BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0241.0049.p (269 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_534269.1| hypothetical protein RPC_4427 [Rhodopseudomonas... 335 4e-90 ref|YP_728483.1| hypothetical protein H16_B0318 [Ralstonia eutro... 133 3e-29 ref|YP_584735.1| hypothetical protein Rmet_2589 [Cupriavidus met... 132 6e-29 ref|YP_001774549.1| hypothetical protein Bcenmc03_6953 [Burkhold... 131 1e-28 ref|ZP_03572100.1| type III effector Hrp-dependent outer protein... 130 2e-28 >ref|YP_534269.1| hypothetical protein RPC_4427 [Rhodopseudomonas palustris BisB18] gb|ABD89950.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 416 Score = 335 bits (859), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 168/222 (75%), Positives = 189/222 (85%) Query: 15 WLIVADDLTGAADCAIAFGRRGRAAAVTWGEVTDASGYQLPVLAYDAASRGLSAGAAAAR 74 WLI+ADDLTGAADCAIAFGRRGRAAAVTWGE A +QLPVLAYDAASRGLSA AA R Sbjct: 5 WLILADDLTGAADCAIAFGRRGRAAAVTWGEADAAQDHQLPVLAYDAASRGLSAADAARR 64 Query: 75 HADVLARLCEGGRILFKKIDSTLRGQPAAETAAALAHLKSRSSPAFGVFAPAFPATGRTT 134 HA+VL +L RILFKKIDSTLRGQPAAETAA L++LKSR AFGVFAPAFPATGRTT Sbjct: 65 HAEVLTQLAAAERILFKKIDSTLRGQPAAETAATLSYLKSRLGGAFGVFAPAFPATGRTT 124 Query: 135 IDGRILVKGRPLEEVEVWHRDHTYPNADLADILATAGVRGEKVKLAAVRGGDLKATFARL 194 IDGRI+V G+PLE+ EVW RDH+YP ADL D+LA+AGVRGEKV LAA+RGG+L+A FA+L Sbjct: 125 IDGRIVVGGQPLEQAEVWQRDHSYPTADLVDVLASAGVRGEKVTLAAIRGGELRAVFAKL 184 Query: 195 AWEGDVVAACDAETEHDLRLIAEASLHASPATFFIGRAGRPH 236 + +GDVVA CDAET+ DL LIA+ASL ASP+TFFIG G H Sbjct: 185 SRQGDVVAVCDAETDQDLHLIADASLPASPSTFFIGSGGLAH 226 >ref|YP_728483.1| hypothetical protein H16_B0318 [Ralstonia eutropha H16] emb|CAJ95118.1| conserved hypothetical protein [Ralstonia eutropha H16] Length = 415 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 96/224 (42%), Positives = 121/224 (54%), Gaps = 9/224 (4%) Query: 13 QSWLIVADDLTGAADCAIAFGRRGRAAAVTW-GEVTDASGYQLPVLAYDAASRGLSAGAA 71 SWLI+ADDL+GAADCAI + G VT A Q V+A D SR ++ A Sbjct: 1 MSWLIIADDLSGAADCAIGYAMSGARTVVTLEAAPAGADLSQADVVACDVDSRRMAPQEA 60 Query: 72 AARHADVLARLCEGGRILFKKIDSTLRGQPAAETAAALAHLKSRSSPAFGVFAPAFPATG 131 AAR+ + R R L+KKIDSTLRG AAETAA + APAFPATG Sbjct: 61 AARNLEAWHRGQGASRRLYKKIDSTLRGNWAAETAALAPLAGLA------IVAPAFPATG 114 Query: 132 RTTIDGRILVKGRPLEEVEVWHRDHTYPNADLADILATAGVRGEKVKLAAVRGGD--LKA 189 RTT G + V G+PLE+ ++W + ADL +LA G+R + L VR GD L+ Sbjct: 115 RTTAGGCMFVNGQPLEDSDIWRLEALTGRADLVALLAARGLRATLLPLDTVRAGDATLRL 174 Query: 190 TFARLAWEGDVVAACDAETEHDLRLIAEASLHASPATFFIGRAG 233 T A LA EG CDA+TE DL +A A+ F++G G Sbjct: 175 TIAGLAREGVRAVVCDAQTEQDLAALAAATAQLDVPAFWVGSGG 218 >ref|YP_584735.1| hypothetical protein Rmet_2589 [Cupriavidus metallidurans CH34] gb|ABF09466.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 410 Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 93/225 (41%), Positives = 124/225 (55%), Gaps = 12/225 (5%) Query: 13 QSWLIVADDLTGAADCAIAFGRRGRAAAVTWGEVTDASGY-QLPVLAYDAASRGLSAGAA 71 +WLI+ADDL+GAADCAI F G A VT +V D+ G ++A D SR ++ A Sbjct: 1 MTWLIIADDLSGAADCAIGFAAHGARAVVTL-DVADSVGIADAEIVAADVDSRRMTPEDA 59 Query: 72 AARHADVLARLCEGGRILFKKIDSTLRGQPAAETAAALAHLKSRSSPAFGVFAPAFPATG 131 + D R R L+KKIDSTLRG AAET A + + APAFPATG Sbjct: 60 TTSNIDAWHRGDGRHRRLYKKIDSTLRGNWAAETVAL------QPLAGLAIIAPAFPATG 113 Query: 132 RTTIDGRILVKGRPLEEVEVWHRDHTYPNADLADILATAGVRGEKVKLAAVRGGDLKATF 191 RTT GR+ V G+PLE+ ++W + +AD+ +LA G+ + L VR G A Sbjct: 114 RTTRGGRMFVNGQPLEDTDIWRLEGLNGHADMVALLAARGLATALLPLDVVRAG-APAVL 172 Query: 192 ARL-AWEGDVVAA--CDAETEHDLRLIAEASLHASPATFFIGRAG 233 A L A + D +AA CDAETE DL +A+AS +++G G Sbjct: 173 AELRARQADGIAAVVCDAETEQDLVTLADASNQLDTPAYWVGSGG 217 >ref|YP_001774549.1| hypothetical protein Bcenmc03_6953 [Burkholderia cenocepacia MC0-3] gb|ACA96054.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3] Length = 425 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/246 (40%), Positives = 131/246 (53%), Gaps = 12/246 (4%) Query: 16 LIVADDLTGAADCAIAFGRRGRAAAVTWGEVTDASGYQ-LPVLAYDAASRGLSAGAAAAR 74 LIVADDL+GAADCA+A R G A V A+ + +L+ D SR L AA R Sbjct: 12 LIVADDLSGAADCAVAGLRHGLTATVVLDAAHAAAPPHGVDILSIDVDSRRLPKDVAARR 71 Query: 75 HADVLARLCEGGRILFKKIDSTLRGQPAAETAAALAHLKSRSSPAFGVFAPAFPATGRTT 134 D +A L G L+KK+DSTLRG AAE AA L SR+ + PA+PA+GRTT Sbjct: 72 TVDAVASLSSAGTRLYKKVDSTLRGNFAAEVAA----LTSRA--GMAIVCPAYPASGRTT 125 Query: 135 IDGRILVKGRPLEEVEVWHRDHTYPNADLADILATAGVRGEKVKLAAVRGGDLKATFARL 194 IDGR V+G P+E E W +H ADL +L+ +R + + VRG T Sbjct: 126 IDGRQWVRGVPVEASEYWRNEHIPGTADLVALLSAEDLRVAYMAIGTVRGNANALTAHLR 185 Query: 195 AWEGDVVAA--CDAETEHDLRLIAEASLHASPATFFIGRAGRPHPAARRAVRDPAKGSAG 252 + D + A CDAE++ DL+ IA AS A F++G AG P A+ P G++G Sbjct: 186 GLQSDRMQAVVCDAESDDDLQRIARAS-AALDGVFWVGSAGLA-PGVIEAL-GPPHGASG 242 Query: 253 GRVAGP 258 GP Sbjct: 243 PTAGGP 248 >ref|ZP_03572100.1| type III effector Hrp-dependent outer protein [Burkholderia multivorans CGD2M] ref|ZP_03578329.1| type III effector Hrp-dependent outer protein [Burkholderia multivorans CGD2] gb|EEE07535.1| type III effector Hrp-dependent outer protein [Burkholderia multivorans CGD2] gb|EEE13908.1| type III effector Hrp-dependent outer protein [Burkholderia multivorans CGD2M] Length = 432 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 93/226 (41%), Positives = 120/226 (53%), Gaps = 13/226 (5%) Query: 13 QSWLIVADDLTGAADCAIAFGRRGRAAAVTW---GEVTDASGYQLPVLAYDAASRGLSAG 69 S LI+ADDL+GAADCAI F G VT + DAS V+A D +R L+ Sbjct: 1 MSMLIIADDLSGAADCAIGFANAGYRTVVTLDVPAQGLDASAAD--VIAADTDTRRLTPA 58 Query: 70 AAAARHADVLARLCEGGRILFKKIDSTLRGQPAAETAAALAHLKSRSSPAFGVFAPAFPA 129 AA R + L E GR L+KKIDSTLRG AAE AA + + APAFPA Sbjct: 59 EAAQRTSAAWRALREPGRRLYKKIDSTLRGNWAAEVAAL------QPLAGLAIVAPAFPA 112 Query: 130 TGRTTIDGRILVKGRPLEEVEVWHRDHTYPNADLADILATAGVRGEKVKLAAVRGGD--L 187 TGRT + GR+ V+G PLE + W ++ ADL +LA AGV ++ + A+R L Sbjct: 113 TGRTVLGGRVFVRGEPLETTDTWQLENAGRTADLHAMLAQAGVSTAQLDVDALRESSQTL 172 Query: 188 KATFARLAWEGDVVAACDAETEHDLRLIAEASLHASPATFFIGRAG 233 A A +A G DAET+ DL +A A+ A F++G G Sbjct: 173 IARIAAVAASGTEALVVDAETKDDLIALARATAQMDDALFWVGSGG 218