BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0236.0006.p         (235 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_772095.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicu...   431   e-119
ref|YP_001205076.1| putative acyl-CoA dehydrogenase [Bradyrhizob...   420   e-116
ref|YP_570336.1| acyl-CoA dehydrogenase-like protein [Rhodopseud...   416   e-114
ref|YP_001241009.1| putative acyl-CoA dehydrogenase [Bradyrhizob...   415   e-114
ref|YP_782529.1| acyl-CoA dehydrogenase domain-containing protei...   410   e-113

>ref|NP_772095.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50720.1| bll5455 [Bradyrhizobium japonicum USDA 110]
          Length = 411

 Score =  431 bits (1107), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/219 (94%), Positives = 212/219 (96%)

Query: 1   MAEPAVASSDATNIETRIEKDGDHYVINGRKWWSSGVGDPRCKIAILMGKTDFNAAKHQQ 60
           M EPAVASSDATNIETRIEKDGDHYVINGRKWWSSGVGDPRCKIAILMGKTD  AAKHQQ
Sbjct: 141 MTEPAVASSDATNIETRIEKDGDHYVINGRKWWSSGVGDPRCKIAILMGKTDPKAAKHQQ 200

Query: 61  QSQILVPLDTPGIKVEKMLPVFGFDDAPHGHAQVLLENVRVPKENILLGEGRGFEIAQGR 120
           QSQILVPLDTPGIKVEKMLPVFGFDDAPHGHAQVLL+NVRVPKENILLGEGRGFEIAQGR
Sbjct: 201 QSQILVPLDTPGIKVEKMLPVFGFDDAPHGHAQVLLDNVRVPKENILLGEGRGFEIAQGR 260

Query: 121 LGPGRIHHCMRTIGQAEEALEKMVKRLASRAAFGKKIIEHSVWEQRIGDARTDIEMNRLL 180
           LGPGRIHHCMRTIG+AEEALEKMVKRL+SR AFGKKIIEHSVWEQRIG+ARTDIEMNRLL
Sbjct: 261 LGPGRIHHCMRTIGKAEEALEKMVKRLSSRTAFGKKIIEHSVWEQRIGEARTDIEMNRLL 320

Query: 181 CLKAADMMDKVGNKTAQAEIAMIKVAAPNMALKIIDQAI 219
           CLKAADMMDKVGNK AQ EIAMIKVA PNMALKIIDQAI
Sbjct: 321 CLKAADMMDKVGNKAAQLEIAMIKVAGPNMALKIIDQAI 359


>ref|YP_001205076.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278]
 emb|CAL76839.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278]
          Length = 411

 Score =  420 bits (1080), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 202/219 (92%), Positives = 211/219 (96%)

Query: 1   MAEPAVASSDATNIETRIEKDGDHYVINGRKWWSSGVGDPRCKIAILMGKTDFNAAKHQQ 60
           M EPAVASSDATNIETRI++DGDHYVINGRKWWSSGVGDPRCKIAILMGKTD +AAKHQQ
Sbjct: 141 MTEPAVASSDATNIETRIQRDGDHYVINGRKWWSSGVGDPRCKIAILMGKTDPSAAKHQQ 200

Query: 61  QSQILVPLDTPGIKVEKMLPVFGFDDAPHGHAQVLLENVRVPKENILLGEGRGFEIAQGR 120
           QSQILVPLDTPGIKVEKMLPVFGFDDAPHGHAQVLLENVRVP ENILLGEGRGFEIAQGR
Sbjct: 201 QSQILVPLDTPGIKVEKMLPVFGFDDAPHGHAQVLLENVRVPAENILLGEGRGFEIAQGR 260

Query: 121 LGPGRIHHCMRTIGQAEEALEKMVKRLASRAAFGKKIIEHSVWEQRIGDARTDIEMNRLL 180
           LGPGRIHHCMRTIG+AEE+LEKMV+RL +R AFGKKIIEHSVWEQRIG+ART+IEM RLL
Sbjct: 261 LGPGRIHHCMRTIGKAEESLEKMVRRLMTRTAFGKKIIEHSVWEQRIGEARTNIEMCRLL 320

Query: 181 CLKAADMMDKVGNKTAQAEIAMIKVAAPNMALKIIDQAI 219
           CLKAADMMDKVGNKTAQ EIAMIKVAAPNMALKIID AI
Sbjct: 321 CLKAADMMDKVGNKTAQGEIAMIKVAAPNMALKIIDDAI 359


>ref|YP_570336.1| acyl-CoA dehydrogenase-like protein [Rhodopseudomonas palustris
           BisB5]
 gb|ABE40435.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5]
          Length = 412

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 199/219 (90%), Positives = 207/219 (94%)

Query: 1   MAEPAVASSDATNIETRIEKDGDHYVINGRKWWSSGVGDPRCKIAILMGKTDFNAAKHQQ 60
           M EPAVASSDATNIETRIEKDGDHYVINGRKWWSSGVGDPRCKIAI+MGKTD NAAKHQQ
Sbjct: 141 MTEPAVASSDATNIETRIEKDGDHYVINGRKWWSSGVGDPRCKIAIVMGKTDPNAAKHQQ 200

Query: 61  QSQILVPLDTPGIKVEKMLPVFGFDDAPHGHAQVLLENVRVPKENILLGEGRGFEIAQGR 120
           QSQILVPLDTPGI +EKMLPVFGFDDAPHGH  VL+ENVRVP  N+LLGEGRGFEIAQGR
Sbjct: 201 QSQILVPLDTPGITIEKMLPVFGFDDAPHGHGVVLMENVRVPASNLLLGEGRGFEIAQGR 260

Query: 121 LGPGRIHHCMRTIGQAEEALEKMVKRLASRAAFGKKIIEHSVWEQRIGDARTDIEMNRLL 180
           LGPGRIHHCMRTIG+AEEALEKMVKRL SR AFGKKIIE+S+WEQRI +ARTDIEMNRLL
Sbjct: 261 LGPGRIHHCMRTIGKAEEALEKMVKRLQSRTAFGKKIIEYSIWEQRIAEARTDIEMNRLL 320

Query: 181 CLKAADMMDKVGNKTAQAEIAMIKVAAPNMALKIIDQAI 219
           CLKAADMMDKVGNKTAQ EIAMIKVAAPNMALKIID AI
Sbjct: 321 CLKAADMMDKVGNKTAQLEIAMIKVAAPNMALKIIDNAI 359


>ref|YP_001241009.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gb|ABQ37103.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 411

 Score =  415 bits (1067), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/219 (91%), Positives = 209/219 (95%)

Query: 1   MAEPAVASSDATNIETRIEKDGDHYVINGRKWWSSGVGDPRCKIAILMGKTDFNAAKHQQ 60
           M EPAVASSDATNIETRI +DG HYVINGRKWWSSGVGDPRCKIAILMGKTD +AAKHQQ
Sbjct: 141 MTEPAVASSDATNIETRIVRDGHHYVINGRKWWSSGVGDPRCKIAILMGKTDPSAAKHQQ 200

Query: 61  QSQILVPLDTPGIKVEKMLPVFGFDDAPHGHAQVLLENVRVPKENILLGEGRGFEIAQGR 120
           QSQILVPLDTPGIKVEKMLPVFGFDDAPHGHAQVLLENVRVP ENILLGEGRGFEIAQGR
Sbjct: 201 QSQILVPLDTPGIKVEKMLPVFGFDDAPHGHAQVLLENVRVPAENILLGEGRGFEIAQGR 260

Query: 121 LGPGRIHHCMRTIGQAEEALEKMVKRLASRAAFGKKIIEHSVWEQRIGDARTDIEMNRLL 180
           LGPGRIHHCMRTIG+AEE+LEKMV+RL +R AFGKKIIEHSVWEQRIG+ART+IEM RLL
Sbjct: 261 LGPGRIHHCMRTIGKAEESLEKMVRRLMTRTAFGKKIIEHSVWEQRIGEARTNIEMCRLL 320

Query: 181 CLKAADMMDKVGNKTAQAEIAMIKVAAPNMALKIIDQAI 219
           CLKAADMMDKVGNKTAQ EIAMIKVAAPNMALKIID AI
Sbjct: 321 CLKAADMMDKVGNKTAQGEIAMIKVAAPNMALKIIDDAI 359


>ref|YP_782529.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gb|ABJ07549.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris
           BisA53]
          Length = 411

 Score =  410 bits (1055), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 194/219 (88%), Positives = 205/219 (93%)

Query: 1   MAEPAVASSDATNIETRIEKDGDHYVINGRKWWSSGVGDPRCKIAILMGKTDFNAAKHQQ 60
           M EPAVASSDATNIET+IEKDGDHYVINGRKWWSSGVGDPRCK+AI+MGKTDFNAA+HQQ
Sbjct: 141 MTEPAVASSDATNIETKIEKDGDHYVINGRKWWSSGVGDPRCKVAIVMGKTDFNAARHQQ 200

Query: 61  QSQILVPLDTPGIKVEKMLPVFGFDDAPHGHAQVLLENVRVPKENILLGEGRGFEIAQGR 120
           QSQILVPLDTPGI +EKMLPVFGFDDAPHGH  VLLENVRVP  N+LLGEGRGFEIAQGR
Sbjct: 201 QSQILVPLDTPGITIEKMLPVFGFDDAPHGHGMVLLENVRVPATNLLLGEGRGFEIAQGR 260

Query: 121 LGPGRIHHCMRTIGQAEEALEKMVKRLASRAAFGKKIIEHSVWEQRIGDARTDIEMNRLL 180
           LGPGRIHHCMRTIG+AEEAL KMV+RL SR AFGKKIIE+S+WEQRI +ARTDIEM RLL
Sbjct: 261 LGPGRIHHCMRTIGKAEEALSKMVRRLQSRTAFGKKIIEYSIWEQRIAEARTDIEMTRLL 320

Query: 181 CLKAADMMDKVGNKTAQAEIAMIKVAAPNMALKIIDQAI 219
           CLKAADMMDKVGNKTAQ EIAMIKVAAP MALKIID AI
Sbjct: 321 CLKAADMMDKVGNKTAQLEIAMIKVAAPKMALKIIDDAI 359