BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0236.0008.p (229 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772096.1| transcriptional regulator [Bradyrhizobium japon... 356 1e-96 ref|YP_782530.1| TetR family transcriptional regulator [Rhodopse... 334 5e-90 ref|YP_001241010.1| TetR family transcriptional regulator [Brady... 331 6e-89 ref|YP_485875.1| TetR family transcriptional regulator [Rhodopse... 321 5e-86 ref|NP_948629.1| TetR family transcriptional regulator [Rhodopse... 320 9e-86 >ref|NP_772096.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC50721.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 223 Score = 356 bits (914), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 175/223 (78%), Positives = 195/223 (87%) Query: 1 MASDQTRSAILAAAERLYADRGFGDVTLRDIVAEANVNLAAVNYHFGSKDELIAELFVTR 60 MASD TRSAILAAAERLYADRGFGDVTLRDIVAEANVNLAAVNYHFGSKDELIAELFV+R Sbjct: 1 MASDHTRSAILAAAERLYADRGFGDVTLRDIVAEANVNLAAVNYHFGSKDELIAELFVSR 60 Query: 61 SIQTNRERLNELRAAEEKGGGRASIEDIMRALVGPTLRGCLGPDREGSTAARFMIRASIE 120 SI TNRERL EL+AAEE+GGGRA IE I+RALVGPTLRGCLGP+ + STAARFMIRASIE Sbjct: 61 SIATNRERLRELKAAEEEGGGRAPIEVILRALVGPTLRGCLGPENQRSTAARFMIRASIE 120 Query: 121 SVPPIRRIKNREVDHLRKFAAAMRRAMPASSDTELYWGLHFALAMAHHTIREKERLLRLS 180 SVPPIRRIKNRE+DHLRKFA AMRR++P SD ++YWGL+FALAMAHHTIRE ERL +LS Sbjct: 121 SVPPIRRIKNREIDHLRKFAGAMRRSLPDRSDVDIYWGLNFALAMAHHTIRESERLTKLS 180 Query: 181 EGKCDLDDVHAIIDRVVTVSVTALTMGDVPSRPAARPVAMHGR 223 EGKCDLDDV ++ RVV+V+ ALT G ++ AR +A R Sbjct: 181 EGKCDLDDVEDVVARVVSVATMALTAGKAETKAPARALARDAR 223 >ref|YP_782530.1| TetR family transcriptional regulator [Rhodopseudomonas palustris BisA53] gb|ABJ07550.1| transcriptional regulator, TetR family [Rhodopseudomonas palustris BisA53] Length = 219 Score = 334 bits (857), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 165/216 (76%), Positives = 187/216 (86%) Query: 1 MASDQTRSAILAAAERLYADRGFGDVTLRDIVAEANVNLAAVNYHFGSKDELIAELFVTR 60 MASD TR+AIL AAERLYADRGF DVTLRDIVA A+VNLAAVNYHFGSKDELIAELFVTR Sbjct: 1 MASDSTRTAILRAAERLYADRGFADVTLRDIVAAADVNLAAVNYHFGSKDELIAELFVTR 60 Query: 61 SIQTNRERLNELRAAEEKGGGRASIEDIMRALVGPTLRGCLGPDREGSTAARFMIRASIE 120 SI TNRERLNEL+AAE GGGRA IE ++RALVGPTLRGCLGP+++ S AARFMIRASIE Sbjct: 61 SIATNRERLNELKAAELAGGGRAPIEAVLRALVGPTLRGCLGPEQQRSDAARFMIRASIE 120 Query: 121 SVPPIRRIKNREVDHLRKFAAAMRRAMPASSDTELYWGLHFALAMAHHTIREKERLLRLS 180 +V PIR+IKNRE+DHLRKFAAAM+R++PA + E+YWGLHFALAMAHHTIR+ ERLLRLS Sbjct: 121 AVAPIRKIKNREIDHLRKFAAAMKRSLPALPEVEIYWGLHFALAMAHHTIRDSERLLRLS 180 Query: 181 EGKCDLDDVHAIIDRVVTVSVTALTMGDVPSRPAAR 216 +GKCDLDD+ II RVV+ +V AL + AAR Sbjct: 181 DGKCDLDDIDGIIARVVSAAVLALGGATKVDKTAAR 216 >ref|YP_001241010.1| TetR family transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ37104.1| transcriptional regulator, TetR family [Bradyrhizobium sp. BTAi1] Length = 223 Score = 331 bits (848), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 162/223 (72%), Positives = 185/223 (82%) Query: 1 MASDQTRSAILAAAERLYADRGFGDVTLRDIVAEANVNLAAVNYHFGSKDELIAELFVTR 60 MA+DQTR+AIL AAERLYA+RGF +VTLRDIVAEANVNLAAVNYHFGSKDELIAELFVTR Sbjct: 1 MATDQTRTAILTAAERLYAERGFSEVTLRDIVAEANVNLAAVNYHFGSKDELIAELFVTR 60 Query: 61 SIQTNRERLNELRAAEEKGGGRASIEDIMRALVGPTLRGCLGPDREGSTAARFMIRASIE 120 SI NRERL ELRAAEE GGGRA I DI+RALVGP LRGCLGP+ + S A+FMIRASIE Sbjct: 61 SIALNRERLRELRAAEEAGGGRADISDILRALVGPILRGCLGPENQRSPVAQFMIRASIE 120 Query: 121 SVPPIRRIKNREVDHLRKFAAAMRRAMPASSDTELYWGLHFALAMAHHTIREKERLLRLS 180 SVPPIRRIK +E+DHLRKFA AMRRA+P S++ +L+WGLHFALAMAHHTIRE ERL +LS Sbjct: 121 SVPPIRRIKTKEIDHLRKFAGAMRRALPDSAEVDLFWGLHFALAMAHHTIRESERLTKLS 180 Query: 181 EGKCDLDDVHAIIDRVVTVSVTALTMGDVPSRPAARPVAMHGR 223 +G+CDLDDV +I RVV +V LT D ++ + A R Sbjct: 181 DGQCDLDDVEDVIARVVRGAVLGLTARDQAAKSKVKVAAREAR 223 >ref|YP_485875.1| TetR family transcriptional regulator [Rhodopseudomonas palustris HaA2] gb|ABD06964.1| transcriptional regulator, TetR family [Rhodopseudomonas palustris HaA2] Length = 221 Score = 321 bits (823), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 152/205 (74%), Positives = 178/205 (86%) Query: 1 MASDQTRSAILAAAERLYADRGFGDVTLRDIVAEANVNLAAVNYHFGSKDELIAELFVTR 60 M++D TR+AIL AAERLYA+RGFGDVTLRDIVA A VNLAAVNYHFGSKDELI ELFVTR Sbjct: 1 MSTDTTRTAILRAAERLYAERGFGDVTLRDIVAAAEVNLAAVNYHFGSKDELITELFVTR 60 Query: 61 SIQTNRERLNELRAAEEKGGGRASIEDIMRALVGPTLRGCLGPDREGSTAARFMIRASIE 120 SI TNRERLNEL+A E GGGRA ++D++RALVGPT+RGCLGPD + S AARFMIRASIE Sbjct: 61 SIATNRERLNELKAVEAAGGGRAPVDDVLRALVGPTMRGCLGPDSQRSDAARFMIRASIE 120 Query: 121 SVPPIRRIKNREVDHLRKFAAAMRRAMPASSDTELYWGLHFALAMAHHTIREKERLLRLS 180 ++P IR+IK RE+DHLRKFAAA+RR++P ++D E+YWGLHFALAMAH T+R+ ERLLRLS Sbjct: 121 AIPAIRKIKTREIDHLRKFAAALRRSLPGTADVEIYWGLHFALAMAHQTVRDSERLLRLS 180 Query: 181 EGKCDLDDVHAIIDRVVTVSVTALT 205 +G CDL+DV I RVV V+ ALT Sbjct: 181 DGACDLNDVDGAIARVVNVAALALT 205 >ref|NP_948629.1| TetR family transcriptional regulator [Rhodopseudomonas palustris CGA009] ref|YP_001992686.1| TetR family transcriptional regulator [Rhodopseudomonas palustris TIE-1] emb|CAE28731.1| possible transcriptional regulator, TetR family [Rhodopseudomonas palustris CGA009] gb|ACF02211.1| transcriptional regulator, TetR family [Rhodopseudomonas palustris TIE-1] Length = 220 Score = 320 bits (821), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 164/215 (76%), Positives = 184/215 (85%) Query: 1 MASDQTRSAILAAAERLYADRGFGDVTLRDIVAEANVNLAAVNYHFGSKDELIAELFVTR 60 M++D TRSAIL AAERLYA+RGFGDVTLRDIVA A VNLAAVNYHFGSKDELIAELFVTR Sbjct: 1 MSTDTTRSAILTAAERLYAERGFGDVTLRDIVAAAGVNLAAVNYHFGSKDELIAELFVTR 60 Query: 61 SIQTNRERLNELRAAEEKGGGRASIEDIMRALVGPTLRGCLGPDREGSTAARFMIRASIE 120 SI TNRERLNEL+AAE GGGRA IE ++RALVGPTLRGCLGPD + S AARFMIRA+IE Sbjct: 61 SIVTNRERLNELKAAEAAGGGRAPIEAVLRALVGPTLRGCLGPDSQRSDAARFMIRAAIE 120 Query: 121 SVPPIRRIKNREVDHLRKFAAAMRRAMPASSDTELYWGLHFALAMAHHTIREKERLLRLS 180 ++PPIR+IKNRE+DHLRKFAAAMRR++P D E+YWGLHFALAMA T+R+ ERLLRLS Sbjct: 121 TIPPIRKIKNREIDHLRKFAAAMRRSLPGKPDAEIYWGLHFALAMAQQTVRDSERLLRLS 180 Query: 181 EGKCDLDDVHAIIDRVVTVSVTALTMGDVPSRPAA 215 EG CDLDDV +IDRVV V+ AL MG V + A Sbjct: 181 EGICDLDDVDGVIDRVVAVASLALKMGTVGTSEVA 215