BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0236.0009.p         (131 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_772097.1| hypothetical protein bll5457 [Bradyrhizobium ja...   214   2e-54
ref|ZP_07026863.1| Endoribonuclease L-PSP [Afipia sp. 1NLS2] >gi...   184   5e-45
ref|ZP_03266650.1| Endoribonuclease L-PSP [Burkholderia sp. H160...   175   2e-42
ref|NP_103845.1| translation initiation inhibitor [Mesorhizobium...   120   6e-26
ref|YP_004610978.1| endoribonuclease L-PSP [Mesorhizobium opport...   111   3e-23

>ref|NP_772097.1| hypothetical protein bll5457 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50722.1| bll5457 [Bradyrhizobium japonicum USDA 110]
          Length = 133

 Score =  214 bits (546), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 101/131 (77%), Positives = 114/131 (87%), Gaps = 1/131 (0%)

Query: 1   MKREVVRVEPISSWLERCKAPASPVTRAGNMVFVSGLPPFDPATGEFAAGASMERQSELV 60
           MKRE +RVEPISS+L+R KAP SPVTRAGNM+FV+GLPPFDP TGE A+ A +ERQSE++
Sbjct: 4   MKREALRVEPISSFLDRWKAPTSPVTRAGNMIFVAGLPPFDPDTGEIAS-APIERQSEII 62

Query: 61  MEQLKQCLEAAGATLDNVMKCNVFCTSAKHFTTFNAVYARYFPHQPPARIFVCIPEWTGP 120
           MEQ+K CLE AGA+LDNVMKCNV+CTS KHF  FNAVYARYFP  PPARIFVC PEW  P
Sbjct: 63  MEQMKLCLETAGASLDNVMKCNVYCTSTKHFAAFNAVYARYFPVDPPARIFVCTPEWFAP 122

Query: 121 FDVEIDCIAMV 131
           FDVEIDCIAM+
Sbjct: 123 FDVEIDCIAMM 133


>ref|ZP_07026863.1| Endoribonuclease L-PSP [Afipia sp. 1NLS2]
 gb|EFI51706.1| Endoribonuclease L-PSP [Afipia sp. 1NLS2]
          Length = 131

 Score =  184 bits (466), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 84/130 (64%), Positives = 104/130 (80%), Gaps = 1/130 (0%)

Query: 2   KREVVRVEPISSWLERCKAPASPVTRAGNMVFVSGLPPFDPATGEFAAGASMERQSELVM 61
           KRE++RVEP+S++LER KAP S VTR G+ V+VSG PPFDPATGE    A +ERQ+E+V+
Sbjct: 3   KREIIRVEPLSTYLERWKAPTSAVTRHGDTVYVSGFPPFDPATGE-VIDAPIERQTEIVL 61

Query: 62  EQLKQCLEAAGATLDNVMKCNVFCTSAKHFTTFNAVYARYFPHQPPARIFVCIPEWTGPF 121
           EQ+K CLE AG++LD V+KCNV+CTS + F   NAVYARYFP  PPARIF+ +P W G F
Sbjct: 62  EQMKLCLETAGSSLDKVLKCNVYCTSVEKFAAVNAVYARYFPKDPPARIFINVPAWPGHF 121

Query: 122 DVEIDCIAMV 131
           D+EIDCIA V
Sbjct: 122 DIEIDCIAAV 131


>ref|ZP_03266650.1| Endoribonuclease L-PSP [Burkholderia sp. H160]
 gb|EEA01782.1| Endoribonuclease L-PSP [Burkholderia sp. H160]
          Length = 131

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 81/131 (61%), Positives = 101/131 (77%), Gaps = 1/131 (0%)

Query: 1   MKREVVRVEPISSWLERCKAPASPVTRAGNMVFVSGLPPFDPATGEFAAGASMERQSELV 60
           M RE +RVEP+S++LE+ KAPA  VTR G+ V+VSGLPPFDP TGE    A +ERQ++LV
Sbjct: 1   MPRETIRVEPLSTYLEKLKAPACAVTRHGDTVYVSGLPPFDPKTGE-VVDAPIERQTQLV 59

Query: 61  MEQLKQCLEAAGATLDNVMKCNVFCTSAKHFTTFNAVYARYFPHQPPARIFVCIPEWTGP 120
           +EQLK C+E AG++LD V+KCNV+CTS + F   NAVY  YFP  PPARIFV +P W G 
Sbjct: 60  LEQLKLCVETAGSSLDQVLKCNVYCTSVEKFAAVNAVYQLYFPVDPPARIFVNVPAWPGH 119

Query: 121 FDVEIDCIAMV 131
           FD+EIDC+A V
Sbjct: 120 FDIEIDCVAAV 130


>ref|NP_103845.1| translation initiation inhibitor [Mesorhizobium loti MAFF303099]
 dbj|BAB49631.1| probable translation initiation inhibitor [Mesorhizobium loti
           MAFF303099]
          Length = 130

 Score =  120 bits (302), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 81/130 (62%), Gaps = 1/130 (0%)

Query: 1   MKREVVRVEPISSWLERCKAPASPVTRAGNMVFVSGLPPFDPATGEFAAGASMERQSELV 60
           M +E+V V  +S+ +     P S VTRA  +VFVSG+PP D  TG+   G  +E Q+E  
Sbjct: 1   MTKEIVEVPVLSAAVRALGVPLSLVTRAAGLVFVSGMPPLDLLTGKLVKG-DIEVQTEAS 59

Query: 61  MEQLKQCLEAAGATLDNVMKCNVFCTSAKHFTTFNAVYARYFPHQPPARIFVCIPEWTGP 120
           ++ LK CLEAAG +LDNV+   ++  ++  +   N VYARYFP   P+R FV +  W   
Sbjct: 60  LKALKHCLEAAGTSLDNVVMVRIYAVNSGFYAAINRVYARYFPENAPSRTFVPVASWPME 119

Query: 121 FDVEIDCIAM 130
           FD+EI+C+A+
Sbjct: 120 FDIEIECVAV 129


>ref|YP_004610978.1| endoribonuclease L-PSP [Mesorhizobium opportunistum WSM2075]
 gb|AEH86884.1| Endoribonuclease L-PSP [Mesorhizobium opportunistum WSM2075]
          Length = 130

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/130 (40%), Positives = 76/130 (58%), Gaps = 1/130 (0%)

Query: 1   MKREVVRVEPISSWLERCKAPASPVTRAGNMVFVSGLPPFDPATGEFAAGASMERQSELV 60
           MK+E++ V  +S  +     P S   +A   VF+S  PP D  TGE   G  +E Q+E  
Sbjct: 1   MKKEIIEVPVMSDKVRSLGLPCSTAVKANGFVFISATPPVDMVTGEMVRG-DIETQTEAS 59

Query: 61  MEQLKQCLEAAGATLDNVMKCNVFCTSAKHFTTFNAVYARYFPHQPPARIFVCIPEWTGP 120
           ++ LK CLEAAG +LDNV+   ++  ++  +   N VYARYF   PPAR FV +  W   
Sbjct: 60  LKALKHCLEAAGTSLDNVVMVRIYAVNSGFYNAINRVYARYFSVNPPARSFVPVASWPME 119

Query: 121 FDVEIDCIAM 130
           FD+EI+C+A+
Sbjct: 120 FDIEIECVAV 129