BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0241.0005.p (270 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_576049.1| hypothetical protein Nham_0703 [Nitrobacter ham... 302 4e-80 ref|ZP_01046005.1| hypothetical protein NB311A_11627 [Nitrobacte... 300 1e-79 ref|YP_001237474.1| hypothetical protein BBta_1331 [Bradyrhizobi... 296 2e-78 ref|YP_001208132.1| hypothetical protein BRADO6279 [Bradyrhizobi... 296 2e-78 ref|YP_782076.1| hypothetical protein RPE_3160 [Rhodopseudomonas... 292 4e-77 >ref|YP_576049.1| hypothetical protein Nham_0703 [Nitrobacter hamburgensis X14] gb|ABE61589.1| protein of unknown function DUF155 [Nitrobacter hamburgensis X14] Length = 271 Score = 302 bits (773), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 158/258 (61%), Positives = 193/258 (74%), Gaps = 1/258 (0%) Query: 11 GPRTTARAFFVADRINTSGLERGDVLATTPLAFRVNENGVAILFRYGVVVLIGLNALEED 70 G R TA A ++ DRINT G E G+VL+ PLA RV + GVA+LFRYGV VLIGL+ +E Sbjct: 12 GTRVTAHALYIGDRINTMGFE-GEVLSALPLAVRVGKAGVAVLFRYGVAVLIGLSPEDEV 70 Query: 71 EFLRSLQSRMTGLFTRREEEIAIIELAAEKEDQIPPGGPIYLQGLSPERLILVGEALAKS 130 +FL +L+ R+ G F R EEE AI+ LA+E EDQ+ GGPI L+ +S ERL+++ + LAKS Sbjct: 71 DFLETLKPRIGGEFVRFEEETAIVALASEAEDQVQAGGPIQLRDMSHERLLVIADVLAKS 130 Query: 131 VVLARHEREVRAVFDTTEPLARELAKGGRVHGGRVAILKHIGNALLVRHRVAGPVEVSEK 190 VVLA EREV VF+ EP A+ELA G R +LK +GNALLV+HRV+G V V+EK Sbjct: 131 VVLAHDEREVAKVFEIIEPFAKELADHGGTRRNRKGMLKLLGNALLVQHRVSGRVAVAEK 190 Query: 191 PDILWDKPQLERLYARLEDEYELKERAESLNRKLAVVAETAQVLTDIIDTSRSLRLELII 250 PD LWD+P LERLYARLEDEYELKER ++LNRKLAVVAETA L DIIDT RSLRLELII Sbjct: 191 PDALWDRPDLERLYARLEDEYELKERVDALNRKLAVVAETANTLADIIDTRRSLRLELII 250 Query: 251 VFLILFEVLITIYQLAMA 268 V LI E+++T YQ+ A Sbjct: 251 VVLIALEIVVTFYQIYAA 268 >ref|ZP_01046005.1| hypothetical protein NB311A_11627 [Nitrobacter sp. Nb-311A] gb|EAQ36089.1| hypothetical protein NB311A_11627 [Nitrobacter sp. Nb-311A] Length = 260 Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 157/260 (60%), Positives = 190/260 (73%), Gaps = 1/260 (0%) Query: 11 GPRTTARAFFVADRINTSGLERGDVLATTPLAFRVNENGVAILFRYGVVVLIGLNALEED 70 G R T A +V DRINT G E G+VL+T PLA R+ E VA+LFRYGV VLIGL+ EE Sbjct: 2 GTRVTVHALYVGDRINTMGFE-GEVLSTLPLAIRIGEARVAVLFRYGVAVLIGLSPEEEA 60 Query: 71 EFLRSLQSRMTGLFTRREEEIAIIELAAEKEDQIPPGGPIYLQGLSPERLILVGEALAKS 130 FL +L+ R+ G R EEE AI+ A+E EDQ+ GGPI LQ +S +RL++V + LAKS Sbjct: 61 NFLDALKPRIGGALVRLEEEAAIVTTASETEDQVQAGGPIQLQDMSSDRLLVVADVLAKS 120 Query: 131 VVLARHEREVRAVFDTTEPLARELAKGGRVHGGRVAILKHIGNALLVRHRVAGPVEVSEK 190 VVLA EREV VF+ EP A+ELA GR R +L+ +GNALLV+HRV+G V V+EK Sbjct: 121 VVLAHDEREVAKVFEIIEPFAKELADRGRTRRNRKGMLRLLGNALLVQHRVSGRVAVAEK 180 Query: 191 PDILWDKPQLERLYARLEDEYELKERAESLNRKLAVVAETAQVLTDIIDTSRSLRLELII 250 PD+LWD+P LERLYARLEDEYELKER ++LNRKLAVVAETA L DIIDT RSL LELII Sbjct: 181 PDVLWDRPDLERLYARLEDEYELKERVDALNRKLAVVAETANTLADIIDTRRSLHLELII 240 Query: 251 VFLILFEVLITIYQLAMARH 270 V LI E+++T YQ+ H Sbjct: 241 VVLIAVEIIVTFYQIYAGGH 260 >ref|YP_001237474.1| hypothetical protein BBta_1331 [Bradyrhizobium sp. BTAi1] gb|ABQ33568.1| hypothetical protein BBta_1331 [Bradyrhizobium sp. BTAi1] Length = 267 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 156/261 (59%), Positives = 192/261 (73%), Gaps = 1/261 (0%) Query: 5 LKSPIGGPRTTARAFFVADRINTSGLERGDVLATTPLAFRVNENGVAILFRYGVVVLIGL 64 + P P+ ARA +ADRINT+G E G VL+ TPLA R+ E GVA++FRYGVVV IGL Sbjct: 2 IADPHAIPQLAARALQIADRINTAGFE-GQVLSATPLAVRIGETGVAVVFRYGVVVFIGL 60 Query: 65 NALEEDEFLRSLQSRMTGLFTRREEEIAIIELAAEKEDQIPPGGPIYLQGLSPERLILVG 124 + +E FL L R+ G EEE A +++A E E+ IP GGPI ++ LS ERL++V Sbjct: 61 SVADELNFLDRLSGRLFGPIAPPEEETAKVQVAGESEEPIPVGGPILVKELSLERLLIVA 120 Query: 125 EALAKSVVLARHEREVRAVFDTTEPLARELAKGGRVHGGRVAILKHIGNALLVRHRVAGP 184 +ALAKSVVL R ERE+ VFDT EP ARELA GR RVA+LK +G ALLV+HRV+G Sbjct: 121 DALAKSVVLGRSEREIANVFDTIEPFARELAALGRTSKSRVAMLKLLGAALLVQHRVSGR 180 Query: 185 VEVSEKPDILWDKPQLERLYARLEDEYELKERAESLNRKLAVVAETAQVLTDIIDTSRSL 244 V V EKPD+LWD+P LERLYARLEDEYELKER E+LNRKLAV+AETA L DIIDT RSL Sbjct: 181 VAVGEKPDVLWDRPDLERLYARLEDEYELKEREETLNRKLAVIAETATALADIIDTKRSL 240 Query: 245 RLELIIVFLILFEVLITIYQL 265 RLE+I+V LI E+++ Y++ Sbjct: 241 RLEIIVVILIACEIVLGFYEI 261 >ref|YP_001208132.1| hypothetical protein BRADO6279 [Bradyrhizobium sp. ORS 278] emb|CAL79917.1| conserved hypothetical protein; putative coiled-coil domain [Bradyrhizobium sp. ORS 278] Length = 267 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 152/254 (59%), Positives = 191/254 (75%), Gaps = 1/254 (0%) Query: 12 PRTTARAFFVADRINTSGLERGDVLATTPLAFRVNENGVAILFRYGVVVLIGLNALEEDE 71 P+ ARA +ADRINT+G E G VL+ TPLA R+ E G+A++FRYGVVV IGL EE Sbjct: 9 PQLAARALQIADRINTAGFE-GQVLSATPLAVRIGETGIAVVFRYGVVVFIGLTVAEELN 67 Query: 72 FLRSLQSRMTGLFTRREEEIAIIELAAEKEDQIPPGGPIYLQGLSPERLILVGEALAKSV 131 FL L SR+ G T EEE A +++A E ++ IP GGPI ++ LS ERL++V +ALAKSV Sbjct: 68 FLDQLSSRLFGAITPHEEETARVQVAGESDEPIPVGGPIQVKELSLERLLIVADALAKSV 127 Query: 132 VLARHEREVRAVFDTTEPLARELAKGGRVHGGRVAILKHIGNALLVRHRVAGPVEVSEKP 191 VL R ERE+ VFDT EP ARELA GR RVA+++ +G ALLV+HRV+G V VSEKP Sbjct: 128 VLGRSEREIANVFDTIEPFARELASLGRTSRSRVAMVRLLGAALLVQHRVSGRVAVSEKP 187 Query: 192 DILWDKPQLERLYARLEDEYELKERAESLNRKLAVVAETAQVLTDIIDTSRSLRLELIIV 251 D+LWD+P LERLYARLEDEYELKER ++LNRKL V+AETA + DIIDT RSLRLE+I+V Sbjct: 188 DVLWDRPDLERLYARLEDEYELKEREDTLNRKLVVIAETATAVADIIDTKRSLRLEIIVV 247 Query: 252 FLILFEVLITIYQL 265 LI E+++ Y++ Sbjct: 248 ILIACEIVLGFYEI 261 >ref|YP_782076.1| hypothetical protein RPE_3160 [Rhodopseudomonas palustris BisA53] gb|ABJ07096.1| protein of unknown function DUF155 [Rhodopseudomonas palustris BisA53] Length = 271 Score = 292 bits (747), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 155/264 (58%), Positives = 189/264 (71%), Gaps = 2/264 (0%) Query: 2 TQTLKSPIGGPRTTARAFFVADRINTSGLERGDVLATTPLAFRVNENGVAILFRYGVVVL 61 TQT A A V DR+NT+ E + L+ PLA RV+ +GVA+LFRYGVVVL Sbjct: 3 TQTPFLKDAATHVAAHAIHVGDRVNTTAFE-AEALSAVPLAIRVS-SGVAVLFRYGVVVL 60 Query: 62 IGLNALEEDEFLRSLQSRMTGLFTRREEEIAIIELAAEKEDQIPPGGPIYLQGLSPERLI 121 IGL+ +E FL L R+ G EEE A IEL+AE EDQ+P GGPI+++ +S ERL+ Sbjct: 61 IGLSTEDEARFLERLSERIGGRLASLEEETATIELSAEGEDQVPAGGPIHIRDMSLERLL 120 Query: 122 LVGEALAKSVVLARHEREVRAVFDTTEPLARELAKGGRVHGGRVAILKHIGNALLVRHRV 181 ++ + LAKSVVLA EREV VF+ EP A+ELA GR R ++LK IGNALLV+HRV Sbjct: 121 VISDVLAKSVVLAHDEREVTQVFEVIEPFAKELATHGRTRRDRTSLLKLIGNALLVQHRV 180 Query: 182 AGPVEVSEKPDILWDKPQLERLYARLEDEYELKERAESLNRKLAVVAETAQVLTDIIDTS 241 +G V V+EKPD LWD+ LERLYARLEDEYELKER ++LNRKLAVVAETA L DIIDT Sbjct: 181 SGRVAVTEKPDALWDRSDLERLYARLEDEYELKERVDALNRKLAVVAETANTLADIIDTR 240 Query: 242 RSLRLELIIVFLILFEVLITIYQL 265 RSLRLE +IV LI FE++IT YQ+ Sbjct: 241 RSLRLEQVIVLLIAFEIIITFYQI 264