BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0241.0040.p (899 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767564.1| DNA mismatch repair protein MutS [Bradyrhizobiu... 1517 0.0 sp|Q21CE8.2|MUTS_RHOPB RecName: Full=DNA mismatch repair protein... 1504 0.0 ref|YP_001202719.1| DNA mismatch repair protein MutS [Bradyrhizo... 1496 0.0 ref|YP_530257.1| DNA mismatch repair protein MutS [Rhodopseudomo... 1493 0.0 ref|YP_001243393.1| DNA mismatch repair protein MutS [Bradyrhizo... 1489 0.0 >ref|NP_767564.1| DNA mismatch repair protein MutS [Bradyrhizobium japonicum USDA 110] sp|Q89VX1.1|MUTS_BRAJA RecName: Full=DNA mismatch repair protein mutS dbj|BAC46189.1| DNA mismatch repair protein [Bradyrhizobium japonicum USDA 110] Length = 912 Score = 1517 bits (3928), Expect = 0.0, Method: Compositional matrix adjust. Identities = 779/912 (85%), Positives = 836/912 (91%), Gaps = 13/912 (1%) Query: 1 MTIQQPIPVPP-EATPA---EAPSRVTPMMEQYLEIKAAHPGLLLFYRMGDFYELFFEDA 56 MT+QQPIPVPP + TPA EA +RVTPMMEQYLEIKAAH GLLLFYRMGDFYELFFEDA Sbjct: 1 MTMQQPIPVPPPDETPAPQAEAAARVTPMMEQYLEIKAAHQGLLLFYRMGDFYELFFEDA 60 Query: 57 EIASKTLGIVLTKRGKHQGMDIPMCGVPVERSEDYLHRLIGAGHRVAVCEQTENPAEAKA 116 EIASKTLGIVLTKRGKHQG DIPMCGVPVER+EDYLHRLI AGHRVAVCEQTE+PA AKA Sbjct: 61 EIASKTLGIVLTKRGKHQGADIPMCGVPVERAEDYLHRLISAGHRVAVCEQTEDPAAAKA 120 Query: 117 RGNKSVVRRGVVRLVTPGTLTEDTLLDARTNNYLI-------XAGADRLGLAWIDISTSE 169 RGNKSVVRRGVVRLVTPGTLTEDTLLDAR NNYL+ G DR GLAWIDIST+E Sbjct: 121 RGNKSVVRRGVVRLVTPGTLTEDTLLDARANNYLLAIARARSSTGGDRFGLAWIDISTAE 180 Query: 170 FMVX--APAELAATLARINPNEAIVTDALYSDSELAPTLRELPSVTPLTRDVFDSATAER 227 FMV + ELAATLARINPNEAIVTDALY+D+EL TLRELP+VTPLTRDVFD ATAE+ Sbjct: 181 FMVTECSGGELAATLARINPNEAIVTDALYNDNELGQTLRELPAVTPLTRDVFDGATAEK 240 Query: 228 RLCDYFAVATMDGLSAMSPLEPTAAAAAVTYIDRTQVGKRPPMSPPARNAAGTTMAIDPA 287 RLCDYFAVATMDGL+ ++ LE TAA+AAVTY+DRTQVG+ PP+SPPAR A+G TMAIDPA Sbjct: 241 RLCDYFAVATMDGLAQLTRLEATAASAAVTYVDRTQVGRHPPLSPPAREASGATMAIDPA 300 Query: 288 TRAHLELTRTLAGERRGSLLDAIDCTVTAAGSRLLAQRLAAPLTDVAVIARRLDAVAVFV 347 TRA+LELTRTLAGERRGSLLDAIDCTVT+AGSRLLAQRLAAPLTD IARRLDAV FV Sbjct: 301 TRANLELTRTLAGERRGSLLDAIDCTVTSAGSRLLAQRLAAPLTDAPAIARRLDAVGAFV 360 Query: 348 ADTAAREDIRTVLRAAPDMSRALARLSVGRGGPRDLASLRDGILAADQALELLAQLADPP 407 AD+AAREDIR++LR APDMSRALARLSVGRGGPRDLA LRDGI+AADQ L L +L PP Sbjct: 361 ADSAAREDIRSILRGAPDMSRALARLSVGRGGPRDLAGLRDGIIAADQVLARLGELDQPP 420 Query: 408 AEISTVMAALQRPSRDLAREFSRALSEQLPLIKRDGGFVREGYETALDESRNLRDASRLV 467 EI+ VMAAL RPSR+LA EF+ AL EQLPLIKRDGGFVR+GYE ALDE+RNLRDASRLV Sbjct: 421 QEIAAVMAALTRPSRELAAEFATALDEQLPLIKRDGGFVRQGYEPALDEARNLRDASRLV 480 Query: 468 VAAMQARYAEDTGIKTLKIRHNNVLGYFVEVTAQHGDKLFAPPLNATFIHRQTLAGQVRF 527 VA+MQARYA+DTG+K LKIRHNNVLGYFVEVTAQHGDKL + PLNATFIHRQTLAGQ+RF Sbjct: 481 VASMQARYADDTGVKGLKIRHNNVLGYFVEVTAQHGDKLMSAPLNATFIHRQTLAGQIRF 540 Query: 528 TTAELGETEAKIANAGERALNLELEIFERLSAMALAAGDDLRNAAHAFAMLDVATSLAKL 587 TT+ELGE EAKIANAG+RAL LELEIFERL A AL DDLR AA FA+LDVATSLAKL Sbjct: 541 TTSELGEIEAKIANAGDRALGLELEIFERLCAKALEISDDLRAAAQGFALLDVATSLAKL 600 Query: 588 AIDDNYVRPDVDGSLGFAIEGGRHPVVEQALKRDGQPFIANACDLSPAPAQKSGQLWLIT 647 A+D+NYVRP+VD SLGFAIE GRHPVVEQALKR+G+PFIANACDLSPAPAQKSGQLWL+T Sbjct: 601 AVDENYVRPEVDSSLGFAIEAGRHPVVEQALKRNGEPFIANACDLSPAPAQKSGQLWLLT 660 Query: 648 GPNMAGKSTFLRQNALIALLAQIGSYVPASRARLGIVDRLFSRVGAADDLARGRSTFMVE 707 GPNMAGKSTFLRQNALIALLAQIGS+VPA+RAR+GI+DRLFSRVGAADDLARGRSTFMVE Sbjct: 661 GPNMAGKSTFLRQNALIALLAQIGSFVPATRARIGIIDRLFSRVGAADDLARGRSTFMVE 720 Query: 708 MVETAVILNQASERSLVILDEIGRGTATFDGLSIAWAAIEHLHESNRCRTLFATHYHELT 767 MVETA ILNQA ER+LVILDEIGRGTATFDGLSIAWAAIEHLHESNRCRTLFATHYHELT Sbjct: 721 MVETAAILNQAGERALVILDEIGRGTATFDGLSIAWAAIEHLHESNRCRTLFATHYHELT 780 Query: 768 ALSAKLPRMFNATVRVKEWQGDVVFLHEVLPGSADRSYGIQVAKLAGLPPAVITRAKSVL 827 ALSAKLPRMFNATVRVKEWQG+VVFLHEVLPGSADRSYGIQVAKLAGLPPAVITRAKSVL Sbjct: 781 ALSAKLPRMFNATVRVKEWQGNVVFLHEVLPGSADRSYGIQVAKLAGLPPAVITRAKSVL 840 Query: 828 AKLEAQDRGQTARALVDDLPLFAVPSRAAAEDAPPSDADLLVEAVKALHPDEMSPREALD 887 AKLEAQDRGQTARAL DDLPLFAVPSRAAAE APPS+A+LL++AVKALHPDEMSPREALD Sbjct: 841 AKLEAQDRGQTARALADDLPLFAVPSRAAAEAAPPSEAELLMDAVKALHPDEMSPREALD 900 Query: 888 ALYALRAKLPKH 899 ALYAL+AKLPK Sbjct: 901 ALYALKAKLPKQ 912 >sp|Q21CE8.2|MUTS_RHOPB RecName: Full=DNA mismatch repair protein mutS Length = 905 Score = 1504 bits (3895), Expect = 0.0, Method: Compositional matrix adjust. Identities = 754/907 (83%), Positives = 818/907 (90%), Gaps = 12/907 (1%) Query: 1 MTIQQPIPVPPEATPAEAPSRVTPMMEQYLEIKAAHPGLLLFYRMGDFYELFFEDAEIAS 60 M+I+ I P+ TPA ++V+PMMEQY EIKAA+PGLLLFYRMGDFYELFFEDAEIA+ Sbjct: 1 MSIEPDISPSPD-TPAPIEAKVSPMMEQYHEIKAANPGLLLFYRMGDFYELFFEDAEIAA 59 Query: 61 KTLGIVLTKRGKHQGMDIPMCGVPVERSEDYLHRLIGAGHRVAVCEQTENPAEAKARGNK 120 + LGI LTKRGKH+G DIPMCGVPVERS+DYLHRLI GHRVAVCEQTE+PA A+AR K Sbjct: 60 RALGITLTKRGKHKGQDIPMCGVPVERSDDYLHRLIALGHRVAVCEQTEDPAAARAR--K 117 Query: 121 SVVRRGVVRLVTPGTLTEDTLLDARTNNYLI-------XAGADRLGLAWIDISTSEFMVX 173 SVVRR VVRL+TPGTLTEDTLLDAR NNYL+ AGADR+GLAWIDIST+EF+V Sbjct: 118 SVVRRDVVRLITPGTLTEDTLLDARANNYLLAIARARASAGADRIGLAWIDISTAEFIVT 177 Query: 174 --APAELAATLARINPNEAIVTDALYSDSELAPTLRELPSVTPLTRDVFDSATAERRLCD 231 APAELAATLARINPNEAIVTDALYSD EL P LRELP+VTPLTRDVFDSATAERRLCD Sbjct: 178 ECAPAELAATLARINPNEAIVTDALYSDPELGPLLRELPAVTPLTRDVFDSATAERRLCD 237 Query: 232 YFAVATMDGLSAMSPLEPTAAAAAVTYIDRTQVGKRPPMSPPARNAAGTTMAIDPATRAH 291 YFAVATMDGLSAMS LE TAAAA VTYIDRTQ+GK+PP+SPP+R A G+TMAIDPATRA+ Sbjct: 238 YFAVATMDGLSAMSRLEATAAAACVTYIDRTQLGKKPPLSPPSREATGSTMAIDPATRAN 297 Query: 292 LELTRTLAGERRGSLLDAIDCTVTAAGSRLLAQRLAAPLTDVAVIARRLDAVAVFVADTA 351 LELTRTL+GERRGSLLDAIDCTVTAAGSRLLAQRLAAPLTDV IA+RLDAVA + D Sbjct: 298 LELTRTLSGERRGSLLDAIDCTVTAAGSRLLAQRLAAPLTDVEQIAQRLDAVAALLPDPG 357 Query: 352 AREDIRTVLRAAPDMSRALARLSVGRGGPRDLASLRDGILAADQALELLAQLADPPAEIS 411 RE +R LRAAPDMSRALARLSVGRGGPRDLA+LRDG+LAADQAL L L PP EI Sbjct: 358 LREALRATLRAAPDMSRALARLSVGRGGPRDLAALRDGLLAADQALAQLGALEVPPKEIQ 417 Query: 412 TVMAALQRPSRDLAREFSRALSEQLPLIKRDGGFVREGYETALDESRNLRDASRLVVAAM 471 T MAAL+RPSRDLA+EFSRAL++ LPL+KRDGGFVREGY ALDE+R LRD SRL+VAAM Sbjct: 418 TAMAALRRPSRDLAQEFSRALADDLPLMKRDGGFVREGYHDALDETRKLRDDSRLIVAAM 477 Query: 472 QARYAEDTGIKTLKIRHNNVLGYFVEVTAQHGDKLFAPPLNATFIHRQTLAGQVRFTTAE 531 QARYA+D G+K LKIRHNNVLGYFVEVTAQHGDKL APPLN TFIHRQTLAGQ RFTTAE Sbjct: 478 QARYADDCGVKGLKIRHNNVLGYFVEVTAQHGDKLMAPPLNLTFIHRQTLAGQTRFTTAE 537 Query: 532 LGETEAKIANAGERALNLELEIFERLSAMALAAGDDLRNAAHAFAMLDVATSLAKLAIDD 591 LGE EAKIANAG+RAL LELEIFERL A+ AA DDLR AAH FA LDV +LAKLA+DD Sbjct: 538 LGEIEAKIANAGDRALGLELEIFERLVALVQAATDDLRAAAHGFAALDVTLALAKLAVDD 597 Query: 592 NYVRPDVDGSLGFAIEGGRHPVVEQALKRDGQPFIANACDLSPAPAQKSGQLWLITGPNM 651 NYVRP+VDGSL FAIEGGRHPVVEQAL+RDGQPFIANACDLSP P Q+SGQ+WLITGPNM Sbjct: 598 NYVRPEVDGSLSFAIEGGRHPVVEQALRRDGQPFIANACDLSPGPGQQSGQIWLITGPNM 657 Query: 652 AGKSTFLRQNALIALLAQIGSYVPASRARLGIVDRLFSRVGAADDLARGRSTFMVEMVET 711 AGKSTFLRQNALIALLAQIGS+VPASRAR+GIVDRLFSRVGAADDLARGRSTFMVEMVET Sbjct: 658 AGKSTFLRQNALIALLAQIGSFVPASRARIGIVDRLFSRVGAADDLARGRSTFMVEMVET 717 Query: 712 AVILNQASERSLVILDEIGRGTATFDGLSIAWAAIEHLHESNRCRTLFATHYHELTALSA 771 AVILNQASER+LVILDEIGRGTATFDGLSIAWAAIEHLHESNRCR+LFATHYHELTALSA Sbjct: 718 AVILNQASERALVILDEIGRGTATFDGLSIAWAAIEHLHESNRCRSLFATHYHELTALSA 777 Query: 772 KLPRMFNATVRVKEWQGDVVFLHEVLPGSADRSYGIQVAKLAGLPPAVITRAKSVLAKLE 831 KLPR+FNATVRVKEW GDVVFLHEVLPGSADRSYGIQVAKLAGLPP+VITRAKSVLAKLE Sbjct: 778 KLPRLFNATVRVKEWHGDVVFLHEVLPGSADRSYGIQVAKLAGLPPSVITRAKSVLAKLE 837 Query: 832 AQDRGQTARALVDDLPLFAVPSRAAAEDAPPSDADLLVEAVKALHPDEMSPREALDALYA 891 AQDRGQ+ARAL +DLPLFAV +RAAAE +PPS+A+ L+EA+KALHPDE+SPREALDALYA Sbjct: 838 AQDRGQSARALAEDLPLFAVTARAAAEPSPPSEAERLIEALKALHPDELSPREALDALYA 897 Query: 892 LRAKLPK 898 L+AKL K Sbjct: 898 LKAKLGK 904 >ref|YP_001202719.1| DNA mismatch repair protein MutS [Bradyrhizobium sp. ORS 278] sp|A4YKQ0.1|MUTS_BRASO RecName: Full=DNA mismatch repair protein mutS emb|CAL74476.1| DNA mismatch repair protein MutS [Bradyrhizobium sp. ORS 278] Length = 916 Score = 1496 bits (3872), Expect = 0.0, Method: Compositional matrix adjust. Identities = 758/908 (83%), Positives = 821/908 (90%), Gaps = 11/908 (1%) Query: 1 MTIQQPI--PVPPEATPAEAPSRVTPMMEQYLEIKAAHPGLLLFYRMGDFYELFFEDAEI 58 MTIQQPI PVP EATPAEAP+++TPMMEQYL+IKAAHPGL+LFYRMGDFYELFFEDAE+ Sbjct: 7 MTIQQPISVPVPQEATPAEAPAKLTPMMEQYLDIKAAHPGLMLFYRMGDFYELFFEDAEV 66 Query: 59 ASKTLGIVLTKRGKHQGMDIPMCGVPVERSEDYLHRLIGAGHRVAVCEQTENPAEAKARG 118 ASK LGIVLTKRGKHQG DIPMCGVPVERSEDYLHRLI G RVAVCEQ E+PA A+ARG Sbjct: 67 ASKALGIVLTKRGKHQGQDIPMCGVPVERSEDYLHRLIAQGIRVAVCEQMEDPAAARARG 126 Query: 119 NKSVVRRGVVRLVTPGTLTEDTLLDARTNNYLIX-------AGADRLGLAWIDISTSEFM 171 NKSVV+RGVVR+VTPGTLTED LLDAR NNYL+ +G DRLGLAWIDISTS+F+ Sbjct: 127 NKSVVKRGVVRVVTPGTLTEDNLLDARANNYLLSIARSRGSSGGDRLGLAWIDISTSDFI 186 Query: 172 VX--APAELAATLARINPNEAIVTDALYSDSELAPTLRELPSVTPLTRDVFDSATAERRL 229 V A AEL ATLARINPNE IV+DALYSD P LREL +VTPLTRDVFD ATAERRL Sbjct: 187 VTECAFAELTATLARINPNEVIVSDALYSDEAFEPVLRELAAVTPLTRDVFDGATAERRL 246 Query: 230 CDYFAVATMDGLSAMSPLEPTAAAAAVTYIDRTQVGKRPPMSPPARNAAGTTMAIDPATR 289 CDYFAVATMDGL+ +S LE TAAAA VTY++RTQVG+RPP++PPAR A G+TMAIDPATR Sbjct: 247 CDYFAVATMDGLAVLSRLEATAAAACVTYVERTQVGQRPPLAPPAREATGSTMAIDPATR 306 Query: 290 AHLELTRTLAGERRGSLLDAIDCTVTAAGSRLLAQRLAAPLTDVAVIARRLDAVAVFVAD 349 A+LELTRTLAGERRGSLLDAIDCTVT+AGSRLLAQRLAAPLT+ A I RRLDAV FVAD Sbjct: 307 ANLELTRTLAGERRGSLLDAIDCTVTSAGSRLLAQRLAAPLTEPAQIGRRLDAVNAFVAD 366 Query: 350 TAAREDIRTVLRAAPDMSRALARLSVGRGGPRDLASLRDGILAADQALELLAQLADPPAE 409 +AAREDIR +LR APDM+RA+ARLSVGRGGPRDLA+LRDGILAADQAL L+ L PP E Sbjct: 367 SAAREDIRVILRGAPDMTRAMARLSVGRGGPRDLAALRDGILAADQALARLSVLDQPPQE 426 Query: 410 ISTVMAALQRPSRDLAREFSRALSEQLPLIKRDGGFVREGYETALDESRNLRDASRLVVA 469 I++VMAAL RP+R LA EF+RAL EQLPLIKRDGGFVR GY+ LDE+RNLRDASRLVVA Sbjct: 427 IASVMAALARPARALADEFARALDEQLPLIKRDGGFVRSGYDATLDETRNLRDASRLVVA 486 Query: 470 AMQARYAEDTGIKTLKIRHNNVLGYFVEVTAQHGDKLFAPPLNATFIHRQTLAGQVRFTT 529 +MQARYA+ TG+K LKIRHNNVLGYFVEVTAQHGDKL + PLNATFIHRQTLAGQVRFTT Sbjct: 487 SMQARYADQTGVKALKIRHNNVLGYFVEVTAQHGDKLMSAPLNATFIHRQTLAGQVRFTT 546 Query: 530 AELGETEAKIANAGERALNLELEIFERLSAMALAAGDDLRNAAHAFAMLDVATSLAKLAI 589 +ELGE EAKIANAGERALNLELEIF+RL A ALA GDDLR AAH FAMLDVAT+LAKLA+ Sbjct: 547 SELGEIEAKIANAGERALNLELEIFDRLCAQALAIGDDLRAAAHGFAMLDVATALAKLAL 606 Query: 590 DDNYVRPDVDGSLGFAIEGGRHPVVEQALKRDGQPFIANACDLSPAPAQKSGQLWLITGP 649 DDNYVRP+VDGSLGFAIEGGRHPVVEQ+LKR+GQPFIAN+CDLSP P KSGQLWL+TGP Sbjct: 607 DDNYVRPEVDGSLGFAIEGGRHPVVEQSLKREGQPFIANSCDLSPTPGHKSGQLWLLTGP 666 Query: 650 NMAGKSTFLRQNALIALLAQIGSYVPASRARLGIVDRLFSRVGAADDLARGRSTFMVEMV 709 NMAGKSTFLRQNALIALLAQIGS+VPASRAR+GIVDRLFSRVGAADDLARGRSTFMVEMV Sbjct: 667 NMAGKSTFLRQNALIALLAQIGSFVPASRARIGIVDRLFSRVGAADDLARGRSTFMVEMV 726 Query: 710 ETAVILNQASERSLVILDEIGRGTATFDGLSIAWAAIEHLHESNRCRTLFATHYHELTAL 769 ETA ILNQA ER+LVILDEIGRGTATFDGLSIAWAAIEHLHESNRCRTLFATHYHELTAL Sbjct: 727 ETAAILNQAGERALVILDEIGRGTATFDGLSIAWAAIEHLHESNRCRTLFATHYHELTAL 786 Query: 770 SAKLPRMFNATVRVKEWQGDVVFLHEVLPGSADRSYGIQVAKLAGLPPAVITRAKSVLAK 829 +AKLPR+FNATVRVKEWQGDVVFLHEVLPGSADRSYGIQVAKLAGLPPAVI+RAKSVLAK Sbjct: 787 AAKLPRLFNATVRVKEWQGDVVFLHEVLPGSADRSYGIQVAKLAGLPPAVISRAKSVLAK 846 Query: 830 LEAQDRGQTARALVDDLPLFAVPSRAAAEDAPPSDADLLVEAVKALHPDEMSPREALDAL 889 LEA DRGQ ARALVDDLPLFAVPSRAA E A + + L+ AVK LHPDEM+PREALDAL Sbjct: 847 LEAADRGQNARALVDDLPLFAVPSRAAVEPAMSKETEELIAAVKDLHPDEMTPREALDAL 906 Query: 890 YALRAKLP 897 Y L+AKLP Sbjct: 907 YRLKAKLP 914 >ref|YP_530257.1| DNA mismatch repair protein MutS [Rhodopseudomonas palustris BisB18] gb|ABD85938.1| DNA mismatch repair protein MutS [Rhodopseudomonas palustris BisB18] Length = 882 Score = 1493 bits (3866), Expect = 0.0, Method: Compositional matrix adjust. Identities = 745/883 (84%), Positives = 803/883 (90%), Gaps = 11/883 (1%) Query: 25 MMEQYLEIKAAHPGLLLFYRMGDFYELFFEDAEIASKTLGIVLTKRGKHQGMDIPMCGVP 84 MMEQY EIKAA+PGLLLFYRMGDFYELFFEDAEIA++ LGI LTKRGKH+G DIPMCGVP Sbjct: 1 MMEQYHEIKAANPGLLLFYRMGDFYELFFEDAEIAARALGITLTKRGKHKGQDIPMCGVP 60 Query: 85 VERSEDYLHRLIGAGHRVAVCEQTENPAEAKARGNKSVVRRGVVRLVTPGTLTEDTLLDA 144 VERS+DYLHRLI GHRVAVCEQTE+PA A+AR KSVVRR VVRL+TPGTLTEDTLLDA Sbjct: 61 VERSDDYLHRLIALGHRVAVCEQTEDPAAARAR--KSVVRRDVVRLITPGTLTEDTLLDA 118 Query: 145 RTNNYLI-------XAGADRLGLAWIDISTSEFMVX--APAELAATLARINPNEAIVTDA 195 R NNYL+ AGADR+GLAWIDIST+EF+V APAELAATLARINPNEAIVTDA Sbjct: 119 RANNYLLAIARARASAGADRIGLAWIDISTAEFIVTECAPAELAATLARINPNEAIVTDA 178 Query: 196 LYSDSELAPTLRELPSVTPLTRDVFDSATAERRLCDYFAVATMDGLSAMSPLEPTAAAAA 255 LYSD EL P LRELP+VTPLTRDVFDSATAERRLCDYFAVATMDGLSAMS LE TAAAA Sbjct: 179 LYSDPELGPLLRELPAVTPLTRDVFDSATAERRLCDYFAVATMDGLSAMSRLEATAAAAC 238 Query: 256 VTYIDRTQVGKRPPMSPPARNAAGTTMAIDPATRAHLELTRTLAGERRGSLLDAIDCTVT 315 VTYIDRTQ+GK+PP+SPP+R A G+TMAIDPATRA+LELTRTL+GERRGSLLDAIDCTVT Sbjct: 239 VTYIDRTQLGKKPPLSPPSREATGSTMAIDPATRANLELTRTLSGERRGSLLDAIDCTVT 298 Query: 316 AAGSRLLAQRLAAPLTDVAVIARRLDAVAVFVADTAAREDIRTVLRAAPDMSRALARLSV 375 AAGSRLLAQRLAAPLTDV IA+RLDAVA + D RE +R LRAAPDMSRALARLSV Sbjct: 299 AAGSRLLAQRLAAPLTDVEQIAQRLDAVAALLPDPGLREALRATLRAAPDMSRALARLSV 358 Query: 376 GRGGPRDLASLRDGILAADQALELLAQLADPPAEISTVMAALQRPSRDLAREFSRALSEQ 435 GRGGPRDLA+LRDG+LAADQAL L L PP EI T MAAL+RPSRDLA+EFSRAL++ Sbjct: 359 GRGGPRDLAALRDGLLAADQALAQLGALEVPPKEIQTAMAALRRPSRDLAQEFSRALADD 418 Query: 436 LPLIKRDGGFVREGYETALDESRNLRDASRLVVAAMQARYAEDTGIKTLKIRHNNVLGYF 495 LPL+KRDGGFVREGY ALDE+R LRD SRL+VAAMQARYA+D G+K LKIRHNNVLGYF Sbjct: 419 LPLMKRDGGFVREGYHDALDETRKLRDDSRLIVAAMQARYADDCGVKGLKIRHNNVLGYF 478 Query: 496 VEVTAQHGDKLFAPPLNATFIHRQTLAGQVRFTTAELGETEAKIANAGERALNLELEIFE 555 VEVTAQHGDKL APPLN TFIHRQTLAGQ RFTTAELGE EAKIANAG+RAL LELEIFE Sbjct: 479 VEVTAQHGDKLMAPPLNLTFIHRQTLAGQTRFTTAELGEIEAKIANAGDRALGLELEIFE 538 Query: 556 RLSAMALAAGDDLRNAAHAFAMLDVATSLAKLAIDDNYVRPDVDGSLGFAIEGGRHPVVE 615 RL A+ AA DDLR AAH FA LDV +LAKLA+DDNYVRP+VDGSL FAIEGGRHPVVE Sbjct: 539 RLVALVQAATDDLRAAAHGFAALDVTLALAKLAVDDNYVRPEVDGSLSFAIEGGRHPVVE 598 Query: 616 QALKRDGQPFIANACDLSPAPAQKSGQLWLITGPNMAGKSTFLRQNALIALLAQIGSYVP 675 QAL+RDGQPFIANACDLSP P Q+SGQ+WLITGPNMAGKSTFLRQNALIALLAQIGS+VP Sbjct: 599 QALRRDGQPFIANACDLSPGPGQQSGQIWLITGPNMAGKSTFLRQNALIALLAQIGSFVP 658 Query: 676 ASRARLGIVDRLFSRVGAADDLARGRSTFMVEMVETAVILNQASERSLVILDEIGRGTAT 735 ASRAR+GIVDRLFSRVGAADDLARGRSTFMVEMVETAVILNQASER+LVILDEIGRGTAT Sbjct: 659 ASRARIGIVDRLFSRVGAADDLARGRSTFMVEMVETAVILNQASERALVILDEIGRGTAT 718 Query: 736 FDGLSIAWAAIEHLHESNRCRTLFATHYHELTALSAKLPRMFNATVRVKEWQGDVVFLHE 795 FDGLSIAWAAIEHLHESNRCR+LFATHYHELTALSAKLPR+FNATVRVKEW GDVVFLHE Sbjct: 719 FDGLSIAWAAIEHLHESNRCRSLFATHYHELTALSAKLPRLFNATVRVKEWHGDVVFLHE 778 Query: 796 VLPGSADRSYGIQVAKLAGLPPAVITRAKSVLAKLEAQDRGQTARALVDDLPLFAVPSRA 855 VLPGSADRSYGIQVAKLAGLPP+VITRAKSVLAKLEAQDRGQ+ARAL +DLPLFAV +RA Sbjct: 779 VLPGSADRSYGIQVAKLAGLPPSVITRAKSVLAKLEAQDRGQSARALAEDLPLFAVTARA 838 Query: 856 AAEDAPPSDADLLVEAVKALHPDEMSPREALDALYALRAKLPK 898 AAE +PPS+A+ L+EA+KALHPDE+SPREALDALYAL+AKL K Sbjct: 839 AAEPSPPSEAERLIEALKALHPDELSPREALDALYALKAKLGK 881 >ref|YP_001243393.1| DNA mismatch repair protein MutS [Bradyrhizobium sp. BTAi1] sp|A5ETJ3.1|MUTS_BRASB RecName: Full=DNA mismatch repair protein mutS gb|ABQ39487.1| DNA mismatch repair protein MutS [Bradyrhizobium sp. BTAi1] Length = 910 Score = 1489 bits (3854), Expect = 0.0, Method: Compositional matrix adjust. Identities = 755/909 (83%), Positives = 820/909 (90%), Gaps = 11/909 (1%) Query: 1 MTIQQPI--PVPPEATPAEAPSRVTPMMEQYLEIKAAHPGLLLFYRMGDFYELFFEDAEI 58 MTIQQPI PVP E PAEAP+++TPMMEQYL+IKAAHPGL+LFYRMGDFYELFFEDAE+ Sbjct: 1 MTIQQPITAPVPQETAPAEAPAKLTPMMEQYLDIKAAHPGLMLFYRMGDFYELFFEDAEV 60 Query: 59 ASKTLGIVLTKRGKHQGMDIPMCGVPVERSEDYLHRLIGAGHRVAVCEQTENPAEAKARG 118 ASK LGIVLTKRGKHQG DIPMCGVPVERSEDYLHRLI G RVAVCEQ E+PA A+ARG Sbjct: 61 ASKALGIVLTKRGKHQGQDIPMCGVPVERSEDYLHRLIAQGIRVAVCEQMEDPAAARARG 120 Query: 119 NKSVVRRGVVRLVTPGTLTEDTLLDARTNNYLI-------XAGADRLGLAWIDISTSEFM 171 NKSVV+RGVVR+VTPGTLTED LLDAR NNYL+ +G DRLGLAWIDISTS+F+ Sbjct: 121 NKSVVKRGVVRVVTPGTLTEDNLLDARANNYLLAIARSRGSSGGDRLGLAWIDISTSDFI 180 Query: 172 VX--APAELAATLARINPNEAIVTDALYSDSELAPTLRELPSVTPLTRDVFDSATAERRL 229 V A AEL ATLARINPNE I++DALYSD P LREL +VTPLTRDVFD ATAERRL Sbjct: 181 VTECAFAELTATLARINPNEVIISDALYSDEVFEPVLRELAAVTPLTRDVFDGATAERRL 240 Query: 230 CDYFAVATMDGLSAMSPLEPTAAAAAVTYIDRTQVGKRPPMSPPARNAAGTTMAIDPATR 289 CDYFAVATMDGL+ +S LE TAAAA VTY++RTQVG+RPP++PPAR A G+TMAIDPATR Sbjct: 241 CDYFAVATMDGLAVLSRLETTAAAACVTYVERTQVGQRPPLAPPAREATGSTMAIDPATR 300 Query: 290 AHLELTRTLAGERRGSLLDAIDCTVTAAGSRLLAQRLAAPLTDVAVIARRLDAVAVFVAD 349 A+LELTRTLAGERRGSLLDAIDCTVT+AGSRLLAQRLAAPLT+ A I RRLDAV VFVAD Sbjct: 301 ANLELTRTLAGERRGSLLDAIDCTVTSAGSRLLAQRLAAPLTEPAQIGRRLDAVNVFVAD 360 Query: 350 TAAREDIRTVLRAAPDMSRALARLSVGRGGPRDLASLRDGILAADQALELLAQLADPPAE 409 +AAREDIR +LR APDM+RA+ARLSVGRGGPRDLA+LRDGILAADQAL L+ L PP E Sbjct: 361 SAAREDIRAILRGAPDMTRAMARLSVGRGGPRDLAALRDGILAADQALGRLSALDQPPQE 420 Query: 410 ISTVMAALQRPSRDLAREFSRALSEQLPLIKRDGGFVREGYETALDESRNLRDASRLVVA 469 I+ MAAL RP+R LA E SRAL EQLPLIKRDGGFVR GY++ LDE+RNLRDASRLVVA Sbjct: 421 IAAAMAALARPARALAEELSRALDEQLPLIKRDGGFVRSGYDSTLDETRNLRDASRLVVA 480 Query: 470 AMQARYAEDTGIKTLKIRHNNVLGYFVEVTAQHGDKLFAPPLNATFIHRQTLAGQVRFTT 529 +MQARYA+ TG+K LKIRHNNVLGYFVEVTAQHGDKL + PLNATFIHRQTLAGQVRFTT Sbjct: 481 SMQARYADQTGVKALKIRHNNVLGYFVEVTAQHGDKLMSAPLNATFIHRQTLAGQVRFTT 540 Query: 530 AELGETEAKIANAGERALNLELEIFERLSAMALAAGDDLRNAAHAFAMLDVATSLAKLAI 589 +ELGE EAKIANAGERALNLELEIF+RL ALA GDDLR AAH FAMLDVAT+LAKLA+ Sbjct: 541 SELGEIEAKIANAGERALNLELEIFDRLCGQALAIGDDLRAAAHGFAMLDVATALAKLAV 600 Query: 590 DDNYVRPDVDGSLGFAIEGGRHPVVEQALKRDGQPFIANACDLSPAPAQKSGQLWLITGP 649 DDNY+RP+VDGSLGFAIEGGRHPVVEQALKR+GQPFIAN+CDLSP P KSGQLWL+TGP Sbjct: 601 DDNYIRPEVDGSLGFAIEGGRHPVVEQALKREGQPFIANSCDLSPTPGHKSGQLWLLTGP 660 Query: 650 NMAGKSTFLRQNALIALLAQIGSYVPASRARLGIVDRLFSRVGAADDLARGRSTFMVEMV 709 NMAGKSTFLRQNALIALLAQIGS+VPA+RAR+GIVDRLFSRVGAADDLARGRSTFMVEMV Sbjct: 661 NMAGKSTFLRQNALIALLAQIGSFVPATRARIGIVDRLFSRVGAADDLARGRSTFMVEMV 720 Query: 710 ETAVILNQASERSLVILDEIGRGTATFDGLSIAWAAIEHLHESNRCRTLFATHYHELTAL 769 ETA ILNQA ER+LVILDEIGRGTATFDGLSIAWAAIEHLHESNRCRTLFATHYHELTAL Sbjct: 721 ETAAILNQAGERALVILDEIGRGTATFDGLSIAWAAIEHLHESNRCRTLFATHYHELTAL 780 Query: 770 SAKLPRMFNATVRVKEWQGDVVFLHEVLPGSADRSYGIQVAKLAGLPPAVITRAKSVLAK 829 +AKLPR+FNATVRVKEW GDVVFLHEVLPGSADRSYGIQVAKLAGLPPAVI+RAKSVLAK Sbjct: 781 AAKLPRLFNATVRVKEWHGDVVFLHEVLPGSADRSYGIQVAKLAGLPPAVISRAKSVLAK 840 Query: 830 LEAQDRGQTARALVDDLPLFAVPSRAAAEDAPPSDADLLVEAVKALHPDEMSPREALDAL 889 LEA DRGQ ARALVDDLPLFAVPSRAA E A +A+ L+ AVKALHPDEM+PREA+DAL Sbjct: 841 LEAADRGQNARALVDDLPLFAVPSRAAPEPAMSKEAEELIAAVKALHPDEMTPREAMDAL 900 Query: 890 YALRAKLPK 898 YAL+AKLPK Sbjct: 901 YALKAKLPK 909