BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0235.0003.p (342 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770487.1| hypothetical protein bll3847 [Bradyrhizobium ja... 581 e-164 ref|YP_001770418.1| amidohydrolase 3 [Methylobacterium sp. 4-46]... 422 e-116 ref|ZP_01444401.1| hypothetical protein 1100011001307_R2601_0053... 400 e-109 ref|YP_485701.1| amidohydrolase [Rhodopseudomonas palustris HaA2... 398 e-109 ref|YP_001418937.1| amidohydrolase 3 [Xanthobacter autotrophicus... 387 e-105 >ref|NP_770487.1| hypothetical protein bll3847 [Bradyrhizobium japonicum USDA 110] dbj|BAC49112.1| bll3847 [Bradyrhizobium japonicum USDA 110] Length = 413 Score = 581 bits (1497), Expect = e-164, Method: Compositional matrix adjust. Identities = 273/335 (81%), Positives = 304/335 (90%) Query: 1 MIAKPAFDLVFRNAVTRSSAAAVDIGIAGGRIAAIAPRLVCEAVEVDLNGRLALPGFVDT 60 M ++ AFDL+FRN + RSSAA VDIG+ GGRIAAI P L CEAVEVD+ G LALPGFVDT Sbjct: 1 MTSQTAFDLIFRNTLLRSSAAPVDIGVKGGRIAAIEPGLTCEAVEVDVGGHLALPGFVDT 60 Query: 61 HIHLDKACLLGRCGHDHASLSEAIRAVSAMKRDFTVEDVYARGSKVIERAITAGTTRMRT 120 HIHLDKACLLGRCGH+H S+SEAIRAV+ MK+DFTVEDVYARG++V+ERAI GTTRMRT Sbjct: 61 HIHLDKACLLGRCGHNHGSVSEAIRAVAGMKKDFTVEDVYARGARVLERAIVHGTTRMRT 120 Query: 121 HVEIDPRIGLRGFEAVKALKRDYAWALDLSLCVFPQEGLTNDPGADELLVAALNDGAEAV 180 HVEIDPRIGLRGFEAVKALKRDYAWA+DLSLCVFPQEGLTNDPGA++LL+ AL DG E + Sbjct: 121 HVEIDPRIGLRGFEAVKALKRDYAWAIDLSLCVFPQEGLTNDPGAEDLLIQALRDGGETI 180 Query: 181 GGCPYVDSDPNAHIARIFDVAQEFDVDVDLHLDFDLDPSWWHMEEVCRQTERCNYHGRVA 240 GGCPY+D+DPN H+ RIF++AQEFDVDVDLHLDFDLDPSWWH++EVCRQTER NY GRVA Sbjct: 181 GGCPYMDTDPNTHLERIFNLAQEFDVDVDLHLDFDLDPSWWHLDEVCRQTERRNYGGRVA 240 Query: 241 IGHATKLSALPPERLKAASTRLAEAGVAVTVLPATDLYLMGRDATHNAPRGLTAAHRLVA 300 +GHATKLSALPPE LKAA+ +LA+AGVAVTVLPATDLYLMGR+ATHNAPRGLT AH+L Sbjct: 241 VGHATKLSALPPEPLKAATAQLAKAGVAVTVLPATDLYLMGREATHNAPRGLTLAHKLAG 300 Query: 301 DGVLCSVATNNVQNPFTPFGDASLLRMANLYANAA 335 DGVLCSVATNNV NPFTPFGDASLLRMAN YAN A Sbjct: 301 DGVLCSVATNNVLNPFTPFGDASLLRMANFYANVA 335 >ref|YP_001770418.1| amidohydrolase 3 [Methylobacterium sp. 4-46] gb|ACA17984.1| Amidohydrolase 3 [Methylobacterium sp. 4-46] Length = 432 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 207/332 (62%), Positives = 249/332 (75%) Query: 7 FDLVFRNAVTRSSAAAVDIGIAGGRIAAIAPRLVCEAVEVDLNGRLALPGFVDTHIHLDK 66 FD +F NA VD+ + GR AA+ P L DL GRL +PGFV+TH+HLDK Sbjct: 3 FDHLFTNARLPGRDGLVDLAVRDGRFAAVEPGLPPNGPSEDLGGRLVIPGFVETHLHLDK 62 Query: 67 ACLLGRCGHDHASLSEAIRAVSAMKRDFTVEDVYARGSKVIERAITAGTTRMRTHVEIDP 126 ACLLGRC S+ EAI AV+A KR FT DVY R +V+ERA+ GTTR+RTHVE+DP Sbjct: 63 ACLLGRCDCGAGSVGEAIAAVTAAKRGFTEADVYERARRVLERAVAQGTTRIRTHVEVDP 122 Query: 127 RIGLRGFEAVKALKRDYAWALDLSLCVFPQEGLTNDPGADELLVAALNDGAEAVGGCPYV 186 RIGL F A++ LK DYAWA+DL LC FPQEGL +DPG +++LVAAL +GA+ VGG PY+ Sbjct: 123 RIGLTSFRALRRLKADYAWAVDLELCAFPQEGLLDDPGCEDVLVAALEEGADLVGGVPYI 182 Query: 187 DSDPNAHIARIFDVAQEFDVDVDLHLDFDLDPSWWHMEEVCRQTERCNYHGRVAIGHATK 246 D D + H+ARIF +A+ FDVD+D HLDFDLDP+W ++EVCR +R + GRVAIGHATK Sbjct: 183 DRDADGHVARIFALARRFDVDIDFHLDFDLDPTWLRLDEVCRWADRTGWGGRVAIGHATK 242 Query: 247 LSALPPERLKAASTRLAEAGVAVTVLPATDLYLMGRDATHNAPRGLTAAHRLVADGVLCS 306 LSALPPE A+ RLA AGVAVTVLPATDL+LMGR+A N PRG+ AAHRL GV CS Sbjct: 243 LSALPPEAFGRAARRLAGAGVAVTVLPATDLFLMGREAACNVPRGVAAAHRLARAGVTCS 302 Query: 307 VATNNVQNPFTPFGDASLLRMANLYANAATLA 338 +ATNNV NPFTP+GDASLLRMANLYAN A ++ Sbjct: 303 IATNNVLNPFTPYGDASLLRMANLYANVAQVS 334 >ref|ZP_01444401.1| hypothetical protein 1100011001307_R2601_00530 [Pelagibaca bermudensis HTCC2601] gb|EAU45432.1| hypothetical protein R2601_00530 [Roseovarius sp. HTCC2601] Length = 407 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 200/333 (60%), Positives = 240/333 (72%) Query: 6 AFDLVFRNAVTRSSAAAVDIGIAGGRIAAIAPRLVCEAVEVDLNGRLALPGFVDTHIHLD 65 + DLV R+A AA VD+G+ GRIA IAP + +A E D G L + GF D+H+HLD Sbjct: 2 SLDLVIRSARLEDGAAPVDLGVKDGRIAEIAPTIASDAPERDAAGGLLIRGFADSHLHLD 61 Query: 66 KACLLGRCGHDHASLSEAIRAVSAMKRDFTVEDVYARGSKVIERAITAGTTRMRTHVEID 125 KAC+L R + L A+ AV+ KRDFT EDVYARG++V+++AI GTT +RT VEID Sbjct: 62 KACILERAQNRSGDLRGALEAVTTAKRDFTTEDVYARGAQVLDKAIGQGTTLIRTQVEID 121 Query: 126 PRIGLRGFEAVKALKRDYAWALDLSLCVFPQEGLTNDPGADELLVAALNDGAEAVGGCPY 185 P IGL GFEAV+ LK DYAWALDL +CVFPQEGL N PG +ELL AAL GA+ +GGCPY Sbjct: 122 PVIGLAGFEAVRRLKADYAWALDLQICVFPQEGLLNYPGTEELLRAALEQGADLLGGCPY 181 Query: 186 VDSDPNAHIARIFDVAQEFDVDVDLHLDFDLDPSWWHMEEVCRQTERCNYHGRVAIGHAT 245 DSDP IARIF +A+ FDVD+D HLDFDLD SW H++EV RQT + GRVAIGH T Sbjct: 182 TDSDPEGQIARIFGMARAFDVDLDFHLDFDLDTSWRHLDEVARQTIAHDMQGRVAIGHVT 241 Query: 246 KLSALPPERLKAASTRLAEAGVAVTVLPATDLYLMGRDATHNAPRGLTAAHRLVADGVLC 305 KLS LPPERL + L +AG+A+TVLPATDL++ GRD H PRG+ AH A GV C Sbjct: 242 KLSMLPPERLAESVALLRDAGIALTVLPATDLFITGRDHDHAVPRGVAPAHVFHAAGVRC 301 Query: 306 SVATNNVQNPFTPFGDASLLRMANLYANAATLA 338 +VATNNV NPFTP+GD SL RMANL+AN L Sbjct: 302 TVATNNVLNPFTPYGDCSLPRMANLFANVTQLG 334 >ref|YP_485701.1| amidohydrolase [Rhodopseudomonas palustris HaA2] gb|ABD06790.1| Amidohydrolase [Rhodopseudomonas palustris HaA2] Length = 411 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 199/337 (59%), Positives = 241/337 (71%), Gaps = 2/337 (0%) Query: 7 FDLVFRNA-VTRSSAAAVDIGIAGGRIAAIAPRL-VCEAVEVDLNGRLALPGFVDTHIHL 64 FDL+ RNA V A+DIGI GR AAI L A E D GRL +PGFV+THIHL Sbjct: 3 FDLILRNAAVVDRPETALDIGIKAGRFAAIEAGLPATGAPEHDCGGRLVVPGFVETHIHL 62 Query: 65 DKACLLGRCGHDHASLSEAIRAVSAMKRDFTVEDVYARGSKVIERAITAGTTRMRTHVEI 124 DK+CLLGRC + +L EAI V KR FT EDVY R S+ +E+AI GT +MRTHVE+ Sbjct: 63 DKSCLLGRCNCEKGTLDEAIAEVVKAKRGFTEEDVYQRASQTLEKAIKNGTNQMRTHVEV 122 Query: 125 DPRIGLRGFEAVKALKRDYAWALDLSLCVFPQEGLTNDPGADELLVAALNDGAEAVGGCP 184 DPR+GL F A+K LK DYAWA+DL LCVFPQEGL +DPG D +++ AL +GA+ VGG P Sbjct: 123 DPRVGLTSFRALKQLKLDYAWAIDLQLCVFPQEGLLDDPGCDAVMLQALREGADVVGGAP 182 Query: 185 YVDSDPNAHIARIFDVAQEFDVDVDLHLDFDLDPSWWHMEEVCRQTERCNYHGRVAIGHA 244 Y+D D + I RIF++A++F VD+D HLDF LDP+ ++EVCR + + GRVAIGH Sbjct: 183 YMDKDSHGQIGRIFEMAKQFGVDIDFHLDFGLDPAHLDLDEVCRMADATGWGGRVAIGHV 242 Query: 245 TKLSALPPERLKAASTRLAEAGVAVTVLPATDLYLMGRDATHNAPRGLTAAHRLVADGVL 304 TKLSA+P AA+ RLA+AGVAVTVLPATDL+L GRDA N PRG+T AH L GV Sbjct: 243 TKLSAMPKAAFDAAAKRLADAGVAVTVLPATDLFLTGRDAEFNVPRGVTPAHWLRHHGVN 302 Query: 305 CSVATNNVQNPFTPFGDASLLRMANLYANAATLAPAA 341 CS++TNNV NPFTPFGD SL+RM NLYAN +A A Sbjct: 303 CSISTNNVLNPFTPFGDCSLIRMINLYANITQVAATA 339 >ref|YP_001418937.1| amidohydrolase 3 [Xanthobacter autotrophicus Py2] gb|ABS69280.1| Amidohydrolase 3 [Xanthobacter autotrophicus Py2] Length = 413 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 189/328 (57%), Positives = 239/328 (72%), Gaps = 1/328 (0%) Query: 7 FDLVFRNA-VTRSSAAAVDIGIAGGRIAAIAPRLVCEAVEVDLNGRLALPGFVDTHIHLD 65 DL+ +NA + + VDI IA GRI A+AP + +A VD G L PGFV+THIHLD Sbjct: 1 MDLIVKNARLPDAPDRIVDIAIAAGRIEAVAPDITADAEVVDAGGCLVAPGFVETHIHLD 60 Query: 66 KACLLGRCGHDHASLSEAIRAVSAMKRDFTVEDVYARGSKVIERAITAGTTRMRTHVEID 125 K+C+L RC L EAI V+ K+DFT +DVYARG + IE+AI GTT MRTH+E+D Sbjct: 61 KSCILDRCASRRGDLEEAIAEVARAKKDFTPQDVYARGRRTIEKAIAQGTTHMRTHLEVD 120 Query: 126 PRIGLRGFEAVKALKRDYAWALDLSLCVFPQEGLTNDPGADELLVAALNDGAEAVGGCPY 185 P IGLRGFE V L DY WA+D+ +CVFPQEGLTN+PG DEL+V AL GA+AVG PY Sbjct: 121 PGIGLRGFEGVMQLVEDYRWAMDIEVCVFPQEGLTNNPGTDELMVEALRRGAKAVGAAPY 180 Query: 186 VDSDPNAHIARIFDVAQEFDVDVDLHLDFDLDPSWWHMEEVCRQTERCNYHGRVAIGHAT 245 D+DP+ I R+F++A++FDVD+D+HLDF DP+ ++ VC TER + GRVAIGH T Sbjct: 181 TDTDPHGQIDRVFEMARDFDVDIDMHLDFGADPTALDLDHVCALTERFGWGGRVAIGHVT 240 Query: 246 KLSALPPERLKAASTRLAEAGVAVTVLPATDLYLMGRDATHNAPRGLTAAHRLVADGVLC 305 KL+ + PERL +TR+ +AGVA+TVLP+TDL+LMGRD T RG+T AH+++ GV C Sbjct: 241 KLAYVEPERLAEIATRMRDAGVALTVLPSTDLFLMGRDRTSAKTRGVTPAHQMLKHGVNC 300 Query: 306 SVATNNVQNPFTPFGDASLLRMANLYAN 333 S++TNNV NPFTPFGD S LRMANL AN Sbjct: 301 SLSTNNVLNPFTPFGDCSQLRMANLNAN 328