BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0240.0016.p (276 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAQ57559.1| hypothetical protein [Bradyrhizobium elkanii] 556 e-156 ref|YP_002288314.1| hypothetical protein OCAR_5317 [Oligotropha ... 474 e-132 ref|ZP_08630629.1| hypothetical protein CSIRO_3739 [Bradyrhizobi... 473 e-131 ref|YP_577804.1| hypothetical protein Nham_2562 [Nitrobacter ham... 461 e-128 ref|YP_318768.1| hypothetical protein Nwi_2162 [Nitrobacter wino... 445 e-123 >emb|CAQ57559.1| hypothetical protein [Bradyrhizobium elkanii] Length = 313 Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust. Identities = 276/276 (100%), Positives = 276/276 (100%) Query: 1 MIPDVAEPVVRQILAAKASATGLKPVVLDVGCSYGINAAVHRFPLTFGGLRHRYARREMR 60 MIPDVAEPVVRQILAAKASATGLKPVVLDVGCSYGINAAVHRFPLTFGGLRHRYARREMR Sbjct: 38 MIPDVAEPVVRQILAAKASATGLKPVVLDVGCSYGINAAVHRFPLTFGGLRHRYARREMR 97 Query: 61 AISSETLVSLDRNFYAAWPDVGLARFIGLDVSVQAISYAKSVGLLEQGIVADLEKEALST 120 AISSETLVSLDRNFYAAWPDVGLARFIGLDVSVQAISYAKSVGLLEQGIVADLEKEALST Sbjct: 98 AISSETLVSLDRNFYAAWPDVGLARFIGLDVSVQAISYAKSVGLLEQGIVADLEKEALST 157 Query: 121 DSARILRSVDVIMSTGCIGYVTEKTFSEILDATEKQPWIISFVLRMFPFESLAEAFAKRG 180 DSARILRSVDVIMSTGCIGYVTEKTFSEILDATEKQPWIISFVLRMFPFESLAEAFAKRG Sbjct: 158 DSARILRSVDVIMSTGCIGYVTEKTFSEILDATEKQPWIISFVLRMFPFESLAEAFAKRG 217 Query: 181 LVTERLTGATFIQRRFRDAEEFESCLASLAALGVDATGLESEGLLHADLILSRPEADARA 240 LVTERLTGATFIQRRFRDAEEFESCLASLAALGVDATGLESEGLLHADLILSRPEADARA Sbjct: 218 LVTERLTGATFIQRRFRDAEEFESCLASLAALGVDATGLESEGLLHADLILSRPEADARA 277 Query: 241 TPLEDVVTVASGRGRPIGPRYVHVESNEGLHVALEP 276 TPLEDVVTVASGRGRPIGPRYVHVESNEGLHVALEP Sbjct: 278 TPLEDVVTVASGRGRPIGPRYVHVESNEGLHVALEP 313 >ref|YP_002288314.1| hypothetical protein OCAR_5317 [Oligotropha carboxidovorans OM5] ref|YP_004633593.1| hypothetical protein OCA5_c26570 [Oligotropha carboxidovorans OM5] gb|ACI92449.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5] gb|AEI03775.1| hypothetical protein OCA4_c26560 [Oligotropha carboxidovorans OM4] gb|AEI07352.1| hypothetical protein OCA5_c26570 [Oligotropha carboxidovorans OM5] Length = 310 Score = 474 bits (1221), Expect = e-132, Method: Compositional matrix adjust. Identities = 232/276 (84%), Positives = 247/276 (89%) Query: 1 MIPDVAEPVVRQILAAKASATGLKPVVLDVGCSYGINAAVHRFPLTFGGLRHRYARREMR 60 MIPDVAEPVVRQIL+AKAS TG+KP VLDVGCSYGINAAVHRFPLTF GLRHRYARRE+R Sbjct: 35 MIPDVAEPVVRQILSAKASMTGVKPTVLDVGCSYGINAAVHRFPLTFTGLRHRYARREIR 94 Query: 61 AISSETLVSLDRNFYAAWPDVGLARFIGLDVSVQAISYAKSVGLLEQGIVADLEKEALST 120 A+SSETLV LDRNFYAAWPDVGLARFIGLD+S AI YA VGLLEQG+VADLE LS Sbjct: 95 AVSSETLVELDRNFYAAWPDVGLARFIGLDISAPAIRYATGVGLLEQGVVADLETGDLSV 154 Query: 121 DSARILRSVDVIMSTGCIGYVTEKTFSEILDATEKQPWIISFVLRMFPFESLAEAFAKRG 180 + ARI+RS DVIMSTGCIGYVTEKTF +ILDATE+ PWIISFVLRMFPFE LA FAKRG Sbjct: 155 EDARIVRSADVIMSTGCIGYVTEKTFGKILDATERHPWIISFVLRMFPFEPLAATFAKRG 214 Query: 181 LVTERLTGATFIQRRFRDAEEFESCLASLAALGVDATGLESEGLLHADLILSRPEADARA 240 VTERL GATFIQRRF DAEEFE+ LA+LAALG+DATGLESEGL HADLILSRPEADARA Sbjct: 215 FVTERLAGATFIQRRFHDAEEFENTLATLAALGIDATGLESEGLFHADLILSRPEADARA 274 Query: 241 TPLEDVVTVASGRGRPIGPRYVHVESNEGLHVALEP 276 PLED+VTVASGRGRPIG RYVHVE +EGL VALEP Sbjct: 275 APLEDIVTVASGRGRPIGSRYVHVEGDEGLRVALEP 310 >ref|ZP_08630629.1| hypothetical protein CSIRO_3739 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07008.1| hypothetical protein CSIRO_3739 [Bradyrhizobiaceae bacterium SG-6C] Length = 316 Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust. Identities = 226/276 (81%), Positives = 248/276 (89%) Query: 1 MIPDVAEPVVRQILAAKASATGLKPVVLDVGCSYGINAAVHRFPLTFGGLRHRYARREMR 60 MIPDVAEPVVRQIL+AK SAT KPVVLD+GCSYGINAAVHRFPLTFGGLRHRYARREM+ Sbjct: 41 MIPDVAEPVVRQILSAKFSATAAKPVVLDIGCSYGINAAVHRFPLTFGGLRHRYARREMK 100 Query: 61 AISSETLVSLDRNFYAAWPDVGLARFIGLDVSVQAISYAKSVGLLEQGIVADLEKEALST 120 A++SE L+ DRNFY++WPDVGLARFIGLDVS A+ YA SVGLL++GIVADLE +ALS Sbjct: 101 AVTSEELMQFDRNFYSSWPDVGLARFIGLDVSAPAVHYATSVGLLDKGIVADLENDALSA 160 Query: 121 DSARILRSVDVIMSTGCIGYVTEKTFSEILDATEKQPWIISFVLRMFPFESLAEAFAKRG 180 ++A I+R DVIMSTGCIGYVTEKTF +ILDAT+K PWIISFVLRMFPFESLA FA+RG Sbjct: 161 ENAAIVRHADVIMSTGCIGYVTEKTFGKILDATDKTPWIISFVLRMFPFESLAATFAQRG 220 Query: 181 LVTERLTGATFIQRRFRDAEEFESCLASLAALGVDATGLESEGLLHADLILSRPEADARA 240 LVTERLTG TFIQRRFRDAEEFES LA+LA GVD+TGLESEGL HADLILSRPEADARA Sbjct: 221 LVTERLTGVTFIQRRFRDAEEFESTLANLADAGVDSTGLESEGLFHADLILSRPEADARA 280 Query: 241 TPLEDVVTVASGRGRPIGPRYVHVESNEGLHVALEP 276 PLED+VTVASGRGRPI PRYVHVE+NEGL V LEP Sbjct: 281 APLEDIVTVASGRGRPIAPRYVHVENNEGLQVTLEP 316 >ref|YP_577804.1| hypothetical protein Nham_2562 [Nitrobacter hamburgensis X14] gb|ABE63344.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 313 Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust. Identities = 219/276 (79%), Positives = 248/276 (89%) Query: 1 MIPDVAEPVVRQILAAKASATGLKPVVLDVGCSYGINAAVHRFPLTFGGLRHRYARREMR 60 MI DVAEPV+RQIL+AKASAT KPVVLDVGCSYGINAAVHRFPLTFGGLRHRYARRE++ Sbjct: 38 MITDVAEPVIRQILSAKASATNTKPVVLDVGCSYGINAAVHRFPLTFGGLRHRYARREIK 97 Query: 61 AISSETLVSLDRNFYAAWPDVGLARFIGLDVSVQAISYAKSVGLLEQGIVADLEKEALST 120 A+S E L+ D NFYA+WPD+GLARFIGLDVS A+ YA VG+L+QGIVADLE EALS Sbjct: 98 AVSPEELMRFDHNFYASWPDLGLARFIGLDVSAPAVRYATRVGILDQGIVADLENEALSP 157 Query: 121 DSARILRSVDVIMSTGCIGYVTEKTFSEILDATEKQPWIISFVLRMFPFESLAEAFAKRG 180 +SARI+R VDVIMSTGCIGYVTEKTFS++LDATEK+PWIISFVLRMFPF+++A+ FA+RG Sbjct: 158 ESARIIRPVDVIMSTGCIGYVTEKTFSKLLDATEKKPWIISFVLRMFPFDAIAKTFAQRG 217 Query: 181 LVTERLTGATFIQRRFRDAEEFESCLASLAALGVDATGLESEGLLHADLILSRPEADARA 240 LVTERL+G TF+QRRFRDAEEFE+ LA+LAA +D TGLESEGL HADLILSRPEADARA Sbjct: 218 LVTERLSGVTFVQRRFRDAEEFENSLANLAAAEIDPTGLESEGLFHADLILSRPEADARA 277 Query: 241 TPLEDVVTVASGRGRPIGPRYVHVESNEGLHVALEP 276 PLED+VTVASGRGRPI PRYVHVES++G V LEP Sbjct: 278 APLEDIVTVASGRGRPIAPRYVHVESDDGPRVTLEP 313 >ref|YP_318768.1| hypothetical protein Nwi_2162 [Nitrobacter winogradskyi Nb-255] gb|ABA05416.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255] Length = 322 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 213/276 (77%), Positives = 242/276 (87%) Query: 1 MIPDVAEPVVRQILAAKASATGLKPVVLDVGCSYGINAAVHRFPLTFGGLRHRYARREMR 60 MI DVAEPV+RQIL+AKAS T KPVVLDVGCSYGINAAVHRFPLTFGGLRHRYARRE++ Sbjct: 47 MITDVAEPVIRQILSAKASVTESKPVVLDVGCSYGINAAVHRFPLTFGGLRHRYARREIK 106 Query: 61 AISSETLVSLDRNFYAAWPDVGLARFIGLDVSVQAISYAKSVGLLEQGIVADLEKEALST 120 A+SSE L+ LDRNFYA+WPD GLARFIGLDVS A+ YA VGLL+QGIVADLE + LS Sbjct: 107 AVSSEELMQLDRNFYASWPDHGLARFIGLDVSAPAVRYATRVGLLDQGIVADLESQPLSA 166 Query: 121 DSARILRSVDVIMSTGCIGYVTEKTFSEILDATEKQPWIISFVLRMFPFESLAEAFAKRG 180 + A I++ DVI+STGCIGYVTEKTF ++LDATEK+PWIISFVLRMFP++SL + FA+RG Sbjct: 167 EDACIIKPADVILSTGCIGYVTEKTFGKLLDATEKKPWIISFVLRMFPYDSLEKTFAQRG 226 Query: 181 LVTERLTGATFIQRRFRDAEEFESCLASLAALGVDATGLESEGLLHADLILSRPEADARA 240 LVTE+L G TFIQRRFRDAEEFE+ LA+LAA +D+TGLESEGL HADLILSRPEADAR Sbjct: 227 LVTEKLGGVTFIQRRFRDAEEFENSLATLAAAHIDSTGLESEGLFHADLILSRPEADARV 286 Query: 241 TPLEDVVTVASGRGRPIGPRYVHVESNEGLHVALEP 276 LED+VTVASGRGRPI PRYVHVES++GL V LEP Sbjct: 287 ASLEDIVTVASGRGRPIAPRYVHVESDDGLQVTLEP 322