BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0241.0047.p         (96 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003692502.1| mechanosensitive ion channel MscS [Starkeya ...   102   2e-20
ref|YP_001314451.1| mechanosensitive ion channel MscS [Sinorhizo...    95   3e-18
gb|AEG07830.1| MscS Mechanosensitive ion channel [Sinorhizobium ...    92   2e-17
ref|NP_437697.1| hypothetical protein SM_b20863 [Sinorhizobium m...    92   2e-17
ref|YP_004557111.1| mechanosensitive ion channel MscS [Sinorhizo...    92   2e-17

>ref|YP_003692502.1| mechanosensitive ion channel MscS [Starkeya novella DSM 506]
 gb|ADH87883.1| MscS Mechanosensitive ion channel [Starkeya novella DSM 506]
          Length = 355

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/77 (70%), Positives = 62/77 (80%)

Query: 1   MRSVLEASTRIVQDPPPIVALNSIDVAAIEVELLFRVESPAGWTAARNEVIDLLYSRCKA 60
           MRSVL+ASTRIVQDPPP VAL SID  AI+VEL FRV S A  T A+NE+IDL++   KA
Sbjct: 271 MRSVLQASTRIVQDPPPAVALKSIDAIAIDVELQFRVASLAVGTLAKNEIIDLIHGHRKA 330

Query: 61  NGLSLAAPAESLVFGPA 77
           +GLSLA PA+SLVF PA
Sbjct: 331 DGLSLALPAQSLVFVPA 347


>ref|YP_001314451.1| mechanosensitive ion channel MscS [Sinorhizobium medicae WSM419]
 gb|ABR64518.1| MscS Mechanosensitive ion channel [Sinorhizobium medicae WSM419]
          Length = 345

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 59/77 (76%)

Query: 1   MRSVLEASTRIVQDPPPIVALNSIDVAAIEVELLFRVESPAGWTAARNEVIDLLYSRCKA 60
           MRSVL++S  I+++PPP+V L +ID  AIEVEL F V+S A  T ARNE++DL++ +CK 
Sbjct: 247 MRSVLQSSVLIIKNPPPVVVLKAIDAIAIEVELQFHVDSVAVRTPARNEIVDLIHDQCKV 306

Query: 61  NGLSLAAPAESLVFGPA 77
            GLSLA PAESL F PA
Sbjct: 307 GGLSLAMPAESLAFVPA 323


>gb|AEG07830.1| MscS Mechanosensitive ion channel [Sinorhizobium meliloti BL225C]
          Length = 343

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/85 (55%), Positives = 61/85 (71%)

Query: 1   MRSVLEASTRIVQDPPPIVALNSIDVAAIEVELLFRVESPAGWTAARNEVIDLLYSRCKA 60
           MRS L++S  I + PPP+ AL +ID  AIEVEL FRV++ A  T A+NE++DLL+ RC+A
Sbjct: 247 MRSALQSSVLINKSPPPVAALKAIDAIAIEVELQFRVDNVAIRTPAKNEIVDLLHDRCEA 306

Query: 61  NGLSLAAPAESLVFGPAAISGEHSA 85
           NGLSLA PAESL F P     ++ A
Sbjct: 307 NGLSLAIPAESLAFMPPPTDSQYLA 331


>ref|NP_437697.1| hypothetical protein SM_b20863 [Sinorhizobium meliloti 1021]
 emb|CAC49557.1| putative mechanosensitive ion channel [Sinorhizobium meliloti 1021]
          Length = 343

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/85 (55%), Positives = 61/85 (71%)

Query: 1   MRSVLEASTRIVQDPPPIVALNSIDVAAIEVELLFRVESPAGWTAARNEVIDLLYSRCKA 60
           MRS L++S  I + PPP+ AL +ID  AIEVEL FRV++ A  T A+NE++DLL+ RC+A
Sbjct: 247 MRSALQSSVLINKSPPPVAALKAIDAIAIEVELQFRVDNVAIRTPAKNEIVDLLHDRCEA 306

Query: 61  NGLSLAAPAESLVFGPAAISGEHSA 85
           NGLSLA PAESL F P     ++ A
Sbjct: 307 NGLSLAIPAESLAFMPPPTDSQYLA 331


>ref|YP_004557111.1| mechanosensitive ion channel MscS [Sinorhizobium meliloti AK83]
 gb|AEG56231.1| MscS Mechanosensitive ion channel [Sinorhizobium meliloti AK83]
 gb|AEH83274.1| putative mechanosensitive ion channel [Sinorhizobium meliloti SM11]
          Length = 342

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/76 (60%), Positives = 58/76 (76%)

Query: 1   MRSVLEASTRIVQDPPPIVALNSIDVAAIEVELLFRVESPAGWTAARNEVIDLLYSRCKA 60
           MRS L++S  I + PPP+ AL +ID  AIEVEL FRV++ A  T A+NE++DLL+ RC+A
Sbjct: 247 MRSALQSSVLINKSPPPVAALKAIDAIAIEVELQFRVDNVAIRTPAKNEIVDLLHDRCEA 306

Query: 61  NGLSLAAPAESLVFGP 76
           NGLSLA PAESL F P
Sbjct: 307 NGLSLAIPAESLAFMP 322