BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0241.0035.p (324 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001243398.1| putative sulfonate ABC transporter periplasm... 573 e-161 ref|NP_947966.1| putative sulfonate transport system substrate-b... 562 e-158 ref|YP_001991878.1| aliphatic sulfonates family ABC transporter ... 561 e-158 ref|YP_001202713.1| putative sulfonate ABC transporter periplasm... 560 e-157 ref|NP_767557.1| ABC transporter substrate-binding protein [Brad... 557 e-157 >ref|YP_001243398.1| putative sulfonate ABC transporter periplasmic binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ39492.1| putative sulfonate ABC transporter, periplasmic binding protein [Bradyrhizobium sp. BTAi1] Length = 324 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 284/324 (87%), Positives = 303/324 (93%) Query: 1 MQKFSRRTFAALLAVSTLLPGAARAADALKEIRIDWATYNPVSMVLKQKGLLEKEFAKDG 60 M SRR FA L AV L GAARAA+ +KEIRIDWATYNPVS+VLKQKGLLEKEFAKDG Sbjct: 1 MGGLSRRGFAGLAAVFLLGCGAARAAEPVKEIRIDWATYNPVSLVLKQKGLLEKEFAKDG 60 Query: 61 INIVWVQSAGSNKALEFLNAGSIDLGSTAGSAALVAKINGNPIKSIYVYSRPEWTALVTT 120 I+IVWVQSAGSNKALEFLNAGS+D GSTAGSAALVAKINGNPIKSIYVYSRPEWTALVT Sbjct: 61 ISIVWVQSAGSNKALEFLNAGSLDFGSTAGSAALVAKINGNPIKSIYVYSRPEWTALVTG 120 Query: 121 RDSRIASVADLKGKRVAVTRGTDPHIFLVRALLGAGLTEKDITPVLLQHADGKTALIRGD 180 +DS+IASVADLKGKRVAVTRGTDPHIFLVRALL AGLT+KDITPVLLQHADGK ALIRGD Sbjct: 121 KDSKIASVADLKGKRVAVTRGTDPHIFLVRALLAAGLTDKDITPVLLQHADGKAALIRGD 180 Query: 181 VDAWAGLDPMMAQAEVEDGAKLFYRKAEANTWGILNVREEFLKAHPDIVRRVLATYEEAR 240 VDAWAGLDPMMAQAEVE+GAKLFYRKA+ANTWGILNVRE+FLK +PDIVRRVLATYE AR Sbjct: 181 VDAWAGLDPMMAQAEVEEGAKLFYRKADANTWGILNVREQFLKDNPDIVRRVLATYEVAR 240 Query: 241 KYSLANYDELKKTFIAVTKLPDAVVDKQLKERTELTHSRIGSAQRESILAAGLALQQAGV 300 K +LANYD+LKKTF+AVTKLPD+VVDKQLKERTELTHSRIG+ QRESILAAGLALQQAGV Sbjct: 241 KDALANYDDLKKTFVAVTKLPDSVVDKQLKERTELTHSRIGAPQRESILAAGLALQQAGV 300 Query: 301 IDAKTDVKAALDSLIDDQVPLPTN 324 +DAK DVKA LD+LIDDQVPLPTN Sbjct: 301 VDAKVDVKATLDALIDDQVPLPTN 324 >ref|NP_947966.1| putative sulfonate transport system substrate-binding protein [Rhodopseudomonas palustris CGA009] emb|CAE28065.1| putative sulfonate transport system substrate-binding protein [Rhodopseudomonas palustris CGA009] Length = 324 Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust. Identities = 275/324 (84%), Positives = 293/324 (90%) Query: 1 MQKFSRRTFAALLAVSTLLPGAARAADALKEIRIDWATYNPVSMVLKQKGLLEKEFAKDG 60 M SRR +L+ + L P A AAD KEIRIDWATYNPVS+VLKQ+GLLEKEFAKDG Sbjct: 1 MTTLSRRLMTSLVLATMLAPTAVIAADKPKEIRIDWATYNPVSIVLKQQGLLEKEFAKDG 60 Query: 61 INIVWVQSAGSNKALEFLNAGSIDLGSTAGSAALVAKINGNPIKSIYVYSRPEWTALVTT 120 I IVWVQSAGSNKALEFLNAGSID GSTAGSAALVAKINGNPIKSIYVYSRPEWTALVTT Sbjct: 61 IGIVWVQSAGSNKALEFLNAGSIDFGSTAGSAALVAKINGNPIKSIYVYSRPEWTALVTT 120 Query: 121 RDSRIASVADLKGKRVAVTRGTDPHIFLVRALLGAGLTEKDITPVLLQHADGKTALIRGD 180 +DS+IASVADLKGKRVAVTRGTDPHIFLVRALLGAGL++ DITPVLLQHADGK ALIRGD Sbjct: 121 KDSKIASVADLKGKRVAVTRGTDPHIFLVRALLGAGLSQNDITPVLLQHADGKAALIRGD 180 Query: 181 VDAWAGLDPMMAQAEVEDGAKLFYRKAEANTWGILNVREEFLKAHPDIVRRVLATYEEAR 240 VDAWAGLDPMMAQAEVE+GAKLFYRK EANTWGILNVRE+FLK HPD+VRRVLA YE+AR Sbjct: 181 VDAWAGLDPMMAQAEVEEGAKLFYRKPEANTWGILNVREDFLKEHPDLVRRVLAVYEDAR 240 Query: 241 KYSLANYDELKKTFIAVTKLPDAVVDKQLKERTELTHSRIGSAQRESILAAGLALQQAGV 300 KYSL +YDELK+ FI VTKLPDAVVDKQLKERTELTHSRIG+ QR+SILAAGLALQQAGV Sbjct: 241 KYSLTHYDELKQAFIGVTKLPDAVVDKQLKERTELTHSRIGTPQRDSILAAGLALQQAGV 300 Query: 301 IDAKTDVKAALDSLIDDQVPLPTN 324 I DVKA LD+LIDDQVPLPTN Sbjct: 301 IQPSVDVKAVLDTLIDDQVPLPTN 324 >ref|YP_001991878.1| aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein [Rhodopseudomonas palustris TIE-1] gb|ACF01403.1| aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [Rhodopseudomonas palustris TIE-1] Length = 324 Score = 561 bits (1445), Expect = e-158, Method: Compositional matrix adjust. Identities = 274/324 (84%), Positives = 293/324 (90%) Query: 1 MQKFSRRTFAALLAVSTLLPGAARAADALKEIRIDWATYNPVSMVLKQKGLLEKEFAKDG 60 M SRR +L+ + L P A AAD KEIRIDWATYNPVS+VLKQ+GLLEKEFAKDG Sbjct: 1 MTTLSRRLMTSLVLATMLAPTAVIAADKPKEIRIDWATYNPVSIVLKQQGLLEKEFAKDG 60 Query: 61 INIVWVQSAGSNKALEFLNAGSIDLGSTAGSAALVAKINGNPIKSIYVYSRPEWTALVTT 120 I IVWVQSAGSNKALEFLNAGSID GSTAGSAALVAKINGNPIKSIYVYSRPEWTALVTT Sbjct: 61 IGIVWVQSAGSNKALEFLNAGSIDFGSTAGSAALVAKINGNPIKSIYVYSRPEWTALVTT 120 Query: 121 RDSRIASVADLKGKRVAVTRGTDPHIFLVRALLGAGLTEKDITPVLLQHADGKTALIRGD 180 +DS+IASVADLKGKRVAVTRGTDPHIFLVRALLGAGL++ DITPVLLQHADGK ALIRGD Sbjct: 121 KDSKIASVADLKGKRVAVTRGTDPHIFLVRALLGAGLSQNDITPVLLQHADGKAALIRGD 180 Query: 181 VDAWAGLDPMMAQAEVEDGAKLFYRKAEANTWGILNVREEFLKAHPDIVRRVLATYEEAR 240 VDAWAGLDPMMAQAEVE+GAKLFYRK EANTWGILNVRE+FLK HPD+VRRVLA YE+AR Sbjct: 181 VDAWAGLDPMMAQAEVEEGAKLFYRKPEANTWGILNVREDFLKEHPDLVRRVLAVYEDAR 240 Query: 241 KYSLANYDELKKTFIAVTKLPDAVVDKQLKERTELTHSRIGSAQRESILAAGLALQQAGV 300 KYSL +YDELK+ FI VTKLP+AVVDKQLKERTELTHSRIG+ QR+SILAAGLALQQAGV Sbjct: 241 KYSLTHYDELKQAFIGVTKLPEAVVDKQLKERTELTHSRIGTPQRDSILAAGLALQQAGV 300 Query: 301 IDAKTDVKAALDSLIDDQVPLPTN 324 I DVKA LD+LIDDQVPLPTN Sbjct: 301 IQPSVDVKAVLDTLIDDQVPLPTN 324 >ref|YP_001202713.1| putative sulfonate ABC transporter periplasmic binding protein [Bradyrhizobium sp. ORS 278] emb|CAL74470.1| putative sulfonate ABC transporter, periplasmic binding protein (ssuA/ycbO-like) [Bradyrhizobium sp. ORS 278] Length = 324 Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust. Identities = 276/324 (85%), Positives = 299/324 (92%) Query: 1 MQKFSRRTFAALLAVSTLLPGAARAADALKEIRIDWATYNPVSMVLKQKGLLEKEFAKDG 60 M SRR A L AV L GAA AA+ +KEIRIDWATYNPVS+VLKQKGLLEKEFAKDG Sbjct: 1 MGGLSRRALAGLAAVVLLGCGAATAAEPVKEIRIDWATYNPVSLVLKQKGLLEKEFAKDG 60 Query: 61 INIVWVQSAGSNKALEFLNAGSIDLGSTAGSAALVAKINGNPIKSIYVYSRPEWTALVTT 120 I+I WVQSAGSNKALEFLNAGS+D GSTAGSAALVA+INGNPIKSIYVYSRPEWTALVT Sbjct: 61 ISITWVQSAGSNKALEFLNAGSLDFGSTAGSAALVARINGNPIKSIYVYSRPEWTALVTG 120 Query: 121 RDSRIASVADLKGKRVAVTRGTDPHIFLVRALLGAGLTEKDITPVLLQHADGKTALIRGD 180 +DS+I SVADLKGKRVAVTRGTDPHIFLVRALLGAGLT+KDITPVLLQHADGK ALIRGD Sbjct: 121 KDSKIVSVADLKGKRVAVTRGTDPHIFLVRALLGAGLTDKDITPVLLQHADGKAALIRGD 180 Query: 181 VDAWAGLDPMMAQAEVEDGAKLFYRKAEANTWGILNVREEFLKAHPDIVRRVLATYEEAR 240 VDAWAGLDPMMAQAEVE+GAKLFYRKA+ANTWG+LNVRE+FLK +P+IVRRVLATYE AR Sbjct: 181 VDAWAGLDPMMAQAEVEEGAKLFYRKADANTWGVLNVREQFLKDNPEIVRRVLATYEVAR 240 Query: 241 KYSLANYDELKKTFIAVTKLPDAVVDKQLKERTELTHSRIGSAQRESILAAGLALQQAGV 300 K +LANYD+LKKTFIAVTKLP+ VVDKQLKERT+LTHSRIG+ QR+SILAAGLALQQAGV Sbjct: 241 KDALANYDDLKKTFIAVTKLPETVVDKQLKERTDLTHSRIGAPQRDSILAAGLALQQAGV 300 Query: 301 IDAKTDVKAALDSLIDDQVPLPTN 324 +DAK DVKA LD+LIDDQVPLPTN Sbjct: 301 VDAKVDVKATLDALIDDQVPLPTN 324 >ref|NP_767557.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC46182.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 374 Score = 557 bits (1435), Expect = e-157, Method: Compositional matrix adjust. Identities = 286/367 (77%), Positives = 300/367 (81%), Gaps = 44/367 (11%) Query: 1 MQKFSRRTFAALLAVSTLLPGAARAADALKEIRIDWATYNPVSMVLKQKGLLEKEFAKDG 60 M K +RR + P AARAAD LKEIRIDWATYNPVS+VLKQKGLLEKEFAKDG Sbjct: 9 MTKVTRRILLVGAMALAMTP-AARAADPLKEIRIDWATYNPVSLVLKQKGLLEKEFAKDG 67 Query: 61 INIVWVQSAGSNKALEFLNAGSIDLGSTAGSAALV------------------------- 95 I I WVQSAGSNKALEFLNAGSID GSTAGSAALV Sbjct: 68 ITITWVQSAGSNKALEFLNAGSIDFGSTAGSAALVEKEFAKDGITITWVQSAGSNKALEF 127 Query: 96 ------------------AKINGNPIKSIYVYSRPEWTALVTTRDSRIASVADLKGKRVA 137 AKINGNPIKSIYVYSRPEWTALVT ++SRIASVADLKGKRVA Sbjct: 128 LNAGSIDFGSTAGSAALVAKINGNPIKSIYVYSRPEWTALVTGKESRIASVADLKGKRVA 187 Query: 138 VTRGTDPHIFLVRALLGAGLTEKDITPVLLQHADGKTALIRGDVDAWAGLDPMMAQAEVE 197 VTRGTDPHIFLVRALLGAGLTEKDITPVLLQHADGKTALIRGDVDAWAGLDPMMAQAEVE Sbjct: 188 VTRGTDPHIFLVRALLGAGLTEKDITPVLLQHADGKTALIRGDVDAWAGLDPMMAQAEVE 247 Query: 198 DGAKLFYRKAEANTWGILNVREEFLKAHPDIVRRVLATYEEARKYSLANYDELKKTFIAV 257 +GAKLFYRKA+ANTWGILNVRE+FLK +PD+ RRVLATYEEARKYSLANYDELKKTFIAV Sbjct: 248 EGAKLFYRKADANTWGILNVREQFLKDYPDVARRVLATYEEARKYSLANYDELKKTFIAV 307 Query: 258 TKLPDAVVDKQLKERTELTHSRIGSAQRESILAAGLALQQAGVIDAKTDVKAALDSLIDD 317 TKLP+AVVDKQLKERTELTHSRIGS QRESILAAGLALQQAGV+DAK DVKA LD+LIDD Sbjct: 308 TKLPEAVVDKQLKERTELTHSRIGSPQRESILAAGLALQQAGVVDAKVDVKATLDALIDD 367 Query: 318 QVPLPTN 324 Q+PLPTN Sbjct: 368 QIPLPTN 374