BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0241.0050.p (200 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_02362785.1| hypothetical protein BoklC_08713 [Burkholderi... 200 7e-50 ref|ZP_02355646.1| hypothetical protein BoklE_09239 [Burkholderi... 149 3e-34 ref|ZP_02463465.1| hypothetical protein Bpse38_08841 [Burkholder... 129 2e-28 ref|YP_001817886.1| hypothetical protein Oter_0998 [Opitutus ter... 116 2e-24 ref|NP_791046.1| membrane protein [Pseudomonas syringae pv. toma... 114 7e-24 >ref|ZP_02362785.1| hypothetical protein BoklC_08713 [Burkholderia oklahomensis C6786] Length = 285 Score = 200 bits (509), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 131/197 (66%), Positives = 150/197 (76%) Query: 1 MPSGLAALVLSTSSLFAAVIARAALGVPISSGFVSGALCGILGLAIIFLPGAAAHGAAPL 60 +PSGLAALVLSTSSLFAA++ RA LG P++ + GA CGI G+ II P A Sbjct: 87 IPSGLAALVLSTSSLFAALLGRALLGTPLARSLLWGAACGIAGVGIIVGPSLGTVRAGSA 146 Query: 61 AGFAWALTAAIATGAGTTVGARNQRAGLPVVSVLGWGAFVGAAASALWAVATGTPFAADI 120 +GFAWAL AA+AT AGT VGARNQRAGLP V++LGWGA VG+A SA WA A PF AD Sbjct: 147 SGFAWALVAAVATAAGTVVGARNQRAGLPTVAILGWGALVGSATSAAWAGAQHVPFVADW 206 Query: 121 SLSYVASFLYLAIAASCITFMLYFELVRRLGPGRAAYTLALVPLVALVLSALFEHLALGW 180 S+ YV S LYLAI ASC+TFMLYF+LVRRLGPG+AAYTLA VP+VAL LSALFE L L Sbjct: 207 SVRYVGSLLYLAIGASCVTFMLYFDLVRRLGPGKAAYTLAAVPIVALGLSALFEGLHLDA 266 Query: 181 PVLAGAATILAGNVLVL 197 +L GAA +LAGNVLVL Sbjct: 267 RILVGAAAVLAGNVLVL 283 >ref|ZP_02355646.1| hypothetical protein BoklE_09239 [Burkholderia oklahomensis EO147] Length = 123 Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 88/121 (72%), Positives = 98/121 (80%) Query: 77 TTVGARNQRAGLPVVSVLGWGAFVGAAASALWAVATGTPFAADISLSYVASFLYLAIAAS 136 T VGARNQRAGLP V++LGWGA VG+A SA WA A PF AD S+ YV S LYLAI AS Sbjct: 1 TVVGARNQRAGLPTVAILGWGALVGSATSAAWAGAQHVPFVADWSVRYVGSLLYLAIGAS 60 Query: 137 CITFMLYFELVRRLGPGRAAYTLALVPLVALVLSALFEHLALGWPVLAGAATILAGNVLV 196 C+TFMLYF+LVRRLGPG+AAYTLA VP+VAL LSALFE L L +LAGAA +LAGNVLV Sbjct: 61 CVTFMLYFDLVRRLGPGKAAYTLAAVPIVALGLSALFEGLHLDARILAGAAAVLAGNVLV 120 Query: 197 L 197 L Sbjct: 121 L 121 >ref|ZP_02463465.1| hypothetical protein Bpse38_08841 [Burkholderia thailandensis MSMB43] Length = 134 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 84/116 (72%), Positives = 93/116 (80%) Query: 82 RNQRAGLPVVSVLGWGAFVGAAASALWAVATGTPFAADISLSYVASFLYLAIAASCITFM 141 RNQRAGLP V++LGWGA VG+A SA WA A PF AD S YV S LYLAI ASC+TFM Sbjct: 17 RNQRAGLPTVAILGWGALVGSATSAAWAAAQHVPFVADWSARYVGSLLYLAIGASCVTFM 76 Query: 142 LYFELVRRLGPGRAAYTLALVPLVALVLSALFEHLALGWPVLAGAATILAGNVLVL 197 LYF+LVRRLGPG+AAYTLA VP+VAL LSALFE L L +LAGAA +LAGNVLVL Sbjct: 77 LYFDLVRRLGPGKAAYTLAAVPIVALGLSALFEGLHLDARILAGAAAVLAGNVLVL 132 >ref|YP_001817886.1| hypothetical protein Oter_0998 [Opitutus terrae PB90-1] gb|ACB74286.1| protein of unknown function DUF6 transmembrane [Opitutus terrae PB90-1] Length = 307 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 80/202 (39%), Positives = 108/202 (53%), Gaps = 2/202 (0%) Query: 1 MPSGLAALVLSTSSLFAAVIARAALGVPISSGFVSGALCGILGLAIIFLP--GAAAHGAA 58 + SGL AL+ S R G P+ + A+ GI G+ ++ LP G A Sbjct: 88 ISSGLVALIFSLLVFMNIAATRVFFGTPLRPATLIAAVLGITGVVLVLLPELGHDASRGD 147 Query: 59 PLAGFAWALTAAIATGAGTTVGARNQRAGLPVVSVLGWGAFVGAAASALWAVATGTPFAA 118 + G +A+ + I+ G V ARNQR GLPV+ V +G GAA L+A+ G PF Sbjct: 148 AVLGAVFAIASTISASLGNIVSARNQRHGLPVIQVNTYGMLYGAAFVGLYALLAGRPFVF 207 Query: 119 DISLSYVASFLYLAIAASCITFMLYFELVRRLGPGRAAYTLALVPLVALVLSALFEHLAL 178 + + +YVAS YLA+ S + F Y LV R+G RA YT A +P+VA++LS LFE L Sbjct: 208 EATFAYVASLGYLALFGSVLAFGAYLTLVGRIGADRAGYTGATIPIVAVLLSTLFEGLQW 267 Query: 179 GWPVLAGAATILAGNVLVLARA 200 AG A LAGNVLVL + Sbjct: 268 HLVTFAGIALCLAGNVLVLRKK 289 >ref|NP_791046.1| membrane protein [Pseudomonas syringae pv. tomato str. DC3000] ref|ZP_03395277.1| membrane protein [Pseudomonas syringae pv. tomato T1] ref|ZP_07234709.1| membrane protein [Pseudomonas syringae pv. tomato Max13] ref|ZP_07252961.1| membrane protein [Pseudomonas syringae pv. tomato K40] ref|ZP_07258968.1| membrane protein [Pseudomonas syringae pv. tomato NCPPB 1108] gb|AAO54741.1| membrane protein [Pseudomonas syringae pv. tomato str. DC3000] gb|EEB61516.1| membrane protein [Pseudomonas syringae pv. tomato T1] Length = 300 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 78/202 (38%), Positives = 110/202 (54%), Gaps = 2/202 (0%) Query: 1 MPSGLAALVLSTSSLFAAVIARAALGVPISSGFVSGALCGILGLAIIFLPGAAAHGAAP- 59 +PSGL A+V STS+L+ A+ AR I+ ++G G+LGLA +F P + H A+ Sbjct: 87 IPSGLIAVVFSTSTLWNALNARVFFRQKIAGNVMAGGAMGLLGLACLFWPELSGHSASRE 146 Query: 60 -LAGFAWALTAAIATGAGTTVGARNQRAGLPVVSVLGWGAFVGAAASALWAVATGTPFAA 118 L G AL + AG + + Q+AGL ++ WG F GA+ ++ + +GTPF Sbjct: 147 TLIGLGLALLGTLCFSAGNMLSSLQQKAGLRPLTTNAWGMFYGASILGIYCLLSGTPFTF 206 Query: 119 DISLSYVASFLYLAIAASCITFMLYFELVRRLGPGRAAYTLALVPLVALVLSALFEHLAL 178 + + YV S YL I S I F Y LV R+GP RAAY L P+VAL +S E Sbjct: 207 EWNTRYVGSLFYLVIPGSVIAFTAYLTLVGRMGPERAAYCTVLFPIVALNISTWVEGYQW 266 Query: 179 GWPVLAGAATILAGNVLVLARA 200 + L G ++AGNVLV +A Sbjct: 267 TFAALLGLVLVMAGNVLVFRKA 288