BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0236.0029.p         (102 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001238115.1| cytochrome c domain-containing protein [Brad...   156   7e-37
ref|YP_001203822.1| putative cytochrome c region [Bradyrhizobium...   147   5e-34
ref|ZP_01012951.1| hypothetical protein 1099457000257_RB2654_093...    59   2e-07
ref|XP_002590746.1| hypothetical protein BRAFLDRAFT_78160 [Branc...    35   3.0  
ref|YP_004110250.1| multi-sensor hybrid histidine kinase [Rhodop...    34   7.6  

>ref|YP_001238115.1| cytochrome c domain-containing protein [Bradyrhizobium sp. BTAi1]
 gb|ABQ34209.1| putative exported protein of unknown function with cytochrome c
           domain [Bradyrhizobium sp. BTAi1]
          Length = 165

 Score =  156 bits (395), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 72/99 (72%), Positives = 83/99 (83%), Gaps = 2/99 (2%)

Query: 1   VTCGRPGTGMPFFVRGSYDTAKCYEMTRQDVADRMPPEANVFLRPNEIEAVADYVLARVK 60
           VTCGRPGTGMP+F RGSYDTAKCY+MTRQDV +RMPPE   FLRPN+IEAVADYVLA +K
Sbjct: 69  VTCGRPGTGMPYFARGSYDTAKCYDMTRQDVGERMPPEGGTFLRPNDIEAVADYVLAHIK 128

Query: 61  GKGEPTYDECIAFFGDGSRVCNIYKEAGHAAAPSGQSEK 99
           G+GEPTYDEC AFFG+ SRVC+IYK   +A  P+ +  K
Sbjct: 129 GRGEPTYDECTAFFGNTSRVCDIYK--ANATKPANEPSK 165


>ref|YP_001203822.1| putative cytochrome c region [Bradyrhizobium sp. ORS 278]
 emb|CAL75585.1| hypothetical protein; putative signal peptide; putative Cytochrome
           c region [Bradyrhizobium sp. ORS 278]
          Length = 165

 Score =  147 bits (371), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 67/99 (67%), Positives = 79/99 (79%), Gaps = 2/99 (2%)

Query: 1   VTCGRPGTGMPFFVRGSYDTAKCYEMTRQDVADRMPPEANVFLRPNEIEAVADYVLARVK 60
           VTCGRPGTGMP+F RGSYDT KCY M+RQ+V +RMPPE   FLRPN+IEAVADYVLA +K
Sbjct: 69  VTCGRPGTGMPYFARGSYDTTKCYGMSRQEVGERMPPEGGTFLRPNDIEAVADYVLAHIK 128

Query: 61  GKGEPTYDECIAFFGDGSRVCNIYKEAGHAAAPSGQSEK 99
           G+GEP YDEC  FFG+ SRVC+IYK   +A  P+ +  K
Sbjct: 129 GRGEPNYDECTTFFGNTSRVCDIYK--ANATQPASEPSK 165


>ref|ZP_01012951.1| hypothetical protein 1099457000257_RB2654_09304 [Maritimibacter
           alkaliphilus HTCC2654]
 gb|EAQ13255.1| hypothetical protein RB2654_09304 [Rhodobacterales bacterium
           HTCC2654]
          Length = 169

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)

Query: 1   VTCGRPGTGMPFFVRGSYDTAKCYEMTRQDV-ADRMPPEANVFLRPNEIEAVADYVLARV 59
           + CG PGT MP+  R +YD   CY M+  D  AD  P     F   ++I+ V  Y+ + V
Sbjct: 84  IRCGLPGTPMPYHSRQAYDGDGCYGMSLDDFDADDKPKRGKTF-GDDDIQNVVAYLQSEV 142

Query: 60  KGKGEPTYDECIAFFGD-GSRVCNIYK 85
            G G+PT++EC AFF +  +  CN  +
Sbjct: 143 IGLGKPTFEECTAFFENPAAAACNSLR 169


>ref|XP_002590746.1| hypothetical protein BRAFLDRAFT_78160 [Branchiostoma floridae]
 gb|EEN46757.1| hypothetical protein BRAFLDRAFT_78160 [Branchiostoma floridae]
          Length = 4443

 Score = 35.4 bits (80), Expect = 3.0,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 8/85 (9%)

Query: 17   SYDTAKCYEMTRQDVADRMPPEANVFLRPNEIEAVADYVLARVKGKGEPTYDECIAFFGD 76
            +YDT +  ++T +D+    P   N+   P    A+ DY+ +R+  KG PT        G 
Sbjct: 3559 TYDTEELIDVTTEDMLSVSPVNLNLLSDPQGGPALGDYLKSRILSKGAPT--------GL 3610

Query: 77   GSRVCNIYKEAGHAAAPSGQSEKAK 101
              +  ++  E  H  +P  +  K K
Sbjct: 3611 TQKAQDVITEIFHRQSPGEKKGKQK 3635


>ref|YP_004110250.1| multi-sensor hybrid histidine kinase [Rhodopseudomonas palustris
           DX-1]
 gb|ADU45517.1| multi-sensor hybrid histidine kinase [Rhodopseudomonas palustris
           DX-1]
          Length = 1157

 Score = 33.9 bits (76), Expect = 7.6,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 1/76 (1%)

Query: 17  SYDTAKCYEMTRQDVADRMPPEANVFLRPNEIEAVADYVLARVKGKGEPTYDECIAFFGD 76
           S+DT   Y  TR  + +        F+RP E + VA +V  R  G G+PTY        D
Sbjct: 100 SFDTFHRYAETRDFLREFPGARGFGFVRPVEPQDVAAFVAQRRAG-GQPTYKVSQLAPHD 158

Query: 77  GSRVCNIYKEAGHAAA 92
           G+R    Y E  H  A
Sbjct: 159 GTRYLVTYLEPSHINA 174