BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0241.0057.p (157 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_434570.1| hypothetical protein HCH_03395 [Hahella chejuen... 228 2e-58 ref|YP_002362511.1| 3-demethylubiquinone-9 3-methyltransferase [... 226 6e-58 ref|ZP_07029771.1| 3-demethylubiquinone-9 3-methyltransferase [A... 221 2e-56 ref|NP_968744.1| hypothetical protein Bd1884 [Bdellovibrio bacte... 219 8e-56 ref|NP_840356.1| hypothetical protein NE0266 [Nitrosomonas europ... 216 1e-54 >ref|YP_434570.1| hypothetical protein HCH_03395 [Hahella chejuensis KCTC 2396] gb|ABC30145.1| uncharacterized protein conserved in bacteria [Hahella chejuensis KCTC 2396] Length = 161 Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 106/156 (67%), Positives = 129/156 (82%), Gaps = 2/156 (1%) Query: 1 MTDLVTCLWFDQGKAREAAEFYAATFPDSHVGAGHQSP--IPGIGQGEELTVEFTVLGRR 58 M++LVTCLWFD G+A +AAEFYAATFPDSHVG + +P PG +G ELTVEFTVLGR+ Sbjct: 1 MSNLVTCLWFDHGEASKAAEFYAATFPDSHVGRVNMAPGDFPGGQEGTELTVEFTVLGRQ 60 Query: 59 FVGLNGGSNYTPNEAVSFMVLTDSQEETDRYWNAVTSNGGKELPCGWCRDRWGFAWQITP 118 FVGLNGG +TPNE+VSFMV+T++QEETDRYWNA+ NGG E CGWC+DRWG++WQITP Sbjct: 61 FVGLNGGPVFTPNESVSFMVVTENQEETDRYWNAIIENGGAESACGWCKDRWGYSWQITP 120 Query: 119 RRLLELVNNADRAAGKRAMEAMMTMKNIDIAAIERA 154 RRLL+L +++ KRA EAMMTMK IDIAA++ A Sbjct: 121 RRLLDLTTSSNPIEAKRAFEAMMTMKKIDIAALDAA 156 >ref|YP_002362511.1| 3-demethylubiquinone-9 3-methyltransferase [Methylocella silvestris BL2] gb|ACK51149.1| 3-demethylubiquinone-9 3-methyltransferase [Methylocella silvestris BL2] Length = 159 Score = 226 bits (577), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 109/159 (68%), Positives = 125/159 (78%), Gaps = 2/159 (1%) Query: 1 MTDLVTCLWFDQGKAREAAEFYAATFPDSHVGAGHQ--SPIPGIGQGEELTVEFTVLGRR 58 M+ +VTCLWFD G+AR+AAEFYAATFPDS VG HQ S P G+ELTVEFTVLG+ Sbjct: 1 MSKIVTCLWFDNGEARKAAEFYAATFPDSRVGQAHQAASDYPCGKAGDELTVEFTVLGQA 60 Query: 59 FVGLNGGSNYTPNEAVSFMVLTDSQEETDRYWNAVTSNGGKELPCGWCRDRWGFAWQITP 118 FVGLNGG ++PNEAVSF V+TD Q ETDRYWNA+T NGG+E CGWC+DRWGF+WQI P Sbjct: 61 FVGLNGGPVFSPNEAVSFQVMTDDQAETDRYWNAITKNGGRESQCGWCKDRWGFSWQIVP 120 Query: 119 RRLLELVNNADRAAGKRAMEAMMTMKNIDIAAIERAAAG 157 R L+ + ADRAA KRAM+AMMTM IDIA IE A AG Sbjct: 121 RVLVAALGEADRAAAKRAMDAMMTMGRIDIARIEAARAG 159 >ref|ZP_07029771.1| 3-demethylubiquinone-9 3-methyltransferase [Acidobacterium sp. MP5ACTX8] gb|EFI57258.1| 3-demethylubiquinone-9 3-methyltransferase [Acidobacterium sp. MP5ACTX8] Length = 161 Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 104/153 (67%), Positives = 119/153 (77%), Gaps = 2/153 (1%) Query: 4 LVTCLWFDQGKAREAAEFYAATFPDSHVGAGHQSPI--PGIGQGEELTVEFTVLGRRFVG 61 ++TCLWFD GKAREAAEFYAATFPDSHVG SP P +G+EL VEFTV GR F+G Sbjct: 5 MITCLWFDHGKAREAAEFYAATFPDSHVGKISASPTDTPSGPEGQELIVEFTVCGRNFMG 64 Query: 62 LNGGSNYTPNEAVSFMVLTDSQEETDRYWNAVTSNGGKELPCGWCRDRWGFAWQITPRRL 121 LNGG + NE+VSF++LTD Q ETDR WNA+ SNGG+E CGWC+DRWGF+WQITPR L Sbjct: 65 LNGGPRFVSNESVSFVILTDDQAETDRLWNAIVSNGGQESMCGWCKDRWGFSWQITPRAL 124 Query: 122 LELVNNADRAAGKRAMEAMMTMKNIDIAAIERA 154 L + DRAA KRAM AMMTM+ IDIAAIE A Sbjct: 125 LAATKDPDRAAAKRAMNAMMTMRKIDIAAIEAA 157 >ref|NP_968744.1| hypothetical protein Bd1884 [Bdellovibrio bacteriovorus HD100] emb|CAE79737.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100] Length = 159 Score = 219 bits (559), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 102/156 (65%), Positives = 123/156 (78%), Gaps = 2/156 (1%) Query: 1 MTDLVTCLWFDQGKAREAAEFYAATFPDSHVGAGHQSP--IPGIGQGEELTVEFTVLGRR 58 MT+LVTC+WFD G+A +AA FYA TFP+S VG + +P PG +G ELTVEFTVLGR+ Sbjct: 1 MTELVTCVWFDHGEASKAAAFYAKTFPNSEVGRVNTAPGDFPGGKKGTELTVEFTVLGRK 60 Query: 59 FVGLNGGSNYTPNEAVSFMVLTDSQEETDRYWNAVTSNGGKELPCGWCRDRWGFAWQITP 118 FVGLNGG + PNE+VSFMV+T+SQEETDRYWNA+ NGG E CGWC+DRWGF+WQITP Sbjct: 61 FVGLNGGPVFKPNESVSFMVITESQEETDRYWNAILENGGIESACGWCKDRWGFSWQITP 120 Query: 119 RRLLELVNNADRAAGKRAMEAMMTMKNIDIAAIERA 154 R LLEL ++D A +RA E+MMTM IDIA +E A Sbjct: 121 RILLELTTSSDSAKAQRAFESMMTMTKIDIATLEAA 156 >ref|NP_840356.1| hypothetical protein NE0266 [Nitrosomonas europaea ATCC 19718] emb|CAD84177.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718] Length = 159 Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 102/156 (65%), Positives = 121/156 (77%), Gaps = 2/156 (1%) Query: 1 MTDLVTCLWFDQGKAREAAEFYAATFPDSHVGAGHQSP--IPGIGQGEELTVEFTVLGRR 58 M + TCLWFD G+A +AAEFYAATFPDS V + +P PG +G ELTVEFTVLG+ Sbjct: 1 MQKIATCLWFDHGEAGKAAEFYAATFPDSRVERVNTAPGDFPGGQEGNELTVEFTVLGQS 60 Query: 59 FVGLNGGSNYTPNEAVSFMVLTDSQEETDRYWNAVTSNGGKELPCGWCRDRWGFAWQITP 118 F+GLNGG N+TP++AVSFMVLT+ QEETDRYWNA+ NGG E CGWC+DRWGF WQITP Sbjct: 61 FIGLNGGPNFTPDQAVSFMVLTNDQEETDRYWNAIIENGGSENNCGWCQDRWGFFWQITP 120 Query: 119 RRLLELVNNADRAAGKRAMEAMMTMKNIDIAAIERA 154 +RL+EL +DR KRA EAMMTM I+IAA+E A Sbjct: 121 KRLMELTTGSDRDKAKRAFEAMMTMNKINIAALEAA 156