BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0241.0013.p (280 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_530252.1| ABC transporter-like protein [Rhodopseudomonas ... 438 e-121 ref|NP_767546.1| nodulation ATP-binding protein I [Bradyrhizobiu... 428 e-118 ref|YP_779167.1| ABC transporter-like protein [Rhodopseudomonas ... 426 e-117 ref|NP_945926.1| ABC transporter ATP-binding protein [Rhodopseud... 415 e-114 ref|YP_001989611.1| ABC transporter [Rhodopseudomonas palustris ... 414 e-114 >ref|YP_530252.1| ABC transporter-like protein [Rhodopseudomonas palustris BisB18] gb|ABD85933.1| ABC transporter related [Rhodopseudomonas palustris BisB18] Length = 270 Score = 438 bits (1127), Expect = e-121, Method: Compositional matrix adjust. Identities = 217/253 (85%), Positives = 230/253 (90%) Query: 23 TPAVDQGGSAAIDVAHLVKVYKTTRAVDDISFRIARGSITGLLGGNGAGKTTTIAMIMGL 82 TPA D +AAI+VAHLVK+YK TRAVDD+SF IARGSITGLLGGNGAGKTTTIAMIMGL Sbjct: 12 TPAPDPDHAAAIEVAHLVKIYKATRAVDDVSFDIARGSITGLLGGNGAGKTTTIAMIMGL 71 Query: 83 VLPTSGSVEVLGARIPEQRYDVLGRMNFESPYVDMPMRLTVRQNLTIFGRLYAVQHLRER 142 VLPTSG+V VLG +PEQ DVLGRMNFESPYVDMPMRLTVRQNLT+FG+LYAV LRER Sbjct: 72 VLPTSGTVRVLGYAMPEQSEDVLGRMNFESPYVDMPMRLTVRQNLTVFGKLYAVPDLRER 131 Query: 143 IDQLADDLDLKEFLDRSNGKLSAGQKTRVALAKALINEPDLLLLDEPTASLDPDTADWVR 202 I QLADDLDL EFLDR NGKLSAGQKTRVALAKALIN PDLLLLDEPTASLDPDTADWVR Sbjct: 132 IAQLADDLDLNEFLDRPNGKLSAGQKTRVALAKALINRPDLLLLDEPTASLDPDTADWVR 191 Query: 203 QHLETYRKTHNATILLASHNMLEVERLCDRVIIMKRGKIEDDDSPERIMARYNRDTLEEV 262 Q LETYR+ H ATILLASHNMLEVERLCDRVIIMKRG+IEDDDSP+ IM RYNR TLEEV Sbjct: 192 QRLETYRQQHRATILLASHNMLEVERLCDRVIIMKRGRIEDDDSPDNIMQRYNRATLEEV 251 Query: 263 FLDVARGRVREGA 275 FLDVARGRV++GA Sbjct: 252 FLDVARGRVQDGA 264 >ref|NP_767546.1| nodulation ATP-binding protein I [Bradyrhizobium japonicum USDA 110] dbj|BAC46171.1| nodulation ATP-binding protein I [Bradyrhizobium japonicum USDA 110] Length = 322 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 214/277 (77%), Positives = 237/277 (85%), Gaps = 3/277 (1%) Query: 4 LSQWLNDGHMQQIGTGQAQTP--AVDQGGSAAIDVAHLVKVYKTTRAVDDISFRIARGSI 61 LS + + + G +A +P ++ SAAI V HLVKVYK TRAVDDISF + RGSI Sbjct: 45 LSAAIAEERLSMTGNDKASSPPTVAERSSSAAIAVDHLVKVYKQTRAVDDISFSLPRGSI 104 Query: 62 TGLLGGNGAGKTTTIAMIMGLVLPTSGSVEVLGARIPEQRYDVLGRMNFESPYVDMPMRL 121 TGLLGGNGAGKTTTIAMIMGLVLPTSG V+VLG ++PE+ VLGRMNFESPYVDMPMRL Sbjct: 105 TGLLGGNGAGKTTTIAMIMGLVLPTSGRVQVLGHKMPEESASVLGRMNFESPYVDMPMRL 164 Query: 122 TVRQNLTIFGRLYAVQHLRERIDQLADDLDLKEFLDRSNGKLSAGQKTRVALAKALINEP 181 TVRQNLTIFG+LYAV++L RI +LADDLDL EF+DR+NGKLSAGQKTRVALAKALIN+P Sbjct: 165 TVRQNLTIFGKLYAVKNLAGRIARLADDLDLTEFIDRANGKLSAGQKTRVALAKALINQP 224 Query: 182 DLLLLDEPTASLDPDTADWVRQHLETYRKTHNATILLASHNMLEVERLCDRVIIMKRGKI 241 +LLLLDEPTASLDPDTADWVR HLE YRK +NATILLASHNMLEVERLCDRVIIMKRG+I Sbjct: 225 ELLLLDEPTASLDPDTADWVRGHLERYRKENNATILLASHNMLEVERLCDRVIIMKRGRI 284 Query: 242 EDDDSPERIMARYNRDTLEEVFLDVARGRVREGAPEG 278 EDDD+PE IMARYNR TLEEVFLDVARGRV GA E Sbjct: 285 EDDDTPEAIMARYNRTTLEEVFLDVARGRV-NGAQEA 320 >ref|YP_779167.1| ABC transporter-like protein [Rhodopseudomonas palustris BisA53] gb|ABJ04187.1| ABC transporter related [Rhodopseudomonas palustris BisA53] Length = 268 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 210/258 (81%), Positives = 224/258 (86%) Query: 17 GTGQAQTPAVDQGGSAAIDVAHLVKVYKTTRAVDDISFRIARGSITGLLGGNGAGKTTTI 76 G + P AA++VAHLVKVYKTTRAVDD+SF IARGSITGLLGGNGAGKTTTI Sbjct: 9 GASPSTDPNAADSRVAAVEVAHLVKVYKTTRAVDDVSFSIARGSITGLLGGNGAGKTTTI 68 Query: 77 AMIMGLVLPTSGSVEVLGARIPEQRYDVLGRMNFESPYVDMPMRLTVRQNLTIFGRLYAV 136 AMIMGLVLP+SGSV VLG +PEQ VLGRMNFESPYVDMPMRLTVRQNL +FGRLYAV Sbjct: 69 AMIMGLVLPSSGSVRVLGHAMPEQSAAVLGRMNFESPYVDMPMRLTVRQNLNVFGRLYAV 128 Query: 137 QHLRERIDQLADDLDLKEFLDRSNGKLSAGQKTRVALAKALINEPDLLLLDEPTASLDPD 196 LR RID+LA DLDL FLDR NGKLSAGQKTRVALAKALIN PDLLLLDEPTASLDPD Sbjct: 129 PDLRARIDELAADLDLGAFLDRPNGKLSAGQKTRVALAKALINRPDLLLLDEPTASLDPD 188 Query: 197 TADWVRQHLETYRKTHNATILLASHNMLEVERLCDRVIIMKRGKIEDDDSPERIMARYNR 256 TADWVRQ LETYR+ HNAT+LLASHNMLEVERLCDRVIIMKRG+IEDDD+P IMARYNR Sbjct: 189 TADWVRQRLETYRRQHNATVLLASHNMLEVERLCDRVIIMKRGRIEDDDTPAGIMARYNR 248 Query: 257 DTLEEVFLDVARGRVREG 274 TLE+VFLDVARGRV+E Sbjct: 249 STLEDVFLDVARGRVQEA 266 >ref|NP_945926.1| ABC transporter ATP-binding protein [Rhodopseudomonas palustris CGA009] emb|CAE26017.1| putative ABC transporter (ATP-binding protein) [Rhodopseudomonas palustris CGA009] Length = 265 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 201/256 (78%), Positives = 225/256 (87%) Query: 19 GQAQTPAVDQGGSAAIDVAHLVKVYKTTRAVDDISFRIARGSITGLLGGNGAGKTTTIAM 78 G+A PA SAAI+V+HLVK YKTTRAVDDISFR+ RGSITGLLGGNGAGKTTTIAM Sbjct: 8 GRADDPAGSSSVSAAIEVSHLVKTYKTTRAVDDISFRVPRGSITGLLGGNGAGKTTTIAM 67 Query: 79 IMGLVLPTSGSVEVLGARIPEQRYDVLGRMNFESPYVDMPMRLTVRQNLTIFGRLYAVQH 138 IMGLVLPT+G + VLG +PEQR DVLGR+NFESPYVDMP RLTVRQNLT+FG+LYAV Sbjct: 68 IMGLVLPTAGRIRVLGCAMPEQRADVLGRINFESPYVDMPSRLTVRQNLTVFGQLYAVPD 127 Query: 139 LRERIDQLADDLDLKEFLDRSNGKLSAGQKTRVALAKALINEPDLLLLDEPTASLDPDTA 198 LR RI +LA D DL +FLDR++GKLSAGQKTRVALAKALIN+P+LLLLDEPTASLDPDTA Sbjct: 128 LRGRIAELAADFDLTDFLDRASGKLSAGQKTRVALAKALINQPELLLLDEPTASLDPDTA 187 Query: 199 DWVRQHLETYRKTHNATILLASHNMLEVERLCDRVIIMKRGKIEDDDSPERIMARYNRDT 258 DW+R HLE+YRK A+ILLASHNMLEVERLCDRV+IMKRG+IEDDD+P IMARY+R T Sbjct: 188 DWIRSHLESYRKRRGASILLASHNMLEVERLCDRVVIMKRGRIEDDDTPSAIMARYHRST 247 Query: 259 LEEVFLDVARGRVREG 274 LEEVFLDVARGR R+ Sbjct: 248 LEEVFLDVARGRARDA 263 >ref|YP_001989611.1| ABC transporter [Rhodopseudomonas palustris TIE-1] gb|ACE99135.1| ABC transporter related [Rhodopseudomonas palustris TIE-1] Length = 264 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 201/256 (78%), Positives = 225/256 (87%) Query: 19 GQAQTPAVDQGGSAAIDVAHLVKVYKTTRAVDDISFRIARGSITGLLGGNGAGKTTTIAM 78 G+A PA SAAI+V+HLVK YKTTRAVDDISFR+ RGSITGLLGGNGAGKTTTIAM Sbjct: 7 GRADDPAGSSSVSAAIEVSHLVKTYKTTRAVDDISFRVPRGSITGLLGGNGAGKTTTIAM 66 Query: 79 IMGLVLPTSGSVEVLGARIPEQRYDVLGRMNFESPYVDMPMRLTVRQNLTIFGRLYAVQH 138 IMGLVLPT+G + VLG +PEQR DVLGR+NFESPYVDMP RLTVRQNLT+FG+LYAV Sbjct: 67 IMGLVLPTAGRIRVLGCAMPEQRADVLGRINFESPYVDMPSRLTVRQNLTVFGQLYAVPD 126 Query: 139 LRERIDQLADDLDLKEFLDRSNGKLSAGQKTRVALAKALINEPDLLLLDEPTASLDPDTA 198 LR RI +LA D DL +FLDR++GKLSAGQKTRVALAKALIN+P+LLLLDEPTASLDPDTA Sbjct: 127 LRGRIAELAADFDLTDFLDRASGKLSAGQKTRVALAKALINQPELLLLDEPTASLDPDTA 186 Query: 199 DWVRQHLETYRKTHNATILLASHNMLEVERLCDRVIIMKRGKIEDDDSPERIMARYNRDT 258 DW+R HLE+YRK A+ILLASHNMLEVERLCDRV+IMKRG+IEDDD+P IMARY+R T Sbjct: 187 DWIRSHLESYRKRRGASILLASHNMLEVERLCDRVVIMKRGRIEDDDTPSAIMARYHRST 246 Query: 259 LEEVFLDVARGRVREG 274 LEEVFLDVARGR R+ Sbjct: 247 LEEVFLDVARGRARDA 262