BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0239.0001.p (467 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_040703.1| A [Enterobacteria phage phiX174 sensu lato] >gi... 978 0.0 gb|ABN49622.1| protein A [Enterobacteria phage phiX174] >gi|2269... 977 0.0 gb|ABN49864.1| protein A [Enterobacteria phage phiX174] >gi|1256... 977 0.0 gb|ABN49787.1| protein A [Enterobacteria phage phiX174] 975 0.0 gb|ABN49809.1| protein A [Enterobacteria phage phiX174] 975 0.0 >ref|NP_040703.1| A [Enterobacteria phage phiX174 sensu lato] sp|P03631.1|REPA_BPPHX RecName: Full=Replication-associated protein A; AltName: Full=RepA gb|AAA32570.1| A [Enterobacteria phage phiX174] Length = 513 Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/467 (100%), Positives = 467/467 (100%) Query: 1 MDNRIKLLEEILSFRMQGVEFDNGDMYVDGHKAASDVRDEFVSVTEKLMDELAQCYNVLP 60 MDNRIKLLEEILSFRMQGVEFDNGDMYVDGHKAASDVRDEFVSVTEKLMDELAQCYNVLP Sbjct: 47 MDNRIKLLEEILSFRMQGVEFDNGDMYVDGHKAASDVRDEFVSVTEKLMDELAQCYNVLP 106 Query: 61 QLDINNTIDHRPEGDEKWFLENEKTVTQFCRKLAAERPLKDIRDEYNYPKKKGIKDECSR 120 QLDINNTIDHRPEGDEKWFLENEKTVTQFCRKLAAERPLKDIRDEYNYPKKKGIKDECSR Sbjct: 107 QLDINNTIDHRPEGDEKWFLENEKTVTQFCRKLAAERPLKDIRDEYNYPKKKGIKDECSR 166 Query: 121 LLEASTMKSRRGFAIQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNPNALRDYFRD 180 LLEASTMKSRRGFAIQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNPNALRDYFRD Sbjct: 167 LLEASTMKSRRGFAIQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNPNALRDYFRD 226 Query: 181 IGRMVLAAEGRKANDSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPTGSVDPNFGRRV 240 IGRMVLAAEGRKANDSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPTGSVDPNFGRRV Sbjct: 227 IGRMVLAAEGRKANDSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPTGSVDPNFGRRV 286 Query: 241 RNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKATSYMAVGFYVAK 300 RNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKATSYMAVGFYVAK Sbjct: 287 RNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKATSYMAVGFYVAK 346 Query: 301 YVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKMLTMTNLSTECLI 360 YVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKMLTMTNLSTECLI Sbjct: 347 YVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKMLTMTNLSTECLI 406 Query: 361 QLTKLGYDATPFNQILKQNAKREMRLRLGKVTVADVLAAQPVTTNLLKFMRASIKMIGVS 420 QLTKLGYDATPFNQILKQNAKREMRLRLGKVTVADVLAAQPVTTNLLKFMRASIKMIGVS Sbjct: 407 QLTKLGYDATPFNQILKQNAKREMRLRLGKVTVADVLAAQPVTTNLLKFMRASIKMIGVS 466 Query: 421 NLQSFIASMTQKLTLSDISDESKNYLDKAGITTACLRIKSKWTAGGK 467 NLQSFIASMTQKLTLSDISDESKNYLDKAGITTACLRIKSKWTAGGK Sbjct: 467 NLQSFIASMTQKLTLSDISDESKNYLDKAGITTACLRIKSKWTAGGK 513 >gb|ABN49622.1| protein A [Enterobacteria phage phiX174] gb|ACO94981.1| Protein A [Enterobacteria phage phiX174] gb|ACY07115.1| A [Enterobacteria phage phiX174] gb|ADC55530.1| protein A [Enterobacteria phage phiX174] gb|ADM16572.1| protein A [Enterobacteria phage phiX174] gb|ADM16583.1| protein A [Enterobacteria phage phiX174] gb|ADM16594.1| protein A [Enterobacteria phage phiX174] gb|ADM16605.1| protein A [Enterobacteria phage phiX174] gb|ADM16616.1| protein A [Enterobacteria phage phiX174] gb|ADM16627.1| protein A [Enterobacteria phage phiX174] gb|ADM34346.1| protein A [Enterobacteria phage phiX174] gb|ADM34797.1| protein A [Enterobacteria phage phiX174] gb|ADM34808.1| protein A [Enterobacteria phage phiX174] gb|ADM34819.1| protein A [Enterobacteria phage phiX174] gb|ADM34830.1| protein A [Enterobacteria phage phiX174] Length = 513 Score = 977 bits (2525), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/467 (99%), Positives = 466/467 (99%) Query: 1 MDNRIKLLEEILSFRMQGVEFDNGDMYVDGHKAASDVRDEFVSVTEKLMDELAQCYNVLP 60 MDNRIKLLEEILSFRMQGVEFDNGDMYVDGHKAASDVRDEFVSVTEKLMDELAQCYNVLP Sbjct: 47 MDNRIKLLEEILSFRMQGVEFDNGDMYVDGHKAASDVRDEFVSVTEKLMDELAQCYNVLP 106 Query: 61 QLDINNTIDHRPEGDEKWFLENEKTVTQFCRKLAAERPLKDIRDEYNYPKKKGIKDECSR 120 QLDINNTIDHRPEGDEKWFLENEKTVTQFCRKLAAERPLKDIRDEYNYPKKKGIKDECSR Sbjct: 107 QLDINNTIDHRPEGDEKWFLENEKTVTQFCRKLAAERPLKDIRDEYNYPKKKGIKDECSR 166 Query: 121 LLEASTMKSRRGFAIQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNPNALRDYFRD 180 LLEASTMKSRRGF IQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNPNALRDYFRD Sbjct: 167 LLEASTMKSRRGFTIQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNPNALRDYFRD 226 Query: 181 IGRMVLAAEGRKANDSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPTGSVDPNFGRRV 240 IGRMVLAAEGRKANDSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPTGSVDPNFGRRV Sbjct: 227 IGRMVLAAEGRKANDSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPTGSVDPNFGRRV 286 Query: 241 RNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKATSYMAVGFYVAK 300 RNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKATSYMAVGFYVAK Sbjct: 287 RNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKATSYMAVGFYVAK 346 Query: 301 YVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKMLTMTNLSTECLI 360 YVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKMLTMTNLSTECLI Sbjct: 347 YVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKMLTMTNLSTECLI 406 Query: 361 QLTKLGYDATPFNQILKQNAKREMRLRLGKVTVADVLAAQPVTTNLLKFMRASIKMIGVS 420 QLTKLGYDATPFNQILKQNAKREMRLRLGKVTVADVLAAQPVTTNLLKFMRASIKMIGVS Sbjct: 407 QLTKLGYDATPFNQILKQNAKREMRLRLGKVTVADVLAAQPVTTNLLKFMRASIKMIGVS 466 Query: 421 NLQSFIASMTQKLTLSDISDESKNYLDKAGITTACLRIKSKWTAGGK 467 NLQSFIASMTQKLTLSDISDESKNYLDKAGITTACLRIKSKWTAGGK Sbjct: 467 NLQSFIASMTQKLTLSDISDESKNYLDKAGITTACLRIKSKWTAGGK 513 >gb|ABN49864.1| protein A [Enterobacteria phage phiX174] gb|ABN49875.1| protein A [Enterobacteria phage phiX174] Length = 513 Score = 977 bits (2525), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/467 (99%), Positives = 466/467 (99%) Query: 1 MDNRIKLLEEILSFRMQGVEFDNGDMYVDGHKAASDVRDEFVSVTEKLMDELAQCYNVLP 60 MDNRIKLLEEILSFRMQGVEFDNGDMYVDGHKAASDVRDEFVSVTEKLMDELAQCYNVLP Sbjct: 47 MDNRIKLLEEILSFRMQGVEFDNGDMYVDGHKAASDVRDEFVSVTEKLMDELAQCYNVLP 106 Query: 61 QLDINNTIDHRPEGDEKWFLENEKTVTQFCRKLAAERPLKDIRDEYNYPKKKGIKDECSR 120 QLDINNTIDHRPEGDEKWFLENEKTVTQFCRKLAAERPLKDIRDEYNYPKKKGIKDECSR Sbjct: 107 QLDINNTIDHRPEGDEKWFLENEKTVTQFCRKLAAERPLKDIRDEYNYPKKKGIKDECSR 166 Query: 121 LLEASTMKSRRGFAIQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNPNALRDYFRD 180 LLEASTMKSRRGF IQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNPNALRDYFRD Sbjct: 167 LLEASTMKSRRGFTIQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNPNALRDYFRD 226 Query: 181 IGRMVLAAEGRKANDSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPTGSVDPNFGRRV 240 IGRMVLAAEGRKANDSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPTGSVDPNFGRRV Sbjct: 227 IGRMVLAAEGRKANDSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPTGSVDPNFGRRV 286 Query: 241 RNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKATSYMAVGFYVAK 300 RNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKATSYMAVGFYVAK Sbjct: 287 RNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKATSYMAVGFYVAK 346 Query: 301 YVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKMLTMTNLSTECLI 360 YVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKMLTMTNLSTECLI Sbjct: 347 YVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKMLTMTNLSTECLI 406 Query: 361 QLTKLGYDATPFNQILKQNAKREMRLRLGKVTVADVLAAQPVTTNLLKFMRASIKMIGVS 420 QLTKLGYDATPFNQILKQNAKREMRLRLGKVTVADVLAAQPVTTNLLKFMRASIKMIGVS Sbjct: 407 QLTKLGYDATPFNQILKQNAKREMRLRLGKVTVADVLAAQPVTTNLLKFMRASIKMIGVS 466 Query: 421 NLQSFIASMTQKLTLSDISDESKNYLDKAGITTACLRIKSKWTAGGK 467 NLQSFIASMTQKLTLSDISDESKNYLDKAGITTACLRIKSKWTAGGK Sbjct: 467 NLQSFIASMTQKLTLSDISDESKNYLDKAGITTACLRIKSKWTAGGK 513 >gb|ABN49787.1| protein A [Enterobacteria phage phiX174] Length = 513 Score = 975 bits (2521), Expect = 0.0, Method: Compositional matrix adjust. Identities = 465/467 (99%), Positives = 465/467 (99%) Query: 1 MDNRIKLLEEILSFRMQGVEFDNGDMYVDGHKAASDVRDEFVSVTEKLMDELAQCYNVLP 60 MDNRIKLLEEILSFRMQGVEFDNGDMYVDGHKAASDVRDEFVSVTEKLMDELAQCYNVLP Sbjct: 47 MDNRIKLLEEILSFRMQGVEFDNGDMYVDGHKAASDVRDEFVSVTEKLMDELAQCYNVLP 106 Query: 61 QLDINNTIDHRPEGDEKWFLENEKTVTQFCRKLAAERPLKDIRDEYNYPKKKGIKDECSR 120 QLDINNTIDHRPEGDEKWFLENEKTVTQFCRKL AERPLKDIRDEYNYPKKKGIKDECSR Sbjct: 107 QLDINNTIDHRPEGDEKWFLENEKTVTQFCRKLVAERPLKDIRDEYNYPKKKGIKDECSR 166 Query: 121 LLEASTMKSRRGFAIQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNPNALRDYFRD 180 LLEASTMKSRRGF IQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNPNALRDYFRD Sbjct: 167 LLEASTMKSRRGFTIQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNPNALRDYFRD 226 Query: 181 IGRMVLAAEGRKANDSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPTGSVDPNFGRRV 240 IGRMVLAAEGRKANDSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPTGSVDPNFGRRV Sbjct: 227 IGRMVLAAEGRKANDSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPTGSVDPNFGRRV 286 Query: 241 RNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKATSYMAVGFYVAK 300 RNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKATSYMAVGFYVAK Sbjct: 287 RNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKATSYMAVGFYVAK 346 Query: 301 YVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKMLTMTNLSTECLI 360 YVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKMLTMTNLSTECLI Sbjct: 347 YVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKMLTMTNLSTECLI 406 Query: 361 QLTKLGYDATPFNQILKQNAKREMRLRLGKVTVADVLAAQPVTTNLLKFMRASIKMIGVS 420 QLTKLGYDATPFNQILKQNAKREMRLRLGKVTVADVLAAQPVTTNLLKFMRASIKMIGVS Sbjct: 407 QLTKLGYDATPFNQILKQNAKREMRLRLGKVTVADVLAAQPVTTNLLKFMRASIKMIGVS 466 Query: 421 NLQSFIASMTQKLTLSDISDESKNYLDKAGITTACLRIKSKWTAGGK 467 NLQSFIASMTQKLTLSDISDESKNYLDKAGITTACLRIKSKWTAGGK Sbjct: 467 NLQSFIASMTQKLTLSDISDESKNYLDKAGITTACLRIKSKWTAGGK 513 >gb|ABN49809.1| protein A [Enterobacteria phage phiX174] Length = 513 Score = 975 bits (2520), Expect = 0.0, Method: Compositional matrix adjust. Identities = 465/467 (99%), Positives = 465/467 (99%) Query: 1 MDNRIKLLEEILSFRMQGVEFDNGDMYVDGHKAASDVRDEFVSVTEKLMDELAQCYNVLP 60 MDNRIKLLEEILSFRMQGVEFDNGDMYVDGHKAASDVRDEFVSVTEKLMDELAQCYNVLP Sbjct: 47 MDNRIKLLEEILSFRMQGVEFDNGDMYVDGHKAASDVRDEFVSVTEKLMDELAQCYNVLP 106 Query: 61 QLDINNTIDHRPEGDEKWFLENEKTVTQFCRKLAAERPLKDIRDEYNYPKKKGIKDECSR 120 QLDINNTIDHRPEGDEKWFLENEKTVTQFCRKLAAERPLKDIRDEYNYPKKKGIKDECSR Sbjct: 107 QLDINNTIDHRPEGDEKWFLENEKTVTQFCRKLAAERPLKDIRDEYNYPKKKGIKDECSR 166 Query: 121 LLEASTMKSRRGFAIQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNPNALRDYFRD 180 LLEASTMKSRRGF IQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNPNALRDYFRD Sbjct: 167 LLEASTMKSRRGFTIQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNPNALRDYFRD 226 Query: 181 IGRMVLAAEGRKANDSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPTGSVDPNFGRRV 240 IGRMVLAAEGRKANDSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPTGSVDPNFGRRV Sbjct: 227 IGRMVLAAEGRKANDSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPTGSVDPNFGRRV 286 Query: 241 RNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKATSYMAVGFYVAK 300 RNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKATSYMAVGFYVAK Sbjct: 287 RNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKATSYMAVGFYVAK 346 Query: 301 YVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKMLTMTNLSTECLI 360 YVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKMLTMTNLSTECLI Sbjct: 347 YVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKMLTMTNLSTECLI 406 Query: 361 QLTKLGYDATPFNQILKQNAKREMRLRLGKVTVADVLAAQPVTTNLLKFMRASIKMIGVS 420 QLTKLGYDATPFNQILKQNAKREMRLRLGKVTVADVLAAQPVTTNLLKFMRASIKMIGVS Sbjct: 407 QLTKLGYDATPFNQILKQNAKREMRLRLGKVTVADVLAAQPVTTNLLKFMRASIKMIGVS 466 Query: 421 NLQSFIASMTQKLTLSDISDESKNYLDKAGITTACLRIKSKWTAGGK 467 NLQSFIASMTQKLTLSDISDESKNYLDKAGI TACLRIKSKWTAGGK Sbjct: 467 NLQSFIASMTQKLTLSDISDESKNYLDKAGIITACLRIKSKWTAGGK 513