BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0240.0001.p (481 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAX45873.1| putative Zn-dependent protease, peptidase-M16 su... 976 0.0 ref|NP_774125.1| zinc protease [Bradyrhizobium japonicum USDA 11... 627 e-177 ref|YP_001207939.1| putative Zn-dependent protease [Bradyrhizobi... 616 e-174 ref|YP_780350.1| peptidase M16 domain-containing protein [Rhodop... 609 e-172 ref|YP_531272.1| peptidase M16-like [Rhodopseudomonas palustris ... 604 e-170 >emb|CAX45873.1| putative Zn-dependent protease, peptidase-M16 superfamily [Bradyrhizobium elkanii] Length = 505 Score = 976 bits (2523), Expect = 0.0, Method: Compositional matrix adjust. Identities = 481/481 (100%), Positives = 481/481 (100%) Query: 1 MTCSFTRRSVLIGGASLSIGMLVSPDSLGAAKSVAAAKIQRLVSPCGVEAWFVKDATVPF 60 MTCSFTRRSVLIGGASLSIGMLVSPDSLGAAKSVAAAKIQRLVSPCGVEAWFVKDATVPF Sbjct: 25 MTCSFTRRSVLIGGASLSIGMLVSPDSLGAAKSVAAAKIQRLVSPCGVEAWFVKDATVPF 84 Query: 61 IAMEFAFNGGATQDPADKAGVGHMVADLLDEGSGDLDSKSFHERLDRRAIELSFGSTRDQ 120 IAMEFAFNGGATQDPADKAGVGHMVADLLDEGSGDLDSKSFHERLDRRAIELSFGSTRDQ Sbjct: 85 IAMEFAFNGGATQDPADKAGVGHMVADLLDEGSGDLDSKSFHERLDRRAIELSFGSTRDQ 144 Query: 121 FRGALRTLEENADEAFDLLRMALTLPRFDAADVERIRASLLANLRNDSNNPSSLANRKFL 180 FRGALRTLEENADEAFDLLRMALTLPRFDAADVERIRASLLANLRNDSNNPSSLANRKFL Sbjct: 145 FRGALRTLEENADEAFDLLRMALTLPRFDAADVERIRASLLANLRNDSNNPSSLANRKFL 204 Query: 181 EVAFNDHPYARPAGGTLESVPKIGVTDLKGYVRRVIAKDTLKIAVVGDIQPDVLCGLLDK 240 EVAFNDHPYARPAGGTLESVPKIGVTDLKGYVRRVIAKDTLKIAVVGDIQPDVLCGLLDK Sbjct: 205 EVAFNDHPYARPAGGTLESVPKIGVTDLKGYVRRVIAKDTLKIAVVGDIQPDVLCGLLDK 264 Query: 241 AFGGLPAKADSVPIRDVVAAKPPQRVFIPLDVAQTAVTFGGPGVRRSKPDFMAANIVNHV 300 AFGGLPAKADSVPIRDVVAAKPPQRVFIPLDVAQTAVTFGGPGVRRSKPDFMAANIVNHV Sbjct: 265 AFGGLPAKADSVPIRDVVAAKPPQRVFIPLDVAQTAVTFGGPGVRRSKPDFMAANIVNHV 324 Query: 301 LGGDGLSSRLFREVREKRGLAYSVRQQLVWMNHSAVFVGNSGTRANRAGETLEEIEKQVR 360 LGGDGLSSRLFREVREKRGLAYSVRQQLVWMNHSAVFVGNSGTRANRAGETLEEIEKQVR Sbjct: 325 LGGDGLSSRLFREVREKRGLAYSVRQQLVWMNHSAVFVGNSGTRANRAGETLEEIEKQVR 384 Query: 361 RIADEGPTRQELDDAKSYLKGSKMLALNSSSKLARTLLQHQLDKLPIDYIENYNTIVDAV 420 RIADEGPTRQELDDAKSYLKGSKMLALNSSSKLARTLLQHQLDKLPIDYIENYNTIVDAV Sbjct: 385 RIADEGPTRQELDDAKSYLKGSKMLALNSSSKLARTLLQHQLDKLPIDYIENYNTIVDAV 444 Query: 421 TLEDARKVAQRLWGQGLLTVIVGRSPPVAAESAPVPSATTTPSHAEQLGATPSPALPRKP 480 TLEDARKVAQRLWGQGLLTVIVGRSPPVAAESAPVPSATTTPSHAEQLGATPSPALPRKP Sbjct: 445 TLEDARKVAQRLWGQGLLTVIVGRSPPVAAESAPVPSATTTPSHAEQLGATPSPALPRKP 504 Query: 481 N 481 N Sbjct: 505 N 505 >ref|NP_774125.1| zinc protease [Bradyrhizobium japonicum USDA 110] dbj|BAC52750.1| hypothetical zinc protease [Bradyrhizobium japonicum USDA 110] Length = 483 Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust. Identities = 306/441 (69%), Positives = 366/441 (82%), Gaps = 10/441 (2%) Query: 6 TRRSVL--IGGASLSIGMLVSPDSLGAAKSVAAAKIQRLVSPCGVEAWFVKDATVPFIAM 63 TRR L + GA+L++ V P S AAAKIQRLVSP G+EAWFV+DATVP IAM Sbjct: 34 TRRFALAFVTGAALALAA-VQP-------SQAAAKIQRLVSPGGIEAWFVQDATVPLIAM 85 Query: 64 EFAFNGGATQDPADKAGVGHMVADLLDEGSGDLDSKSFHERLDRRAIELSFGSTRDQFRG 123 E++F GG+ QDP DKAGV ++V DLLDEGSGDLDSK+FHERLDRRAIELSF +TRD FRG Sbjct: 86 EYSFAGGSAQDPKDKAGVANLVGDLLDEGSGDLDSKTFHERLDRRAIELSFSATRDTFRG 145 Query: 124 ALRTLEENADEAFDLLRMALTLPRFDAADVERIRASLLANLRNDSNNPSSLANRKFLEVA 183 +LR L +N DEAFDLLRMALT P FD ADVERIR+ +++ LR ++ NP+SLA+RKFLEVA Sbjct: 146 SLRMLRDNKDEAFDLLRMALTSPHFDTADVERIRSQVISGLRRETTNPTSLASRKFLEVA 205 Query: 184 FNDHPYARPAGGTLESVPKIGVTDLKGYVRRVIAKDTLKIAVVGDIQPDVLCGLLDKAFG 243 F DHPY R GTL+SVP + V D+K YV RV+AKD LK+AVVGD+ P L LLD FG Sbjct: 206 FGDHPYGRQTNGTLDSVPTVTVADMKDYVGRVLAKDGLKVAVVGDVDPATLGKLLDHTFG 265 Query: 244 GLPAKADSVPIRDVVAAKPPQRVFIPLDVAQTAVTFGGPGVRRSKPDFMAANIVNHVLGG 303 LPAKA+ VP+ DV AAKPPQR F+PLDV QT +TFGGPGV+RS P+FMAA +VNH+LGG Sbjct: 266 SLPAKANLVPVPDVEAAKPPQRAFVPLDVPQTVITFGGPGVKRSDPNFMAAYVVNHILGG 325 Query: 304 DGLSSRLFREVREKRGLAYSVRQQLVWMNHSAVFVGNSGTRANRAGETLEEIEKQVRRIA 363 GLSSRL+REVREKRGLAYSV + L+WM HSAVF+GN+GTRA+RAG+T++ IEK+VRRIA Sbjct: 326 GGLSSRLYREVREKRGLAYSVFESLLWMEHSAVFIGNTGTRADRAGDTIDAIEKEVRRIA 385 Query: 364 DEGPTRQELDDAKSYLKGSKMLALNSSSKLARTLLQHQLDKLPIDYIENYNTIVDAVTLE 423 +EGPT++ELD+AKSYLKGS+MLAL++SSKLA+ LLQ+Q DKLPIDYIE N IVDAVTL+ Sbjct: 386 EEGPTQKELDEAKSYLKGSQMLALDTSSKLAQALLQYQQDKLPIDYIEKRNAIVDAVTLD 445 Query: 424 DARKVAQRLWGQGLLTVIVGR 444 DA+ A+RLWGQGLLTV+VGR Sbjct: 446 DAKAAAKRLWGQGLLTVVVGR 466 >ref|YP_001207939.1| putative Zn-dependent protease [Bradyrhizobium sp. ORS 278] emb|CAL79724.1| putative Zn-dependent protease [Bradyrhizobium sp. ORS 278] Length = 459 Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust. Identities = 288/424 (67%), Positives = 353/424 (83%) Query: 38 KIQRLVSPCGVEAWFVKDATVPFIAMEFAFNGGATQDPADKAGVGHMVADLLDEGSGDLD 97 KIQRLVSP G+EAWFV+DATVP IAME+AF GGA+QDPA K GVG++VADLLDEGSGDLD Sbjct: 32 KIQRLVSPGGIEAWFVQDATVPLIAMEYAFEGGASQDPAGKPGVGNLVADLLDEGSGDLD 91 Query: 98 SKSFHERLDRRAIELSFGSTRDQFRGALRTLEENADEAFDLLRMALTLPRFDAADVERIR 157 SK+FHERLDRRAIELSF +RDQFRG+LR L + DEAFDLLR ALT P FD+ DVERIR Sbjct: 92 SKTFHERLDRRAIELSFQVSRDQFRGSLRMLRDTKDEAFDLLRTALTSPHFDSTDVERIR 151 Query: 158 ASLLANLRNDSNNPSSLANRKFLEVAFNDHPYARPAGGTLESVPKIGVTDLKGYVRRVIA 217 + +++ LR ++ NPSSLA RKFLE+AF +HPY RPA GTLE+VP I V DLK YV RV+A Sbjct: 152 SQVISGLRRETTNPSSLAGRKFLELAFPNHPYGRPANGTLETVPTITVDDLKSYVGRVLA 211 Query: 218 KDTLKIAVVGDIQPDVLCGLLDKAFGGLPAKADSVPIRDVVAAKPPQRVFIPLDVAQTAV 277 KDTLK+AVVGD+ P L LLD+ FG LPAKA P+ D+VA KPPQRV +PLDV QT + Sbjct: 212 KDTLKVAVVGDVDPATLGKLLDQTFGALPAKAQLTPVPDIVATKPPQRVLVPLDVPQTVI 271 Query: 278 TFGGPGVRRSKPDFMAANIVNHVLGGDGLSSRLFREVREKRGLAYSVRQQLVWMNHSAVF 337 TFGGPG+RR P+FMAA +VNH+LGG GLSSRL++EVREKRGLAYSV L+WM+HSA+F Sbjct: 272 TFGGPGIRRHDPNFMAAYVVNHILGGGGLSSRLYKEVREKRGLAYSVYDALLWMDHSALF 331 Query: 338 VGNSGTRANRAGETLEEIEKQVRRIADEGPTRQELDDAKSYLKGSKMLALNSSSKLARTL 397 +GN+ TR +RAGET+ +E+++RRIA+EGPT+QELD+AKSY+ GS+MLAL++SSKLA+ + Sbjct: 332 IGNTATRFDRAGETIAAVEQEIRRIAEEGPTQQELDEAKSYINGSQMLALDTSSKLAQAM 391 Query: 398 LQHQLDKLPIDYIENYNTIVDAVTLEDARKVAQRLWGQGLLTVIVGRSPPVAAESAPVPS 457 LQ+QLDK+PIDYIE + IV+AVTL+DA+K A++LW QGLLT +VGR+P AAE P+ Sbjct: 392 LQYQLDKMPIDYIEKRSEIVNAVTLDDAKKAAKQLWSQGLLTAVVGRTPQAAAEPGQAPA 451 Query: 458 ATTT 461 T Sbjct: 452 TAPT 455 >ref|YP_780350.1| peptidase M16 domain-containing protein [Rhodopseudomonas palustris BisA53] gb|ABJ05370.1| peptidase M16 domain protein [Rhodopseudomonas palustris BisA53] Length = 458 Score = 609 bits (1570), Expect = e-172, Method: Compositional matrix adjust. Identities = 298/458 (65%), Positives = 360/458 (78%), Gaps = 10/458 (2%) Query: 8 RSVLIGGASLSIGMLVSPDSLGAAKSVAAAKIQRLVSPCGVEAWFVKDATVPFIAMEFAF 67 R+ +I A + + +L + + AAAK+QRLVSP G+EAWFV+DATVP IAME+ F Sbjct: 10 RTAMIAAACVGLA------ALSSTAANAAAKVQRLVSPGGIEAWFVQDATVPLIAMEYGF 63 Query: 68 NGGATQDPADKAGVGHMVADLLDEGSGDLDSKSFHERLDRRAIELSFGSTRDQFRGALRT 127 GGATQDPADK GVGH+VA+LLDEGSGDLDS++FHERLDRRAIELSF STRDQFRG+LR Sbjct: 64 GGGATQDPADKPGVGHLVANLLDEGSGDLDSRTFHERLDRRAIELSFSSTRDQFRGSLRM 123 Query: 128 LEENADEAFDLLRMALTLPRFDAADVERIRASLLANLRNDSNNPSSLANRKFLEVAFNDH 187 L E+ DEAFDLLR ALT PRF+A DVERIRA A LR +S +P+S++ RKF E+AF DH Sbjct: 124 LTEHRDEAFDLLRGALTQPRFEADDVERIRAQFAATLRRESTSPNSMSTRKFFELAFGDH 183 Query: 188 PYARPAGGTLESVPKIGVTDLKGYVRRVIAKDTLKIAVVGDIQPDVLCGLLDKAFGGLPA 247 PY R GTLES+ KI V DL+ Y +RV+AKDTLKIAVVGD+ L LLDK FG LPA Sbjct: 184 PYGRLPSGTLESIAKINVDDLRSYTKRVLAKDTLKIAVVGDVDAQTLGRLLDKTFGALPA 243 Query: 248 KADSVPIRDVVAAKPPQRVFIPLDVAQTAVTFGGPGVRRSKPDFMAANIVNHVLGGDGLS 307 KAD V + +VVA KPPQR + LDV QT VTFGGPG++R DFMAA +VNH++GG GLS Sbjct: 244 KADLVAVPEVVATKPPQRALVALDVPQTTVTFGGPGLKRDDKDFMAAYVVNHIIGGGGLS 303 Query: 308 SRLFREVREKRGLAYSVRQQLVWMNHSAVFVGNSGTRANRAGETLEEIEKQVRRIADEGP 367 SRL+REVREKRGLAYSV + L+WM+HSA+F+GN+GTRA+R ET+E IE++ +RIADEGP Sbjct: 304 SRLYREVREKRGLAYSVYEALLWMDHSALFIGNTGTRADRVAETIEAIEQETKRIADEGP 363 Query: 368 TRQELDDAKSYLKGSKMLALNSSSKLARTLLQHQLDKLPIDYIENYNTIVDAVTLEDARK 427 T QEL +AKSYLKGS+ML+L++SSKLA LLQ+Q D LPIDYIE N IVDAVTL+DA++ Sbjct: 364 TEQELAEAKSYLKGSQMLSLDTSSKLATALLQYQHDNLPIDYIEKRNAIVDAVTLDDAKR 423 Query: 428 VAQRLWGQGLLTVIVGRSPPVAAESAPVPSATTTPSHA 465 A+RLW GLLTVIVGR A++A P T P+ A Sbjct: 424 AAKRLWADGLLTVIVGRP----AQAAVQPPVATPPARA 457 >ref|YP_531272.1| peptidase M16-like [Rhodopseudomonas palustris BisB18] gb|ABD86953.1| peptidase M16-like [Rhodopseudomonas palustris BisB18] Length = 456 Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust. Identities = 289/424 (68%), Positives = 351/424 (82%) Query: 33 SVAAAKIQRLVSPCGVEAWFVKDATVPFIAMEFAFNGGATQDPADKAGVGHMVADLLDEG 92 S AAAKIQRLVSP G+EAWFV DATVP IAME+AF GGATQDPADK+G+GHMVA+LLDEG Sbjct: 29 SFAAAKIQRLVSPGGIEAWFVPDATVPLIAMEYAFGGGATQDPADKSGLGHMVANLLDEG 88 Query: 93 SGDLDSKSFHERLDRRAIELSFGSTRDQFRGALRTLEENADEAFDLLRMALTLPRFDAAD 152 + DLDSK++HERLDRRAIELSF +TRD FRG+LR L+E+ EAFDLLR+ALT PRF+A D Sbjct: 89 AADLDSKTYHERLDRRAIELSFNATRDYFRGSLRMLKEHRSEAFDLLRIALTKPRFEAQD 148 Query: 153 VERIRASLLANLRNDSNNPSSLANRKFLEVAFNDHPYARPAGGTLESVPKIGVTDLKGYV 212 +ER+RA +L+ LR +S NP+S+A+RKFLEVAF DHPY RP+ GTL S+P I DL+ Y Sbjct: 149 IERVRAQVLSTLRRESTNPNSIASRKFLEVAFGDHPYGRPSNGTLASIPTIQADDLRSYA 208 Query: 213 RRVIAKDTLKIAVVGDIQPDVLCGLLDKAFGGLPAKADSVPIRDVVAAKPPQRVFIPLDV 272 V+ KDTLKIAVVGDI L LLD+ FGGLPAKAD V ++ AAKPPQR FI LDV Sbjct: 209 GHVLGKDTLKIAVVGDIDAVSLGALLDQTFGGLPAKADLVAAPEIAAAKPPQRAFIALDV 268 Query: 273 AQTAVTFGGPGVRRSKPDFMAANIVNHVLGGDGLSSRLFREVREKRGLAYSVRQQLVWMN 332 QT VTFGGPG++R+ PDFMA +VNH+LGG LSSRL+ EVREKRGLAYSV + L+WM Sbjct: 269 PQTTVTFGGPGMKRADPDFMAGYVVNHILGGGTLSSRLYHEVREKRGLAYSVYETLLWME 328 Query: 333 HSAVFVGNSGTRANRAGETLEEIEKQVRRIADEGPTRQELDDAKSYLKGSKMLALNSSSK 392 HSA+F+GN+GTRA+RA +T+ I++++RR+A++GPT+QELD+AKSYLKGS+MLAL++SSK Sbjct: 329 HSALFIGNTGTRADRAADTVAAIDEEIRRMAEQGPTQQELDEAKSYLKGSQMLALDTSSK 388 Query: 393 LARTLLQHQLDKLPIDYIENYNTIVDAVTLEDARKVAQRLWGQGLLTVIVGRSPPVAAES 452 LA LLQ+QLDKLPIDYIE N IVDAVTL+DA++ A+RLW GLLTV+VGR+ AAE Sbjct: 389 LASALLQYQLDKLPIDYIEKRNAIVDAVTLDDAKRAAKRLWANGLLTVVVGRAAQAAAEP 448 Query: 453 APVP 456 P Sbjct: 449 VAKP 452