BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0241.0002.p (480 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767538.1| ATP-binding protein [Bradyrhizobium japonicum U... 691 0.0 ref|NP_946141.1| major facilitator superfamily drug efflux trans... 626 e-177 ref|YP_001989889.1| major facilitator superfamily protein [Rhodo... 625 e-177 ref|YP_004107309.1| major facilitator superfamily protein [Rhodo... 610 e-172 ref|YP_488228.1| major facilitator transporter [Rhodopseudomonas... 602 e-170 >ref|NP_767538.1| ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC46163.1| blr0898 [Bradyrhizobium japonicum USDA 110] Length = 470 Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/468 (73%), Positives = 402/468 (85%) Query: 13 MHQIVSTRADTSRRWWVLAIVVSAQFMFGVDAFIVNVAIPTIAAELHATPAQIEAVIAIY 72 MHQ V+ + D+SRRWWVL IVV+AQFMFGVDAFIVNVAIPTIA +LHATPAQIE+VIAIY Sbjct: 1 MHQTVTKQIDSSRRWWVLGIVVAAQFMFGVDAFIVNVAIPTIAVDLHATPAQIESVIAIY 60 Query: 73 LIAYATLVVTGGRLGDIHGTRNVFIAGVAGFSVTSLWCGLAQSGPELIVARLAQGATAAL 132 LIAYATLVVTGGRLGDIHGT+NVF+AGV GF++TSLWCGLAQSG ELI+ARLAQGATAAL Sbjct: 61 LIAYATLVVTGGRLGDIHGTKNVFLAGVLGFTLTSLWCGLAQSGAELIIARLAQGATAAL 120 Query: 133 MVPQVLATLHLLFSDAARARAFGIYGIVLGLAGAAGFMLGGVLVTLDLAGLGWRAVFFVN 192 MVPQVLATLHLLF+D R RAF +YGIVLGLAGAAGF+LGG+LVTLDLAG GWR+VFFVN Sbjct: 121 MVPQVLATLHLLFTDGQRNRAFAVYGIVLGLAGAAGFLLGGLLVTLDLAGTGWRSVFFVN 180 Query: 193 VPCGVVIIAAALKIMPTVPRRAGTRLDIPGAIVLFAGLLCLIGPLLFGHDLNWTGWVWLV 252 VP G+VI AA +IMP+VPRRAGT+LDI G++VLFAGLLCLIGPLLFGHD+ W W+W Sbjct: 181 VPSGLVIAGAAWRIMPSVPRRAGTKLDIKGSVVLFAGLLCLIGPLLFGHDVGWAPWLWAA 240 Query: 253 MAAGIAVIAAFVRLERSVARRGGMPLIDLSLLSDRAFMGGLVAVFFFFFANLSFYLIMTM 312 MA G ++A F++LE +V R GGMPLIDL+LL+D AF+ GL A FFFF ANLSFYL+MT+ Sbjct: 241 MAIGGVILALFLKLEHAVGRAGGMPLIDLTLLADAAFLRGLGAAFFFFVANLSFYLVMTL 300 Query: 313 FMQKGLKIPPLQAGLVFVPLALTFVIASRHSGLRARHRGTLVLIEGCALQIVGLAVLVAT 372 FMQ+GLKIPPL+AG+ F+PLA F++ASRHSG+RARHRGT VLIEGCALQI GLA L Sbjct: 301 FMQRGLKIPPLEAGMAFIPLAFAFIVASRHSGVRARHRGTKVLIEGCALQIAGLAALALV 360 Query: 373 IEAVAAPSALLLALLLMIFGYGQGLVMAPLSSAVLASVQPASAGAGSGMYGTTTQIGNAA 432 + + AP+ + LAL ++IFGYGQGLVMAPLS AVL++V+P +AG+ SGMYGT QIGNAA Sbjct: 361 VVDLDAPTPIGLALTMIIFGYGQGLVMAPLSGAVLSTVKPVAAGSASGMYGTIAQIGNAA 420 Query: 433 GVAAIGAVFFAIESTMSARLALIAACALFVLSITISAAFLSWMRRASA 480 GVAAIGA+FFA+E+ S R + + ALFV I I AAFL+WMRRASA Sbjct: 421 GVAAIGALFFALEALQSPRAGFLVSLALFVTLIMICAAFLAWMRRASA 468 >ref|NP_946141.1| major facilitator superfamily drug efflux transporter [Rhodopseudomonas palustris CGA009] emb|CAE26232.1| possible Major Facilitator Superfamily (MFS) efflux pump [Rhodopseudomonas palustris CGA009] Length = 471 Score = 626 bits (1615), Expect = e-177, Method: Compositional matrix adjust. Identities = 321/468 (68%), Positives = 382/468 (81%) Query: 13 MHQIVSTRADTSRRWWVLAIVVSAQFMFGVDAFIVNVAIPTIAAELHATPAQIEAVIAIY 72 MHQ V+ D SRRW VLAIVV+AQFMFGVDAFIVNVA+PTI+ EL A+ +Q+EAVIAIY Sbjct: 1 MHQTVAATIDNSRRWRVLAIVVAAQFMFGVDAFIVNVALPTISTELGASSSQLEAVIAIY 60 Query: 73 LIAYATLVVTGGRLGDIHGTRNVFIAGVAGFSVTSLWCGLAQSGPELIVARLAQGATAAL 132 LI YATL+VTGGRLGDI GT+ VF+ GVAGF++TSLWCGLA+SGPELI+ARLAQG TAA Sbjct: 61 LIGYATLIVTGGRLGDIFGTKTVFLLGVAGFTLTSLWCGLARSGPELILARLAQGTTAAF 120 Query: 133 MVPQVLATLHLLFSDAARARAFGIYGIVLGLAGAAGFMLGGVLVTLDLAGLGWRAVFFVN 192 MVPQVLATLH+LF DAARA+AF IYG VLGLAGA GF LGG+LVTLDL G GWR++F+VN Sbjct: 121 MVPQVLATLHVLFPDAARAKAFAIYGTVLGLAGATGFALGGLLVTLDLGGFGWRSIFYVN 180 Query: 193 VPCGVVIIAAALKIMPTVPRRAGTRLDIPGAIVLFAGLLCLIGPLLFGHDLNWTGWVWLV 252 P G++IIAAA ++MP PRR GTRLD+ GA++LFAGL+C+IGPLLFG D+ W GWVW V Sbjct: 181 GPVGLIIIAAAARVMPQTPRRPGTRLDLGGAMILFAGLVCVIGPLLFGRDVGWAGWVWAV 240 Query: 253 MAAGIAVIAAFVRLERSVARRGGMPLIDLSLLSDRAFMGGLVAVFFFFFANLSFYLIMTM 312 MA G A++A F+R ER VA RGGMP++DL+LL DRAF+ GL AVF FFFAN SFYL+MT+ Sbjct: 241 MAGGGAMLALFLRYERRVAARGGMPVVDLTLLGDRAFVRGLGAVFCFFFANQSFYLVMTL 300 Query: 313 FMQKGLKIPPLQAGLVFVPLALTFVIASRHSGLRARHRGTLVLIEGCALQIVGLAVLVAT 372 +MQ L +PPLQAGLVF+PLAL FVIASRHSG RAR RGTLVLIEGC LQI GL ++ AT Sbjct: 301 YMQFELNVPPLQAGLVFLPLALAFVIASRHSGARARRRGTLVLIEGCLLQIAGLGLIAAT 360 Query: 373 IEAVAAPSALLLALLLMIFGYGQGLVMAPLSSAVLASVQPASAGAGSGMYGTTTQIGNAA 432 +A+P+ +LAL L++ GYGQGLVMAPLS VL+SVQ SAG+GSG+YGTTTQI +AA Sbjct: 361 ATVIASPTPFVLALALLVAGYGQGLVMAPLSGVVLSSVQATSAGSGSGLYGTTTQIASAA 420 Query: 433 GVAAIGAVFFAIESTMSARLALIAACALFVLSITISAAFLSWMRRASA 480 GVA +G+V+F + S R+AL+ A AL +I L WMRRA A Sbjct: 421 GVAVLGSVYFTLAQNGSGRVALLGALALLGFAIAGCIGLLRWMRRAVA 468 >ref|YP_001989889.1| major facilitator superfamily protein [Rhodopseudomonas palustris TIE-1] gb|ACE99413.1| major facilitator superfamily MFS_1 [Rhodopseudomonas palustris TIE-1] Length = 471 Score = 625 bits (1612), Expect = e-177, Method: Compositional matrix adjust. Identities = 322/468 (68%), Positives = 383/468 (81%) Query: 13 MHQIVSTRADTSRRWWVLAIVVSAQFMFGVDAFIVNVAIPTIAAELHATPAQIEAVIAIY 72 MHQ V+ D SRRW VLAIVV+AQFMFGVDAFIVNVA+PTI++EL A+ +Q+EAVIAIY Sbjct: 1 MHQTVAATIDNSRRWRVLAIVVAAQFMFGVDAFIVNVALPTISSELGASSSQLEAVIAIY 60 Query: 73 LIAYATLVVTGGRLGDIHGTRNVFIAGVAGFSVTSLWCGLAQSGPELIVARLAQGATAAL 132 LI YATL+V GGRLGDI GT+ VF+ GVAGF++TSLWCGLA+SGPELI+ARLAQG TAA Sbjct: 61 LIGYATLIVAGGRLGDIFGTKTVFLLGVAGFTLTSLWCGLARSGPELILARLAQGTTAAF 120 Query: 133 MVPQVLATLHLLFSDAARARAFGIYGIVLGLAGAAGFMLGGVLVTLDLAGLGWRAVFFVN 192 MVPQVLATLH+LF DAARA+AF IYG VLGLAGA GF LGG+LVTLDL G GWR++F+VN Sbjct: 121 MVPQVLATLHVLFPDAARAKAFAIYGTVLGLAGATGFALGGLLVTLDLGGFGWRSIFYVN 180 Query: 193 VPCGVVIIAAALKIMPTVPRRAGTRLDIPGAIVLFAGLLCLIGPLLFGHDLNWTGWVWLV 252 P G++IIAAA ++MP PRR GTRLD+ GA++LFAGL+C+IGPLLFG D W GWVW V Sbjct: 181 GPVGLIIIAAAARVMPQTPRRPGTRLDLGGAVILFAGLVCVIGPLLFGRDFGWAGWVWAV 240 Query: 253 MAAGIAVIAAFVRLERSVARRGGMPLIDLSLLSDRAFMGGLVAVFFFFFANLSFYLIMTM 312 MA G A++A F+R ER VA RGGMP++DL+LL DRAF+ GL AVF FFFAN SFYL+MT+ Sbjct: 241 MAGGGAMLALFLRYERRVAARGGMPVVDLTLLGDRAFVRGLGAVFCFFFANQSFYLVMTL 300 Query: 313 FMQKGLKIPPLQAGLVFVPLALTFVIASRHSGLRARHRGTLVLIEGCALQIVGLAVLVAT 372 +MQ L IPPLQAGLVF+PLAL FVIASRHSG RAR RGTLVLIEGC LQI GL ++ AT Sbjct: 301 YMQFELNIPPLQAGLVFLPLALAFVIASRHSGARARRRGTLVLIEGCLLQIAGLGLIAAT 360 Query: 373 IEAVAAPSALLLALLLMIFGYGQGLVMAPLSSAVLASVQPASAGAGSGMYGTTTQIGNAA 432 + +A+P+ +LAL L++ GYGQGLVMAPLS VL+SVQ SAG+GSG+YGTTTQI +A Sbjct: 361 VTVIASPTPFVLALALLVAGYGQGLVMAPLSGVVLSSVQATSAGSGSGLYGTTTQIASAV 420 Query: 433 GVAAIGAVFFAIESTMSARLALIAACALFVLSITISAAFLSWMRRASA 480 GVAA+G+V+F + S R+AL+ A AL L+I L WMRRA A Sbjct: 421 GVAALGSVYFTLAQNGSGRVALLGALALLGLAIAGCIGLLRWMRRAVA 468 >ref|YP_004107309.1| major facilitator superfamily protein [Rhodopseudomonas palustris DX-1] gb|ADU42576.1| major facilitator superfamily MFS_1 [Rhodopseudomonas palustris DX-1] Length = 471 Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust. Identities = 318/468 (67%), Positives = 382/468 (81%) Query: 13 MHQIVSTRADTSRRWWVLAIVVSAQFMFGVDAFIVNVAIPTIAAELHATPAQIEAVIAIY 72 MHQ V+ D SRRW VLAIVV+AQFMFGVDAFIVNVA+PTI+ EL A+ +Q+EAVIA+Y Sbjct: 1 MHQTVAATIDNSRRWRVLAIVVAAQFMFGVDAFIVNVALPTISTELGASSSQLEAVIAVY 60 Query: 73 LIAYATLVVTGGRLGDIHGTRNVFIAGVAGFSVTSLWCGLAQSGPELIVARLAQGATAAL 132 LI YATL+VTGGRLGDI GT+ VF+ GVAGF++ SLWCGLA+SGPELI+ARLAQG TAA Sbjct: 61 LIGYATLIVTGGRLGDIFGTKTVFLLGVAGFTLASLWCGLARSGPELILARLAQGTTAAF 120 Query: 133 MVPQVLATLHLLFSDAARARAFGIYGIVLGLAGAAGFMLGGVLVTLDLAGLGWRAVFFVN 192 MVPQVLATLH+LF DAARA+AF IYG VLGLAGA GF LGG+LVTLDL G GWR++F+VN Sbjct: 121 MVPQVLATLHVLFPDAARAKAFAIYGTVLGLAGATGFALGGLLVTLDLGGFGWRSIFYVN 180 Query: 193 VPCGVVIIAAALKIMPTVPRRAGTRLDIPGAIVLFAGLLCLIGPLLFGHDLNWTGWVWLV 252 P G++IIAAA +++P PRR GTRLD+ GA++LFAGL+C+IGPLLFG D+ W GWVW V Sbjct: 181 GPVGLIIIAAAARVIPQTPRRPGTRLDLGGAVILFAGLVCVIGPLLFGRDVGWAGWVWAV 240 Query: 253 MAAGIAVIAAFVRLERSVARRGGMPLIDLSLLSDRAFMGGLVAVFFFFFANLSFYLIMTM 312 MA G A++A F+R ER VA RGGMP++DL+LL+DRAF+ GL AVF FF AN SFYL+MT+ Sbjct: 241 MAGGGAMLALFLRYERRVAARGGMPVVDLTLLADRAFVRGLGAVFCFFVANQSFYLVMTL 300 Query: 313 FMQKGLKIPPLQAGLVFVPLALTFVIASRHSGLRARHRGTLVLIEGCALQIVGLAVLVAT 372 +MQ L +PPLQAGLVF+PLAL FVIASRHSG RAR RGTLVLIEGC LQI G ++ T Sbjct: 301 YMQLELNVPPLQAGLVFLPLALAFVIASRHSGARARRRGTLVLIEGCLLQIAGFGLIAVT 360 Query: 373 IEAVAAPSALLLALLLMIFGYGQGLVMAPLSSAVLASVQPASAGAGSGMYGTTTQIGNAA 432 + +A+P+ +LAL L++ GYGQGLVMAPLS VL+SVQ SAG+GSG+YGTTTQI +AA Sbjct: 361 VTVIASPTPFVLALALLVAGYGQGLVMAPLSGVVLSSVQATSAGSGSGLYGTTTQIASAA 420 Query: 433 GVAAIGAVFFAIESTMSARLALIAACALFVLSITISAAFLSWMRRASA 480 GVAA+G+V+F + S RLAL+ A AL L+I L WMRRA A Sbjct: 421 GVAALGSVYFTLAQNGSGRLALLGALALLGLAIAGCIGLLRWMRRAVA 468 >ref|YP_488228.1| major facilitator transporter [Rhodopseudomonas palustris HaA2] gb|ABD09317.1| Major facilitator superfamily MFS_1 [Rhodopseudomonas palustris HaA2] Length = 471 Score = 602 bits (1551), Expect = e-170, Method: Compositional matrix adjust. Identities = 315/467 (67%), Positives = 391/467 (83%) Query: 13 MHQIVSTRADTSRRWWVLAIVVSAQFMFGVDAFIVNVAIPTIAAELHATPAQIEAVIAIY 72 M Q ++ +SRRW VLAIVV+AQFMFGVD+FIVNVAIPTI+ EL+A+ +Q+EAVIAIY Sbjct: 1 MDQTLAVTTASSRRWRVLAIVVAAQFMFGVDSFIVNVAIPTISVELNASSSQLEAVIAIY 60 Query: 73 LIAYATLVVTGGRLGDIHGTRNVFIAGVAGFSVTSLWCGLAQSGPELIVARLAQGATAAL 132 LI YATL+VTGGRLGDI+GT+ VF+AGV GF++TSLWCGLA+SG ELI+ARLAQG TAAL Sbjct: 61 LIGYATLIVTGGRLGDIYGTKTVFLAGVIGFTLTSLWCGLARSGTELILARLAQGTTAAL 120 Query: 133 MVPQVLATLHLLFSDAARARAFGIYGIVLGLAGAAGFMLGGVLVTLDLAGLGWRAVFFVN 192 MVPQVLATLH+LF DAARA+AF IYGIVLGLAGAAGF LGG+LVTLDL G GWRA+FFVN Sbjct: 121 MVPQVLATLHVLFPDAARAKAFAIYGIVLGLAGAAGFALGGLLVTLDLGGYGWRAIFFVN 180 Query: 193 VPCGVVIIAAALKIMPTVPRRAGTRLDIPGAIVLFAGLLCLIGPLLFGHDLNWTGWVWLV 252 P G++I AAA ++P PRR GTRLD+PGA++LF GLLC+IGPLLFG +++W GW+W+V Sbjct: 181 GPVGLIIFAAAAWVVPQAPRRPGTRLDLPGAVILFTGLLCVIGPLLFGREVDWAGWIWVV 240 Query: 253 MAAGIAVIAAFVRLERSVARRGGMPLIDLSLLSDRAFMGGLVAVFFFFFANLSFYLIMTM 312 MAAG+A++ F+R ER VA RGGMPLIDL+LL+D AFM GL AVF FFFAN SFYL++T+ Sbjct: 241 MAAGVAIVLIFLRYERGVAARGGMPLIDLALLADSAFMRGLGAVFCFFFANQSFYLVVTL 300 Query: 313 FMQKGLKIPPLQAGLVFVPLALTFVIASRHSGLRARHRGTLVLIEGCALQIVGLAVLVAT 372 +MQ L+IPPL AGLVF+PLAL FVIA+RHSG RAR RGTLVLIEGC LQI GLA++ T Sbjct: 301 YMQMVLEIPPLPAGLVFLPLALAFVIAARHSGARARRRGTLVLIEGCLLQIAGLALVALT 360 Query: 373 IEAVAAPSALLLALLLMIFGYGQGLVMAPLSSAVLASVQPASAGAGSGMYGTTTQIGNAA 432 + + AP+ +LAL+L++ GYGQGLVMAPLS AVL++VQ ASAG+GSG+YGT TQI +AA Sbjct: 361 VAMIEAPTPFVLALVLIVVGYGQGLVMAPLSGAVLSTVQAASAGSGSGLYGTATQISSAA 420 Query: 433 GVAAIGAVFFAIESTMSARLALIAACALFVLSITISAAFLSWMRRAS 479 G+AAIG+++F+++ +S + A + A ++ S+ S L WMRRA+ Sbjct: 421 GIAAIGSLYFSLDHAISGQFAFLVALSVIAGSVAGSIILLHWMRRAA 467