BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0241.0007.p (561 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770015.1| dehydrogenase [Bradyrhizobium japonicum USDA 11... 858 0.0 ref|YP_001206718.1| putative oxidoreductase subunit aerobic-type... 852 0.0 ref|YP_001240739.1| putative oxidoreductase subunit [Bradyrhizob... 845 0.0 ref|ZP_01746875.1| probable dehydrogenase [Sagittula stellata E-... 612 e-173 ref|ZP_07375931.1| dehydrogenase [Ahrensia sp. R2A130] >gi|30329... 588 e-166 >ref|NP_770015.1| dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC48640.1| bll3375 [Bradyrhizobium japonicum USDA 110] Length = 528 Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/488 (89%), Positives = 455/488 (93%), Gaps = 7/488 (1%) Query: 1 MLELRKDIFADERDDNLKEIGKGTQRQDMLGHVTGTSPYFDDHKLQGMLHLKVVRSAHPH 60 MLELRKDIFADERDDNLKEIGKGTQRQDMLGHVTGTS YF+DHKLQGMLHLKVVRS H Sbjct: 1 MLELRKDIFADERDDNLKEIGKGTQRQDMLGHVTGTSSYFNDHKLQGMLHLKVVRSTEAH 60 Query: 61 ARLRRIDTSEAERSPGVRRVIRASDVPRNLNTLLSLINFGKDDEPSLAVDKVRYKGEPIV 120 AR+RRIDT+EAERS GVRR+IR +DVP NLNTLLSLINFGKDDEPSLAVDKVRYKGEPIV Sbjct: 61 ARIRRIDTTEAERSAGVRRIIRGTDVPVNLNTLLSLINFGKDDEPSLAVDKVRYKGEPIV 120 Query: 121 AIVADSPREAFEAIAKVKIDYEPLPAVFDVEEALKPGAPVVNEVYPKNTFTYHETYDHQQ 180 AIVADS REAFEAIAKVK+DYE LPAVFDVE+ALKPGAPVVNE YPKNTFTYHE YDHQ+ Sbjct: 121 AIVADSEREAFEAIAKVKVDYEVLPAVFDVEDALKPGAPVVNETYPKNTFTYHEVYDHQR 180 Query: 181 LRFGDADRALATADHVLEQRYQMSPIEHAPTETNGSIAAPDTNGRYIVYTSTQALFFSVD 240 LRFGDAD ALATADHVLEQRYQMSPIEHAPTETNG+IAAPDTNGRY+VYTSTQALFFSVD Sbjct: 181 LRFGDADAALATADHVLEQRYQMSPIEHAPTETNGAIAAPDTNGRYVVYTSTQALFFSVD 240 Query: 241 TCAKILDVPSNTFHFIGGTVGGGFGGKVDTLTEPLCILGAMLTGRPVRYLFGREEEMQYG 300 TCAKILDVPSNTFHFIGGTVGGGFGGKVDTLTEPL ILGAMLTGRPVRY+FGREEEMQYG Sbjct: 241 TCAKILDVPSNTFHFIGGTVGGGFGGKVDTLTEPLAILGAMLTGRPVRYVFGREEEMQYG 300 Query: 301 PPRGAERIYIKDGVMRDGRIVARKVRAYFDSGAYTRLSSYAAVKCAAHLPGPYTIPNVHG 360 PPRGAE IYIKDGVMRDGRIVARK+RAYFDSGAYTRLSSYAAVKCAAHLPGPYTIPNV+G Sbjct: 301 PPRGAELIYIKDGVMRDGRIVARKIRAYFDSGAYTRLSSYAAVKCAAHLPGPYTIPNVYG 360 Query: 361 DVYCVFTNRTPATAMRGFGVTAMDFAIECQMDKLAHLVGKKKXEFRILNAYRDGDMKAHR 420 DVYCVFTNRTPATAMRGFGVTAMDFAIECQMDKLA+LVG EFRILNAYRDGDMKAHR Sbjct: 361 DVYCVFTNRTPATAMRGFGVTAMDFAIECQMDKLANLVGMDPMEFRILNAYRDGDMKAHR 420 Query: 421 REAKNTALIECVQVAAEKAKWPLREDFKRMSSRKDGGGARAX-------PHARPAAPSQQ 473 REAKNTALIECVQVAAEKAKWP+R++FKR SSRKDGGG+RA H RPA +QQ Sbjct: 421 REAKNTALIECVQVAAEKAKWPIRDEFKRASSRKDGGGSRAVIPPTPTDSHPRPAVAAQQ 480 Query: 474 RTTYGRAP 481 RTTY R P Sbjct: 481 RTTYDRLP 488 >ref|YP_001206718.1| putative oxidoreductase subunit aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL [Bradyrhizobium sp. ORS 278] emb|CAL78501.1| putative oxidoreductase subunit; putative aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Bradyrhizobium sp. ORS 278] Length = 523 Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust. Identities = 413/487 (84%), Positives = 446/487 (91%), Gaps = 7/487 (1%) Query: 1 MLELRKDIFADERDDNLKEIGKGTQRQDMLGHVTGTSPYFDDHKLQGMLHLKVVRSAHPH 60 MLELRKDIFADERDDNL E+GKGTQRQDMLGHVTGTS YF+DHKLQGMLHL+VVRS PH Sbjct: 1 MLELRKDIFADERDDNLNEVGKGTQRQDMLGHVTGTSTYFNDHKLQGMLHLRVVRSTQPH 60 Query: 61 ARLRRIDTSEAERSPGVRRVIRASDVPRNLNTLLSLINFGKDDEPSLAVDKVRYKGEPIV 120 ARLRRIDTSEAERS GVRR+IR +DVPRNLNTLLSLINFGKDDEP+LAVDKVRY+GEPIV Sbjct: 61 ARLRRIDTSEAERSEGVRRIIRGADVPRNLNTLLSLINFGKDDEPTLAVDKVRYRGEPIV 120 Query: 121 AIVADSPREAFEAIAKVKIDYEPLPAVFDVEEALKPGAPVVNEVYPKNTFTYHETYDHQQ 180 A+VA++PR A EA AKV++DYE LPAVFDVEEALKPGAP VNE YPKNTFTYHE YDHQ+ Sbjct: 121 AVVAETPRLAAEAAAKVRVDYETLPAVFDVEEALKPGAPTVNETYPKNTFTYHERYDHQK 180 Query: 181 LRFGDADRALATADHVLEQRYQMSPIEHAPTETNGSIAAPDTNGRYIVYTSTQALFFSVD 240 LRFGD +R A ADHVLEQRYQMSPIEHAP ETNGSIAAPDTNGRY+VYTSTQALFFS+D Sbjct: 181 LRFGDVERGFAQADHVLEQRYQMSPIEHAPVETNGSIAAPDTNGRYVVYTSTQALFFSLD 240 Query: 241 TCAKILDVPSNTFHFIGGTVGGGFGGKVDTLTEPLCILGAMLTGRPVRYLFGREEEMQYG 300 TCAKILD+PSNTFHFIGGTVGGGFGGKVDTLTEPL IL AMLTGRPVRY+FGREEEMQ+G Sbjct: 241 TCAKILDLPSNTFHFIGGTVGGGFGGKVDTLTEPLAILAAMLTGRPVRYVFGREEEMQFG 300 Query: 301 PPRGAERIYIKDGVMRDGRIVARKVRAYFDSGAYTRLSSYAAVKCAAHLPGPYTIPNVHG 360 PPRGAERIYIKDGVMRDGRIVAR++R YFDSGAYTRLSSYA VKCAAHLPGPYTIPNVHG Sbjct: 301 PPRGAERIYIKDGVMRDGRIVARQIRGYFDSGAYTRLSSYAVVKCAAHLPGPYTIPNVHG 360 Query: 361 DVYCVFTNRTPATAMRGFGVTAMDFAIECQMDKLAHLVGKKKXEFRILNAYRDGDMKAHR 420 D+YCVFTNRTPATAMRGFG+T MDFA+ECQMDKLAHL+G EFRILNAYRDGDMKAHR Sbjct: 361 DIYCVFTNRTPATAMRGFGITGMDFALECQMDKLAHLIGMDPMEFRILNAYRDGDMKAHR 420 Query: 421 REAKNTALIECVQVAAEKAKWPLREDFKRMSSRKDGGGARAXPHARP-------AAPSQQ 473 REAKNTALIECVQVAAEKAKWP+RE+F+RMSSR+DGGGARA + P + P+QQ Sbjct: 421 REAKNTALIECVQVAAEKAKWPIREEFRRMSSRRDGGGARAAVPSTPREPAQPRSVPAQQ 480 Query: 474 RTTYGRA 480 RT+Y R Sbjct: 481 RTSYDRG 487 >ref|YP_001240739.1| putative oxidoreductase subunit [Bradyrhizobium sp. BTAi1] gb|ABQ36833.1| putative oxidoreductase subunit [Bradyrhizobium sp. BTAi1] Length = 523 Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/487 (85%), Positives = 446/487 (91%), Gaps = 7/487 (1%) Query: 1 MLELRKDIFADERDDNLKEIGKGTQRQDMLGHVTGTSPYFDDHKLQGMLHLKVVRSAHPH 60 MLELRKDIFADERDDNL E+GKGTQRQDMLGHVTGTS YF+DHKLQGMLHL+VVRSA PH Sbjct: 1 MLELRKDIFADERDDNLNEVGKGTQRQDMLGHVTGTSTYFNDHKLQGMLHLRVVRSAQPH 60 Query: 61 ARLRRIDTSEAERSPGVRRVIRASDVPRNLNTLLSLINFGKDDEPSLAVDKVRYKGEPIV 120 ARLRRIDTSEAERS GVRR+IR SDVPRNLNTLLSLINFGKDDEP+LAVDKVRY+GEPIV Sbjct: 61 ARLRRIDTSEAERSEGVRRIIRGSDVPRNLNTLLSLINFGKDDEPTLAVDKVRYRGEPIV 120 Query: 121 AIVADSPREAFEAIAKVKIDYEPLPAVFDVEEALKPGAPVVNEVYPKNTFTYHETYDHQQ 180 A+VA++PR A EA AKV+IDYE LPAVFDVEEALKPGAP VNE YPKNTF YHE YDHQ+ Sbjct: 121 AVVAETPRAAAEAAAKVRIDYEDLPAVFDVEEALKPGAPTVNETYPKNTFIYHERYDHQK 180 Query: 181 LRFGDADRALATADHVLEQRYQMSPIEHAPTETNGSIAAPDTNGRYIVYTSTQALFFSVD 240 LRFGD +R LA ADHVLEQRYQMSPIEHAP ETNGSIAAPDTNGRY+VYTSTQALFFS+D Sbjct: 181 LRFGDVERGLAQADHVLEQRYQMSPIEHAPVETNGSIAAPDTNGRYVVYTSTQALFFSLD 240 Query: 241 TCAKILDVPSNTFHFIGGTVGGGFGGKVDTLTEPLCILGAMLTGRPVRYLFGREEEMQYG 300 TCAKILD+PSNTFHFIGGTVGGGFGGKVDTLTEPL IL AMLTGRPVRY+ GREEEMQ+G Sbjct: 241 TCAKILDLPSNTFHFIGGTVGGGFGGKVDTLTEPLAILAAMLTGRPVRYVLGREEEMQFG 300 Query: 301 PPRGAERIYIKDGVMRDGRIVARKVRAYFDSGAYTRLSSYAAVKCAAHLPGPYTIPNVHG 360 PPRGAERIYIKDGVMRDGRIVAR++R YFDSGAYTRLSSYA VKCAAHLPGPYTIPNVHG Sbjct: 301 PPRGAERIYIKDGVMRDGRIVARQIRGYFDSGAYTRLSSYAVVKCAAHLPGPYTIPNVHG 360 Query: 361 DVYCVFTNRTPATAMRGFGVTAMDFAIECQMDKLAHLVGKKKXEFRILNAYRDGDMKAHR 420 D+YCVFTNRTPATAMRGFG+T +DFA+ECQMDKLAHL+G EFRILNAYRDGDMKAHR Sbjct: 361 DIYCVFTNRTPATAMRGFGITGIDFALECQMDKLAHLIGMDPMEFRILNAYRDGDMKAHR 420 Query: 421 REAKNTALIECVQVAAEKAKWPLREDFKRMSSRKDGGGARAXPHARP-------AAPSQQ 473 REAKNTALIECVQVAAEKAKWP+RE+F+RMSSRKDGGGARA + P AP+QQ Sbjct: 421 REAKNTALIECVQVAAEKAKWPMREEFRRMSSRKDGGGARAAVPSTPRETAATRPAPAQQ 480 Query: 474 RTTYGRA 480 RT+Y R Sbjct: 481 RTSYDRG 487 >ref|ZP_01746875.1| probable dehydrogenase [Sagittula stellata E-37] gb|EBA07427.1| probable dehydrogenase [Sagittula stellata E-37] Length = 564 Score = 612 bits (1579), Expect = e-173, Method: Compositional matrix adjust. Identities = 310/461 (67%), Positives = 361/461 (78%) Query: 1 MLELRKDIFADERDDNLKEIGKGTQRQDMLGHVTGTSPYFDDHKLQGMLHLKVVRSAHPH 60 M+E RKD+FADERDDNL E+GK T+RQD++GHVTG SP+FDDH+ G+LH++ RS H H Sbjct: 10 MVEFRKDLFADERDDNLNEVGKPTRRQDIVGHVTGRSPFFDDHRFDGLLHMRCARSPHHH 69 Query: 61 ARLRRIDTSEAERSPGVRRVIRASDVPRNLNTLLSLINFGKDDEPSLAVDKVRYKGEPIV 120 AR+RRIDTS AER PGV RV+ DVP NLNTLLSL++FG DDEP L+ KV Y GEP+ Sbjct: 70 ARIRRIDTSAAERMPGVVRVLTGRDVPVNLNTLLSLLDFGLDDEPILSDRKVAYMGEPVA 129 Query: 121 AIVADSPREAFEAIAKVKIDYEPLPAVFDVEEALKPGAPVVNEVYPKNTFTYHETYDHQQ 180 A++A + EA A + V++D+E LP V DVEEA+KPGAP V ++YP N F YH YDHQ+ Sbjct: 130 AVIAATEAEARAAASAVRVDWEVLPHVLDVEEAIKPGAPAVLDIYPDNKFVYHGKYDHQK 189 Query: 181 LRFGDADRALATADHVLEQRYQMSPIEHAPTETNGSIAAPDTNGRYIVYTSTQALFFSVD 240 LR+GD + AL ADHV+E RYQMSPIE AP ET G+IAAP+ N RY+ YTSTQALFFS+ Sbjct: 190 LRYGDVETALRQADHVIEGRYQMSPIEQAPIETCGAIAAPEQNDRYVCYTSTQALFFSLG 249 Query: 241 TCAKILDVPSNTFHFIGGTVGGGFGGKVDTLTEPLCILGAMLTGRPVRYLFGREEEMQYG 300 T AK+L +PS+ HFIGGTVGGGFGGKVD++ EPL ILGAM+TGRPV+Y + R EEMQ G Sbjct: 250 TAAKVLSIPSSRLHFIGGTVGGGFGGKVDSIHEPLAILGAMMTGRPVKYAWDRAEEMQVG 309 Query: 301 PPRGAERIYIKDGVMRDGRIVARKVRAYFDSGAYTRLSSYAAVKCAAHLPGPYTIPNVHG 360 PRGAER Y+ DGVM DGRIVARK YFD+GAYTRLSSYA +K HLPGPYTIPNV Sbjct: 310 APRGAERWYVTDGVMNDGRIVARKFTGYFDAGAYTRLSSYAIIKGVGHLPGPYTIPNVSA 369 Query: 361 DVYCVFTNRTPATAMRGFGVTAMDFAIECQMDKLAHLVGKKKXEFRILNAYRDGDMKAHR 420 +VYCV+TNRTPATAMRGFG+T +DFAIE MDK+A VG E RILNAYRDGDMKAHR Sbjct: 370 NVYCVYTNRTPATAMRGFGITGVDFAIEAHMDKVAEAVGMNPVELRILNAYRDGDMKAHR 429 Query: 421 REAKNTALIECVQVAAEKAKWPLREDFKRMSSRKDGGGARA 461 R AKN ALIEC QV AEKA L K SS KDGGGARA Sbjct: 430 RLAKNCALIECAQVVAEKAGITLSPQMKAASSLKDGGGARA 470 >ref|ZP_07375931.1| dehydrogenase [Ahrensia sp. R2A130] gb|EFL87825.1| dehydrogenase [Ahrensia sp. R2A130] Length = 621 Score = 588 bits (1516), Expect = e-166, Method: Compositional matrix adjust. Identities = 297/460 (64%), Positives = 356/460 (77%) Query: 2 LELRKDIFADERDDNLKEIGKGTQRQDMLGHVTGTSPYFDDHKLQGMLHLKVVRSAHPHA 61 +E RKD+FADER +NL EIG QRQD LGHVTG SPY+DD+ G+LH+++VRS+ HA Sbjct: 4 VEFRKDLFADERPENLNEIGLPKQRQDALGHVTGRSPYYDDNLYDGLLHMRMVRSSEYHA 63 Query: 62 RLRRIDTSEAERSPGVRRVIRASDVPRNLNTLLSLINFGKDDEPSLAVDKVRYKGEPIVA 121 R+R I + A+ PGV RVI+A+DVP N+NTLLSLI FG+DDE L KV Y+GE I+A Sbjct: 64 RIRSISLNGADMMPGVVRVIQAADVPHNINTLLSLIGFGRDDEALLQDKKVSYRGEAILA 123 Query: 122 IVADSPREAFEAIAKVKIDYEPLPAVFDVEEALKPGAPVVNEVYPKNTFTYHETYDHQQL 181 I+A++ +A +A V++DYE LP V DVEEALKP APVVNE YP NTF Y++ YDHQ+L Sbjct: 124 IIAETELQARKACQAVRVDYEALPHVLDVEEALKPQAPVVNEEYPNNTFDYYDRYDHQKL 183 Query: 182 RFGDADRALATADHVLEQRYQMSPIEHAPTETNGSIAAPDTNGRYIVYTSTQALFFSVDT 241 RFGD A+A ADH++E YQMSPIE AP ET G+IA P+TN R + +T +QALFFS+ T Sbjct: 184 RFGDPHAAMARADHIVEGEYQMSPIEQAPMETCGAIAVPETNDRILCHTCSQALFFSLGT 243 Query: 242 CAKILDVPSNTFHFIGGTVGGGFGGKVDTLTEPLCILGAMLTGRPVRYLFGREEEMQYGP 301 AK+LD PS+ HF GGTVGGGFGGKVD+L EP+ +LGA LTGRPV++ + REEEMQ G Sbjct: 244 TAKLLDTPSSRLHFKGGTVGGGFGGKVDSLNEPMAVLGAKLTGRPVKFTWDREEEMQVGA 303 Query: 302 PRGAERIYIKDGVMRDGRIVARKVRAYFDSGAYTRLSSYAAVKCAAHLPGPYTIPNVHGD 361 PRGAER I+DGVM DGRI+AR+ +FDSGAYTRLSSYA VK AHLPGPYTIPNV + Sbjct: 304 PRGAERWRIRDGVMNDGRIIAREFTGFFDSGAYTRLSSYAVVKGTAHLPGPYTIPNVASN 363 Query: 362 VYCVFTNRTPATAMRGFGVTAMDFAIECQMDKLAHLVGKKKXEFRILNAYRDGDMKAHRR 421 VYCVFTNRTPATAMRGFG+T +DFAIEC MDK+A V E R+LNAYRDGDMK HRR Sbjct: 364 VYCVFTNRTPATAMRGFGITGVDFAIECHMDKVAETVRMNPIELRLLNAYRDGDMKPHRR 423 Query: 422 EAKNTALIECVQVAAEKAKWPLREDFKRMSSRKDGGGARA 461 AKNTA IEC QVAA KA W + ++ MSS +DGGG RA Sbjct: 424 VAKNTAYIECCQVAAGKADWAIAPEYSAMSSLRDGGGERA 463