BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0236.0003.p (304 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004143086.1| hypothetical protein Mesci_3920 [Mesorhizobi... 317 2e-84 ref|NP_102324.1| hypothetical protein mlr0545 [Mesorhizobium lot... 312 5e-83 ref|YP_004612979.1| hypothetical protein Mesop_4462 [Mesorhizobi... 310 2e-82 ref|ZP_02166783.1| hypothetical protein HPDFL43_10102 [Hoeflea p... 304 1e-80 ref|YP_674120.1| hypothetical protein Meso_1559 [Mesorhizobium s... 292 5e-77 >ref|YP_004143086.1| hypothetical protein Mesci_3920 [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV13036.1| protein of unknown function DUF6 transmembrane [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 306 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 169/306 (55%), Positives = 221/306 (72%), Gaps = 2/306 (0%) Query: 1 LTLSSNLRGSLFMAAAMASFTVNDTITKAVSAELNIGEILLVRGLVAMVLVAALAWYRDA 60 + LS NLRG+LFM AMA FT+ND ITK S +N+ +++L+RG A + V LAW R A Sbjct: 1 MPLSPNLRGALFMMVAMAGFTLNDAITKYSSQSMNMAQVMLIRGAFASLFVGLLAWQRGA 60 Query: 61 LRSFRALLIWPVGLRVLGEIGGTLTYLSAISQIPLANASAIFQALPLVITLGAALVFGEP 120 L ++L V LRV+ E G T+++L A++ +P+AN SA+ QALPL +T+GAALVFGE Sbjct: 61 LARPGSMLQPLVALRVISEAGATVSFLVALAHLPIANVSAVLQALPLAVTMGAALVFGET 120 Query: 121 VGWRRWLAISAGFIGVLVIVRPGAEGFSQAALLALASVGFCAVRDLATRRIPKDLPTVFI 180 VGWRRWLAI+ GF GVL+IVRPG EGFS +L ALASV CAVRDLAT+RIPK +PT+ + Sbjct: 121 VGWRRWLAIAIGFAGVLIIVRPGFEGFSVYSLSALASVACCAVRDLATKRIPKAIPTLLV 180 Query: 181 TLLTTVTVTTAGAVVLVPLGGWRPLSGNALGLLTFAAVLILIGYQCIIVSLRTGDISAVA 240 + T + +T GA +L +GGW P++GN+ LL AAVL++IGYQ II+++R GDIS +A Sbjct: 181 STATALAMTIVGAALLPAMGGWTPMTGNSTALLALAAVLVIIGYQFIIMAMRAGDISFIA 240 Query: 241 PFRYTALPWAMLTGYLAFGHKPDGPMLAGAAIIVASGLYAFYRER--KRDKLRPAATGPG 298 PFRYTAL W++L G F PD PM+ GA II+ SGLYA YRER R K+ +TGP Sbjct: 241 PFRYTALIWSILLGLFIFADIPDLPMIVGATIIIGSGLYALYRERVVGRRKIVAESTGPS 300 Query: 299 LPPDGL 304 + PDG+ Sbjct: 301 MVPDGI 306 >ref|NP_102324.1| hypothetical protein mlr0545 [Mesorhizobium loti MAFF303099] dbj|BAB48110.1| mlr0545 [Mesorhizobium loti MAFF303099] Length = 337 Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 167/306 (54%), Positives = 221/306 (72%), Gaps = 2/306 (0%) Query: 1 LTLSSNLRGSLFMAAAMASFTVNDTITKAVSAELNIGEILLVRGLVAMVLVAALAWYRDA 60 L LS NLRG+LFM AM FT+ND ITK S +N+ +++L+RG A + V LAW R A Sbjct: 32 LPLSPNLRGALFMMVAMVGFTLNDAITKYSSQSMNMAQVMLIRGAFASLFVGLLAWQRGA 91 Query: 61 LRSFRALLIWPVGLRVLGEIGGTLTYLSAISQIPLANASAIFQALPLVITLGAALVFGEP 120 L +L V +RVLGE G T+++L A++ +P+ + SA+ QALPL +T+GAAL FGE Sbjct: 92 LLRPGLMLQPLVAMRVLGEAGATVSFLVALAHLPIGSVSAVLQALPLAVTMGAALFFGEA 151 Query: 121 VGWRRWLAISAGFIGVLVIVRPGAEGFSQAALLALASVGFCAVRDLATRRIPKDLPTVFI 180 VGWRRWLAI+AGF GV+VIVRPG +GF+ +L ALASV C VRDLATRRIP+ PT+ + Sbjct: 152 VGWRRWLAIAAGFAGVMVIVRPGFDGFTIYSLWALASVACCTVRDLATRRIPQTTPTMLV 211 Query: 181 TLLTTVTVTTAGAVVLVPLGGWRPLSGNALGLLTFAAVLILIGYQCIIVSLRTGDISAVA 240 + T + +T GAV+LVP+GGW P++G + LL AAVL+LIGYQ II+++R+G+IS +A Sbjct: 212 STATALAMTVVGAVLLVPMGGWTPMTGKSTALLALAAVLVLIGYQFIIMAMRSGEISFIA 271 Query: 241 PFRYTALPWAMLTGYLAFGHKPDGPMLAGAAIIVASGLYAFYRER--KRDKLRPAATGPG 298 PFRYTAL W++L G + FG PD PM+ GA I+V SGLYA YRER R ++ TGP Sbjct: 272 PFRYTALLWSILLGLIVFGDIPDMPMVVGATIVVGSGLYALYRERVVGRRRIVAETTGPA 331 Query: 299 LPPDGL 304 + PDG+ Sbjct: 332 MAPDGI 337 >ref|YP_004612979.1| hypothetical protein Mesop_4462 [Mesorhizobium opportunistum WSM2075] gb|AEH88885.1| protein of unknown function DUF6 transmembrane [Mesorhizobium opportunistum WSM2075] Length = 306 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 163/306 (53%), Positives = 220/306 (71%), Gaps = 2/306 (0%) Query: 1 LTLSSNLRGSLFMAAAMASFTVNDTITKAVSAELNIGEILLVRGLVAMVLVAALAWYRDA 60 + LS NLRG+LFM AM FT+ND ITK S +N+ +++L+RG A + V LAW R A Sbjct: 1 MPLSPNLRGALFMMVAMVGFTLNDAITKYSSQSMNMAQVMLIRGAFASLFVGLLAWQRGA 60 Query: 61 LRSFRALLIWPVGLRVLGEIGGTLTYLSAISQIPLANASAIFQALPLVITLGAALVFGEP 120 L R +L V +RVL E G T+++L A++ +P+ + SA+ QALPL +T+GAAL FGE Sbjct: 61 LLQPRLMLQPLVAIRVLAEAGATVSFLVALAHLPIGSVSAVLQALPLAVTMGAALFFGEA 120 Query: 121 VGWRRWLAISAGFIGVLVIVRPGAEGFSQAALLALASVGFCAVRDLATRRIPKDLPTVFI 180 VGWRRWLAI+AGF GV++IVRPG +GFS +L ALASV C VRDLATRRIP+ +PT+ + Sbjct: 121 VGWRRWLAIAAGFAGVMIIVRPGFDGFSLYSLWALASVACCTVRDLATRRIPRAIPTMLV 180 Query: 181 TLLTTVTVTTAGAVVLVPLGGWRPLSGNALGLLTFAAVLILIGYQCIIVSLRTGDISAVA 240 + T + +T GA +L P+GGW P++G + LL AAVL+L+GYQ II+++R+G+IS VA Sbjct: 181 STATALAMTVVGAALLAPMGGWTPMTGKSTALLALAAVLVLVGYQFIIMAMRSGEISFVA 240 Query: 241 PFRYTALPWAMLTGYLAFGHKPDGPMLAGAAIIVASGLYAFYRER--KRDKLRPAATGPG 298 PFRYTAL W++L G + FG PD PM+ GA I+V SGLY YRER R ++ +TGP Sbjct: 241 PFRYTALLWSILLGLIVFGDFPDAPMIVGATIVVGSGLYTLYRERVVGRRRIVAESTGPA 300 Query: 299 LPPDGL 304 + PDG+ Sbjct: 301 MAPDGI 306 >ref|ZP_02166783.1| hypothetical protein HPDFL43_10102 [Hoeflea phototrophica DFL-43] gb|EDQ33581.1| hypothetical protein HPDFL43_10102 [Hoeflea phototrophica DFL-43] Length = 300 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 147/292 (50%), Positives = 211/292 (72%) Query: 3 LSSNLRGSLFMAAAMASFTVNDTITKAVSAELNIGEILLVRGLVAMVLVAALAWYRDALR 62 ++ N+RG+LFMA +MA FT+ND+I K ++ E+++ +++ +RG +A VL+ LA + ALR Sbjct: 1 MTPNIRGALFMALSMAGFTLNDSIVKLLTNEMSVAQVMFLRGTIATVLIYLLARQKRALR 60 Query: 63 SFRALLIWPVGLRVLGEIGGTLTYLSAISQIPLANASAIFQALPLVITLGAALVFGEPVG 122 R L V LRV GE+GGT+T+L ++Q+P+ANASAI QALPL +T+GAA+ EPVG Sbjct: 61 PLRLLKDKWVALRVFGEVGGTITFLIGLAQVPIANASAILQALPLAVTMGAAMFLSEPVG 120 Query: 123 WRRWLAISAGFIGVLVIVRPGAEGFSQAALLALASVGFCAVRDLATRRIPKDLPTVFITL 182 WRRWLAI GF GVL+I+RPG EGFS +L+ L +V A RD+ATR+I +P++ I+ Sbjct: 121 WRRWLAILIGFAGVLIIIRPGFEGFSPYSLMILGTVLLAATRDIATRKIDATIPSLLIST 180 Query: 183 LTTVTVTTAGAVVLVPLGGWRPLSGNALGLLTFAAVLILIGYQCIIVSLRTGDISAVAPF 242 +T+ V AG V++VP+GGW P++ + ++ AA L+L+GYQ II+++R G+IS +APF Sbjct: 181 VTSAAVALAGLVLIVPMGGWAPVNATQMSMIAVAACLLLVGYQFIIMAMREGEISFIAPF 240 Query: 243 RYTALPWAMLTGYLAFGHKPDGPMLAGAAIIVASGLYAFYRERKRDKLRPAA 294 RYT L WA+L GYL FG PD M+ G I++ SGL+ YRER R K +PA+ Sbjct: 241 RYTGLLWAVLMGYLLFGEIPDIFMIVGGTIVIGSGLFTLYRERVRSKAKPAS 292 >ref|YP_674120.1| hypothetical protein Meso_1559 [Mesorhizobium sp. BNC1] gb|ABG62955.1| protein of unknown function DUF6, transmembrane [Chelativorans sp. BNC1] Length = 316 Score = 292 bits (747), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 151/306 (49%), Positives = 216/306 (70%), Gaps = 2/306 (0%) Query: 1 LTLSSNLRGSLFMAAAMASFTVNDTITKAVSAELNIGEILLVRGLVAMVLVAALAWYRDA 60 + L++NLRG+L+MA AMA+ T NDT+TK+V ++ +G+++L+RG+VA L+ L + D Sbjct: 1 MALNANLRGALYMAIAMAALTTNDTLTKSVLPQMGMGQVILLRGVVATSLLCILIFRTDG 60 Query: 61 LRSFRALLIWPVGLRVLGEIGGTLTYLSAISQIPLANASAIFQALPLVITLGAALVFGEP 120 S + L + RV EIGGT T++ A++ +PLAN +A+ QALPL +T+GAA+V EP Sbjct: 61 FPSLKFLAHRSILTRVACEIGGTTTFIFALAHLPLANVTAVLQALPLAVTMGAAMVLAEP 120 Query: 121 VGWRRWLAISAGFIGVLVIVRPGAEGFSQAALLALASVGFCAVRDLATRRIPKDLPTVFI 180 VGWRRW AIS GF+GV++IVRPG FS +LLAL +VGFCAVRDL+TR IP+D+P+V + Sbjct: 121 VGWRRWSAISVGFVGVMIIVRPGLGDFSAWSLLALLTVGFCAVRDLSTRLIPQDIPSVGV 180 Query: 181 TLLTTVTVTTAGAVVLVPLGGWRPLSGNALGLLTFAAVLILIGYQCIIVSLRTGDISAVA 240 ++ T+ VT +GA +L GGW+P+ + + A +L+++GYQ +I ++R GDIS +A Sbjct: 181 SVATSAGVTLSGAALLPFTGGWQPVEVPSALSIFLAGILVVVGYQFVIKAMRQGDISFMA 240 Query: 241 PFRYTALPWAMLTGYLAFGHKPDGPMLAGAAIIVASGLYAFYRER--KRDKLRPAATGPG 298 PFRYT+L WA+L G+L FG PD ML G+A++V SGLYA YRER D +T P Sbjct: 241 PFRYTSLLWAILLGFLVFGDVPDALMLFGSALVVGSGLYALYRERIVGHDLPITESTAPA 300 Query: 299 LPPDGL 304 + GL Sbjct: 301 ITTSGL 306