLIGSAAARHL++ G DV LIGP EPAD + H GVF SHYD GRITR DP PFW Sbjct: 5 VIGAGLIGSAAARHLARQGRDVTLIGPGEPADKTAHDGVFASHYDEGRITRGLDPMPFWS 64 Query: 61 QANRAAISRYGEISAESGVEFYREAGALHVGHSETTDVASIGSICAEDGILCEAYHDAGL 120 +A+RAAI+RY EI SG+ FY E G L G + V ++ ++ A D I CE + DA L Sbjct: 65 RASRAAIARYAEIEEASGIRFYSEVGCLMAGPEGSPQVENMRAVAARDAIPCEEHDDASL 124 Query: 121 AERFPFLKSTAGMQGYFEPRNAGYISPRRLVRAQTIAAERAGTRIIDEPALGISESGSGV 180 + RFP FE ++AG+ISPR L RAQ +AA RAG R I G E+ GV Sbjct: 125 SGRFPCFAFPPDTAALFEAKDAGHISPRALTRAQIVAATRAGARHIAAEVTGFDETAGGV 184 Query: 181 TIRTRSGSIEAERVLVAAGGHTQSLLGRSLGFTVYGRTAALFRLGAAETQRLAEMPSMRC 240 + T + ++ +R+L+A GG ++ LL L VY RT ALF + A ET+RLA MPS+ Sbjct: 185 RVTTAAETLTFDRILLATGGFSRLLLQDRLPIEVYARTVALFEIDAVETRRLAGMPSLIY 244 Query: 241 LGPKGDNPYILPPISYPDGQTWLKLGGDPVDLPLDSEADIKDWFRSGGSIEVADRLQGQI 300 L P+G+NPY+LPPI YPDG+T+LK+GGDP D+ L + ++ DWFRS G+ V ++ I Sbjct: 245 LDPEGENPYLLPPIRYPDGRTYLKMGGDPEDVVLTTRQELADWFRSPGTPGVGAAIEAMI 304 Query: 301 LDRIRDLAFEERRVVPCMTTFGDSGLPCIGPLSERVTVAFCCYGKSAKCSDELGRLGGMA 360 DR+ L E + C+TT+ P I LS+RV A G++AK SDELGRLG + Sbjct: 305 RDRMPGLRIERSATMSCVTTYTPDEHPHITALSDRVFTAIGGCGRAAKNSDELGRLGALR 364 Query: 361 L 361 L Sbjct: 365 L 365 >ref|YP_470352.1| sarcosine oxidase [Rhizobium etli CFN 42] gb|ABC91625.1| probable sarcosine oxidase protein [Rhizobium etli CFN 42] Length = 391 Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 165/373 (44%), Positives = 220/373 (58%), Gaps = 6/373 (1%) Query: 1 VIGRGLIGSAAARHLSKMGHDVALIGPDEPADLSRHGGVFGSHYDAGRITRSYDPGPFWR 60 V+GRGL+G+AAARHL++ VA+IGPDEP D H GVF SHYD GRITR+ D W Sbjct: 9 VVGRGLMGAAAARHLARQTDGVAVIGPDEPDDRKAHQGVFASHYDEGRITRTIDADRNWA 68 Query: 61 QANRAAISRYGEISAESGVEFYREAGALHVGHSETTDVASIGSICAEDGILCEAYHDAGL 120 +I RYGEI+ ESG++FYREAG + V + + G+ GL Sbjct: 69 LLANRSIDRYGEIANESGIDFYREAGCVVVAPDGSDYLERTRQAAVSLGLETRLLDAGGL 128 Query: 121 AERFPFLKSTAGMQGYFEPRNAGYISPRRLVRAQTIAAERAGTRIIDEPALGISESGSGV 180 FPF AG G FE AG+ISPR+LV+AQ++ AERAG II + + I E G Sbjct: 129 KTAFPFFAFPAGSAGVFEATGAGHISPRKLVKAQSLLAERAGATIIRDYVVSIREEGGLA 188 Query: 181 TIRTRSG-SIEAERVLVAAGGHT--QSLLGRSLGFTVYGRTAALFRLGAAETQRLAEMPS 237 T+ T G + +E+VL+AAGG + ++LL R + TVYGRT LF +G A+ RLA MPS Sbjct: 189 TVETAGGLAYRSEKVLLAAGGFSIAENLLPRPVAMTVYGRTVTLFEVGEADALRLAAMPS 248 Query: 238 MRCLGPKGDNPYILPPISYPDGQTWLKLGGDPVDLPLDSEADIKDWFRSGGSIEVADRLQ 297 + L G + Y+LPPI YPDG+ +LK+GGDP DL L ++ +++ WFR+ G V LQ Sbjct: 249 L-ILDVPGIHIYLLPPIRYPDGKFYLKIGGDPDDLVLHNDIEMRAWFRTEGRESVRVHLQ 307 Query: 298 GQILDRIRDLAFEERRVVPCMTTFGDSGLPCIGPLSER-VTVAFCCYGKSAKCSDELGRL 356 + D + D+ C+ +F +S P IG S + V C G SAK SDE+GRL Sbjct: 308 RIVADLMPDMMPLSISTAACVVSFTESSYPMIGYTSSPGIAVLTGCAGTSAKSSDEIGRL 367 Query: 357 GGMALL-GEVRAE 368 G LL G +R + Sbjct: 368 GAELLLSGRIREQ 380 >gb|EGE58505.1| putative sarcosine oxidase protein [Rhizobium etli CNPAF512] Length = 391 Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 161/366 (43%), Positives = 213/366 (58%), Gaps = 5/366 (1%) Query: 1 VIGRGLIGSAAARHLSKMGHDVALIGPDEPADLSRHGGVFGSHYDAGRITRSYDPGPFWR 60 V+GRGL+G+AAARHL++ VA+IGPDEPAD H GVF SHYD GRITR+ DP W Sbjct: 9 VVGRGLMGAAAARHLARQTDGVAVIGPDEPADRKTHQGVFASHYDEGRITRTIDPDRNWA 68 Query: 61 QANRAAISRYGEISAESGVEFYREAGALHVGHSETTDVASIGSICAEDGILCEAYHDAGL 120 +I RYGEI +SG++FYRE G + V +E+ + G+ + L Sbjct: 69 LLANRSIGRYGEIVRDSGIDFYREVGCVVVAPNESDYLGRSRQAAVSLGVETRLLDEGAL 128 Query: 121 AERFPFLKSTAGMQGYFEPRNAGYISPRRLVRAQTIAAERAGTRIIDEPALGISESGSGV 180 FPF G G FE + AG+ISPR+LV+AQ++ AE+AG +I + + I E G Sbjct: 129 QGAFPFFAFADGCAGVFEAKGAGHISPRKLVKAQSLLAEKAGAAVIRDNVVSIREEGGSA 188 Query: 181 TIRTRSG-SIEAERVLVAAGGHT--QSLLGRSLGFTVYGRTAALFRLGAAETQRLAEMPS 237 +RT G + AE+VL+AAGG + ++LL R + TVYGRT LF + A+ LA MPS Sbjct: 189 VVRTAGGLAYRAEKVLLAAGGFSIAENLLPRPVEMTVYGRTVTLFEVSEADAIHLAGMPS 248 Query: 238 MRCLGPKGDNPYILPPISYPDGQTWLKLGGDPVDLPLDSEADIKDWFRSGGSIEVADRLQ 297 + L G + Y+LPPI YPDG+ +LK+GGDP DL L +E ++ WFR+ G V LQ Sbjct: 249 L-ILDVPGIHIYLLPPIRYPDGKFYLKIGGDPDDLVLSNETKMRAWFRTEGRESVRAHLQ 307 Query: 298 GQILDRIRDLAFEERRVVPCMTTFGDSGLPCIGPLSE-RVTVAFCCYGKSAKCSDELGRL 356 + D DL C+ + SG P IG S + V C G SAK SDE+GRL Sbjct: 308 RIVADLAPDLTPLSISTAACVVSRTQSGYPMIGYTSSPAIAVMTGCAGTSAKSSDEIGRL 367 Query: 357 GGMALL 362 G LL Sbjct: 368 GAELLL 373 >ref|YP_001979135.1| sarcosine oxidase [Rhizobium etli CIAT 652] gb|ACE91957.1| probable sarcosine oxidase protein [Rhizobium etli CIAT 652] Length = 391 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 160/366 (43%), Positives = 214/366 (58%), Gaps = 5/366 (1%) Query: 1 VIGRGLIGSAAARHLSKMGHDVALIGPDEPADLSRHGGVFGSHYDAGRITRSYDPGPFWR 60 V+GRGL+G+AAARHL++ VA+IGPDEPAD H GVF SHYD GRITR+ DP W Sbjct: 9 VVGRGLMGAAAARHLARQTDGVAVIGPDEPADRKTHQGVFASHYDEGRITRTIDPDRNWA 68 Query: 61 QANRAAISRYGEISAESGVEFYREAGALHVGHSETTDVASIGSICAEDGILCEAYHDAGL 120 +I RYGEI+ +SG++FYRE G + V + + + G+ + L Sbjct: 69 LLANRSIGRYGEIARDSGIDFYREVGCVVVAPNGSDYLGRTRQAAVSLGVETRLLDEGAL 128 Query: 121 AERFPFLKSTAGMQGYFEPRNAGYISPRRLVRAQTIAAERAGTRIIDEPALGISESGSGV 180 FPF G G FE + AG+ISPR+LV+AQ++ AE+AG +I + + I E G Sbjct: 129 QGAFPFFAFADGCAGIFEAKGAGHISPRKLVKAQSLLAEKAGAAVIRDNVVSIREEGGSA 188 Query: 181 TIRTRSG-SIEAERVLVAAGGHT--QSLLGRSLGFTVYGRTAALFRLGAAETQRLAEMPS 237 +RT G + AE+VL+AAGG + ++LL R + TVYGRT LF + A+ LA MPS Sbjct: 189 VVRTAGGLAYRAEKVLLAAGGFSIAENLLPRPVEMTVYGRTVTLFEVSEADAIHLAGMPS 248 Query: 238 MRCLGPKGDNPYILPPISYPDGQTWLKLGGDPVDLPLDSEADIKDWFRSGGSIEVADRLQ 297 + L G + Y+LPPI YPDG+ +LK+GGDP DL L +E +++ WFR+ G V LQ Sbjct: 249 L-ILDVPGIHIYLLPPIRYPDGKFYLKIGGDPDDLVLSNETEMRAWFRTEGRESVRAHLQ 307 Query: 298 GQILDRIRDLAFEERRVVPCMTTFGDSGLPCIGPLSE-RVTVAFCCYGKSAKCSDELGRL 356 + D DL C+ + SG P IG S + V C G SAK SDE+GRL Sbjct: 308 RIVADLAPDLTPLSISTAACVVSQTQSGYPMIGYTSSPAIAVMTGCAGTSAKSSDEIGRL 367 Query: 357 GGMALL 362 G LL Sbjct: 368 GAELLL 373