BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0241.0006.p (382 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001202693.1| alpha-glucosidase [Bradyrhizobium sp. ORS 27... 551 e-155 ref|YP_004111211.1| alpha amylase catalytic subunit [Rhodopseudo... 525 e-147 ref|YP_783764.1| alpha amylase catalytic subunit [Rhodopseudomon... 521 e-146 ref|YP_484432.1| alpha amylase, catalytic region [Rhodopseudomon... 520 e-145 ref|YP_001994205.1| alpha amylase catalytic subunit [Rhodopseudo... 520 e-145 >ref|YP_001202693.1| alpha-glucosidase [Bradyrhizobium sp. ORS 278] emb|CAL74450.1| Putative glycosyl hydrolase, family 13; Putative alpha-glucosidase [Bradyrhizobium sp. ORS 278] Length = 532 Score = 551 bits (1421), Expect = e-155, Method: Compositional matrix adjust. Identities = 259/335 (77%), Positives = 283/335 (84%) Query: 8 WWRRGIFYQVYPRSFQDSDGDGVGDLKGIIKRLPYLTRLGVDAVWLSPIFPSPMADFGYD 67 WWR GIFYQ+YPRSFQDSDGDGVGDL GII RLPYL LGVDA+WLSPIF SPMADFGYD Sbjct: 7 WWREGIFYQIYPRSFQDSDGDGVGDLTGIIHRLPYLMTLGVDAIWLSPIFTSPMADFGYD 66 Query: 68 ISDYTGIDPSFGTMEDFDALIAAAHDSGLKLILDLVPNHTSDQHPWFIEAKSSRDNPKRD 127 I+DYTGIDP FGTMEDFDAL+ AAHD GLKLILDLVPNHTSDQHPWF++A+ SRD+P RD Sbjct: 67 IADYTGIDPVFGTMEDFDALVKAAHDGGLKLILDLVPNHTSDQHPWFLQARQSRDDPHRD 126 Query: 128 WYIWRDPAPDGGPPNNWLSEFGGSAWAYDEASGQYYYHAFLAQQPDLNWRNREVRDAIYD 187 WYIWRDPA DGGPPNNWLSEFGGSAW +D +GQYYYHAFLAQQPDLNWRN VR AIY+ Sbjct: 127 WYIWRDPAADGGPPNNWLSEFGGSAWQFDSRTGQYYYHAFLAQQPDLNWRNPAVRAAIYN 186 Query: 188 VMRFWLRKGVDGFRVDVIWHLIKDAEFRDNPTNPHYRADRPPHEKLLTQYSTDQLEVHTV 247 VMRFWLRKGVDGFRVDVIWHLIKDA FRDNP NP Y RPPHE+++++YS DQ EVH V Sbjct: 187 VMRFWLRKGVDGFRVDVIWHLIKDAAFRDNPANPDYHGGRPPHEQIISRYSADQPEVHEV 246 Query: 248 ITEMRGVTEEFDNRVLIGEIYLPLHRLVAYYGNDLRGAQMPFNFALLSTLWSARAVEMII 307 + EMR V +EF++RVLIGEIYLPL RL+ YYG DL GA +PFNFALLS W AR +E II Sbjct: 247 VAEMRAVIDEFEDRVLIGEIYLPLERLMTYYGKDLGGAHLPFNFALLSAPWHAREIETII 306 Query: 308 ADYEKALPPGAWPNWVLGNHDXWKAARSTPPPSAR 342 ADYE ALP GAWPNWVLGNHD + A AR Sbjct: 307 ADYEAALPAGAWPNWVLGNHDRPRVASRVGEDQAR 341 >ref|YP_004111211.1| alpha amylase catalytic subunit [Rhodopseudomonas palustris DX-1] gb|ADU46478.1| alpha amylase catalytic region [Rhodopseudomonas palustris DX-1] Length = 538 Score = 525 bits (1351), Expect = e-147, Method: Compositional matrix adjust. Identities = 245/335 (73%), Positives = 277/335 (82%) Query: 8 WWRRGIFYQVYPRSFQDSDGDGVGDLKGIIKRLPYLTRLGVDAVWLSPIFPSPMADFGYD 67 WW G+ YQ+YPRSFQDS+GDG+GDL+GII RL YL+ LGVDA+WLSPIFPSPMADFGYD Sbjct: 9 WWAAGVLYQIYPRSFQDSNGDGIGDLRGIIDRLGYLSDLGVDAIWLSPIFPSPMADFGYD 68 Query: 68 ISDYTGIDPSFGTMEDFDALIAAAHDSGLKLILDLVPNHTSDQHPWFIEAKSSRDNPKRD 127 ++DY GIDP FGTM+DFDAL+ AH GLK+ILDLVPNH+SDQHPWFIE++SSRDN KRD Sbjct: 69 VADYVGIDPIFGTMDDFDALVLTAHARGLKVILDLVPNHSSDQHPWFIESRSSRDNRKRD 128 Query: 128 WYIWRDPAPDGGPPNNWLSEFGGSAWAYDEASGQYYYHAFLAQQPDLNWRNREVRDAIYD 187 WYIWRDPAPDGGPP NWLSEFGGS W YDEA+GQYYYHAFL QQPDLNWRN EVR AI + Sbjct: 129 WYIWRDPAPDGGPPTNWLSEFGGSGWEYDEATGQYYYHAFLKQQPDLNWRNPEVRAAICE 188 Query: 188 VMRFWLRKGVDGFRVDVIWHLIKDAEFRDNPTNPHYRADRPPHEKLLTQYSTDQLEVHTV 247 MRFWLRKGVDGFRVDVIWHLIKD +FRDNP NP +R PPH L+ QYS D+ E V Sbjct: 189 AMRFWLRKGVDGFRVDVIWHLIKDDQFRDNPPNPDFRPGMPPHAALIPQYSADRPETQQV 248 Query: 248 ITEMRGVTEEFDNRVLIGEIYLPLHRLVAYYGNDLRGAQMPFNFALLSTLWSARAVEMII 307 + E+R V +EFD+R+LIGEIYLP+ RLVAYYG DL GAQ+PFNFALLST W AR + +I Sbjct: 249 VAELRSVIDEFDHRLLIGEIYLPIERLVAYYGADLNGAQLPFNFALLSTPWHARDIAALI 308 Query: 308 ADYEKALPPGAWPNWVLGNHDXWKAARSTPPPSAR 342 YE+ALP GAWPNWVLGNHD + A P AR Sbjct: 309 DRYEQALPAGAWPNWVLGNHDRPRVASRVGPAQAR 343 >ref|YP_783764.1| alpha amylase catalytic subunit [Rhodopseudomonas palustris BisA53] gb|ABJ08784.1| alpha amylase, catalytic region [Rhodopseudomonas palustris BisA53] Length = 538 Score = 521 bits (1342), Expect = e-146, Method: Compositional matrix adjust. Identities = 246/338 (72%), Positives = 275/338 (81%) Query: 5 NRDWWRRGIFYQVYPRSFQDSDGDGVGDLKGIIKRLPYLTRLGVDAVWLSPIFPSPMADF 64 N WW G+ YQ+YPRSFQDSDGDGVGDL+GII+RL YL LGVDA+WLSPIFPSPMADF Sbjct: 6 NTSWWAAGVLYQIYPRSFQDSDGDGVGDLRGIIRRLGYLRDLGVDAIWLSPIFPSPMADF 65 Query: 65 GYDISDYTGIDPSFGTMEDFDALIAAAHDSGLKLILDLVPNHTSDQHPWFIEAKSSRDNP 124 GYD++DY GIDP FGTM+DFDAL+ AH GLK+ILDLVPNHTSDQHPWF+E+++SRDNP Sbjct: 66 GYDVADYVGIDPLFGTMDDFDALVLTAHARGLKIILDLVPNHTSDQHPWFVESRASRDNP 125 Query: 125 KRDWYIWRDPAPDGGPPNNWLSEFGGSAWAYDEASGQYYYHAFLAQQPDLNWRNREVRDA 184 KRDWYIWRD A DGGPPNNWLSEFGGSAW YDE +GQYYYHAFL QQPDLNWRN EVR A Sbjct: 126 KRDWYIWRDGAKDGGPPNNWLSEFGGSAWHYDEVTGQYYYHAFLKQQPDLNWRNPEVRAA 185 Query: 185 IYDVMRFWLRKGVDGFRVDVIWHLIKDAEFRDNPTNPHYRADRPPHEKLLTQYSTDQLEV 244 IY+ MRFWLRKGVDGFRVDVIWHLIKD +FRDNP NP Y+ RP HE LL YS D+ E Sbjct: 186 IYEAMRFWLRKGVDGFRVDVIWHLIKDDQFRDNPANPDYQPGRPQHESLLHVYSADRPET 245 Query: 245 HTVITEMRGVTEEFDNRVLIGEIYLPLHRLVAYYGNDLRGAQMPFNFALLSTLWSARAVE 304 V+ E+R V + FD+RVLIGEIYLPL RLVAYYG +L GA +PFNFALLS W AR++ Sbjct: 246 LAVVAELRKVIDGFDDRVLIGEIYLPLERLVAYYGENLAGAHLPFNFALLSAPWHARSLA 305 Query: 305 MIIADYEKALPPGAWPNWVLGNHDXWKAARSTPPPSAR 342 +I YE ALP GAWPNWVLGNHD + A AR Sbjct: 306 ALIDRYEAALPNGAWPNWVLGNHDRPRVASRVGEAQAR 343 >ref|YP_484432.1| alpha amylase, catalytic region [Rhodopseudomonas palustris HaA2] gb|ABD05521.1| Alpha amylase [Rhodopseudomonas palustris HaA2] Length = 540 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 240/335 (71%), Positives = 274/335 (81%) Query: 8 WWRRGIFYQVYPRSFQDSDGDGVGDLKGIIKRLPYLTRLGVDAVWLSPIFPSPMADFGYD 67 WW G YQ+YPRSFQDSD DG+GDL+GII RL +L+ LGVDA+WLSPIFPSPMADFGYD Sbjct: 11 WWAAGALYQIYPRSFQDSDSDGIGDLRGIIDRLDHLSDLGVDALWLSPIFPSPMADFGYD 70 Query: 68 ISDYTGIDPSFGTMEDFDALIAAAHDSGLKLILDLVPNHTSDQHPWFIEAKSSRDNPKRD 127 ++DY GIDP FGTM+DFDAL+ AH GLK+ILDLVPNH+SDQHPWF+E++SSRDNPKRD Sbjct: 71 VADYVGIDPIFGTMDDFDALVLTAHARGLKVILDLVPNHSSDQHPWFVESRSSRDNPKRD 130 Query: 128 WYIWRDPAPDGGPPNNWLSEFGGSAWAYDEASGQYYYHAFLAQQPDLNWRNREVRDAIYD 187 WY+WRDPAPDGGPP NWLSEFGGS W YD+A+GQYYYHAFL QQPDLNWRN +VR AIYD Sbjct: 131 WYLWRDPAPDGGPPTNWLSEFGGSGWEYDDATGQYYYHAFLKQQPDLNWRNPQVRAAIYD 190 Query: 188 VMRFWLRKGVDGFRVDVIWHLIKDAEFRDNPTNPHYRADRPPHEKLLTQYSTDQLEVHTV 247 MRFWL+KGVDGFRVDVIWHLIKD +RDNP NP +R PPH LLT YS D+ E + Sbjct: 191 AMRFWLKKGVDGFRVDVIWHLIKDDRYRDNPPNPEFRPGLPPHAALLTAYSADRPETQEI 250 Query: 248 ITEMRGVTEEFDNRVLIGEIYLPLHRLVAYYGNDLRGAQMPFNFALLSTLWSARAVEMII 307 + ++R V +EFD R+LIGEIYLP+ RLVAYYG DLRGA +PFNFALLST W A + +I Sbjct: 251 VAQLRAVCDEFDQRLLIGEIYLPIERLVAYYGADLRGAHLPFNFALLSTPWRAHDIAALI 310 Query: 308 ADYEKALPPGAWPNWVLGNHDXWKAARSTPPPSAR 342 YE ALPPGAWPNWVLGNHD + A P AR Sbjct: 311 DRYEAALPPGAWPNWVLGNHDRPRVASRVGPAQAR 345 >ref|YP_001994205.1| alpha amylase catalytic subunit [Rhodopseudomonas palustris TIE-1] gb|ACF03730.1| alpha amylase catalytic region [Rhodopseudomonas palustris TIE-1] Length = 538 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 241/335 (71%), Positives = 277/335 (82%) Query: 8 WWRRGIFYQVYPRSFQDSDGDGVGDLKGIIKRLPYLTRLGVDAVWLSPIFPSPMADFGYD 67 WW G+ YQ+YPRSFQDS+ DG+GDL+GII RL YL+ LGVDA+WLSPIFPSPMADFGYD Sbjct: 9 WWAAGVLYQIYPRSFQDSNNDGIGDLRGIIDRLGYLSDLGVDAIWLSPIFPSPMADFGYD 68 Query: 68 ISDYTGIDPSFGTMEDFDALIAAAHDSGLKLILDLVPNHTSDQHPWFIEAKSSRDNPKRD 127 ++DY GIDP FGTM+DFDAL+ AH GLK+ILDLVPNH+S+QHPWF+E++SSR NPKRD Sbjct: 69 VADYVGIDPIFGTMDDFDALVLTAHARGLKVILDLVPNHSSEQHPWFVESRSSRHNPKRD 128 Query: 128 WYIWRDPAPDGGPPNNWLSEFGGSAWAYDEASGQYYYHAFLAQQPDLNWRNREVRDAIYD 187 WYIWRDPAPDGGPP NWLSEFGGS W YD+A+GQYYYHAFL QQPDLNWRN EVR AIYD Sbjct: 129 WYIWRDPAPDGGPPTNWLSEFGGSGWEYDDATGQYYYHAFLKQQPDLNWRNPEVRAAIYD 188 Query: 188 VMRFWLRKGVDGFRVDVIWHLIKDAEFRDNPTNPHYRADRPPHEKLLTQYSTDQLEVHTV 247 MRFWLRKGVDGFRVDVIWHLIKD +FRDNP NP +R PPH L+ YS D+ E V Sbjct: 189 AMRFWLRKGVDGFRVDVIWHLIKDDQFRDNPPNPDFRPGMPPHAALIPIYSADRPETLEV 248 Query: 248 ITEMRGVTEEFDNRVLIGEIYLPLHRLVAYYGNDLRGAQMPFNFALLSTLWSARAVEMII 307 + E+R V +EFD+R+LIGEIYLP+ RLVAYYG +L+GAQ+PFNFALLST W AR + +I Sbjct: 249 VAELRRVVDEFDHRLLIGEIYLPVERLVAYYGAELKGAQLPFNFALLSTPWRAREIAALI 308 Query: 308 ADYEKALPPGAWPNWVLGNHDXWKAARSTPPPSAR 342 YE+ALP GAWPNWVLGNHD + A P AR Sbjct: 309 DRYEQALPAGAWPNWVLGNHDRPRVASRVGPAQAR 343